Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00866 ATGACTACCCACATTGATAACCTCTGGATTTTCGCTCTTGCTTCCAAATTCACACATGAAAACATTGTTTACTCACTTTTGATCATGGCTTTACTCTGGCTAACCATGACTTTCTTTTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGAAAGTACTATtattccaacaacaacaaaaaccaaaacaaaaacaacaacaacaacaaccttaaTTCCTCATCTCAAATATTCATTCCTGGTCCAAAAGGGTACCCTTTAATTGGAAGCATGAATCTCATGTCTTCTTCACTAGCACACCAAAGAATTGCTTCTACAGCTAAAACATGCAAAGCTACAAGACTCATGGCTTTTAGTCTAGGAGACACACGTGCCATAGTCACGTGCAATCCTGATGTTGCCAAAGAGATTCTTCATAGCTCTGTTTTCGCTGATCGTCCTATTAAAGAATCTGCTTACTCTCTTATGTTCAATAGAGCAATTGGTTTTGCTCCTTATGGTGTTTATTGGAGAACCCTTCGAAAAATTTCAACTAATCATCTTTTCTCACCCATGCAAATCAAATCATCTGGGCCGCAAAGAACTGAAATTGCAACCCAGATGATTGATTTGTTTCGTACTCGAAACCGCAGTTCTGTCTGCGGTTTCGGTGTTCGCGATGTTTTGAAGAGAGCATCGCTGAACAACATGATGTGCTCTGTTTTTGGACAGAGGTTTAAGATTGATGAAGTTAATGAGAAAATGATGGAACTTGGTGGATTAGTTGAACAAGGTTATGATTTATTGGGTAGTCTTAATTGGGGTGATCATTTACCTTTTTTGAAAGATTTTGATGTTCAGAAAATCCGGTTCAATTGTTCTGAATTAGTTCCTAAAGTGAACCGGTTTGTTGGTTCAATTATTTCCGACCATCGAGCCGACAAAAACcaaaccaataaggattttgttcatGTCTTGCTCAATCTTCAAGAACCAGATAAATTGTCTGACTCCGACATGGTTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGACACAGTGGCTGTTTTGATAGAATGGATACTAGCGAGGTTGGTGCTTCATCCAGACGTGCAAAGGAAGGTACAAAAGGAGCTTGATGAGGTGGCAACCGGAGATGCACGTGTGTTTACGGAGGAGGATGTGGCGGTAACGGTTTATTTACCTGCTGTGATTAAGGAGGTTCTAAGGCTACATCCACCGGGTCCACTACTTTCGTGGGCCCGATTAGCCATCACTGATACGACAATTGATGGGTATCACATACCAGTGGGGACTACAGCCATGGTAAACATGTGGGCCATAGCTAGGGACCCAAATGTGTGGAGGGACCCACTTGAATTTAATCCCGATAGGTTTGTGAATGAAGAGGCAGAATTTTCGGTTCTTGGATCGGATCTAAGGTTGGCTCCATTTGGATCGGGTAGGAGAAGTTGTCCGGGGAAGAATTTAGGTTTAAGTACCGTAACTTTTTGGGTTGCTAAGCTTTTGCAAGAGTTTGAATGGCTACCGTTGGATGATGGGAATGGCGGCGTTGATTTAACGGAAGTGCTAAGGCTTTCGTGTGAAATGGCTAACCCTCTTACTGTACAAGTGCGCCCGAGGCGTTAG 1629 0.4113 MTTHIDNLWIFALASKFTHENIVYSLLIMALLWLTMTFFYWSHPGGPAWGKYYYSNNNKNQNKNNNNNNLNSSSQIFIPGPKGYPLIGSMNLMSSSLAHQRIASTAKTCKATRLMAFSLGDTRAIVTCNPDVAKEILHSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKISTNHLFSPMQIKSSGPQRTEIATQMIDLFRTRNRSSVCGFGVRDVLKRASLNNMMCSVFGQRFKIDEVNEKMMELGGLVEQGYDLLGSLNWGDHLPFLKDFDVQKIRFNCSELVPKVNRFVGSIISDHRADKNQTNKDFVHVLLNLQEPDKLSDSDMVAVLWEMIFRGTDTVAVLIEWILARLVLHPDVQRKVQKELDEVATGDARVFTEEDVAVTVYLPAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHIPVGTTAMVNMWAIARDPNVWRDPLEFNPDRFVNEEAEFSVLGSDLRLAPFGSGRRSCPGKNLGLSTVTFWVAKLLQEFEWLPLDDGNGGVDLTEVLRLSCEMANPLTVQVRPRR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00866 542 SUPERFAMILY Cytochrome P450 78 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PANTHER CYTOCHROME P450 78A6 1 542 - -
Tsu08g00866 542 PRINTS E-class P450 group I signature 224 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PANTHER CYTOCHROME P450 78A7-RELATED 1 542 - -
Tsu08g00866 542 Gene3D Cytochrome P450 63 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00866 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Tsu08g00866 542 Pfam Cytochrome P450 79 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00866 Tsu-Chr8 9471626 9473967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00866 1 542 Cytochrome P450 AT2G46660 62.523 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00866 K20619 - gmx:100798388 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00866 08 9471626 9473967 Tsu08g00866 08 9471626 9473967 ECH