Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00855 ATGGAGATTATTGGAAATGATGCTATGATTAGAGTTCAATCAGAGAATGTTAATCATCCTGGTGCAAGATTAATGAGTGCATTGAAGGATTTGGAGTTCCAAGTACATCATGCTAGTATATCTTGTGTTAATGAAGTTATGGTTCAAGATGTTGTTGTTCAAGTTCCAAAAGAGATGAGGAATGAAGAGAGTCTTAAATCTGCAATTCTCATGAGATTAGATGAtcaagaatga 234 0.3291 MEIIGNDAMIRVQSENVNHPGARLMSALKDLEFQVHHASISCVNEVMVQDVVVQVPKEMRNEESLKSAILMRLDDQE 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00855 77 PANTHER MYC 2 73 IPR045084 GO:0003700|GO:0006355
Tsu08g00855 77 PANTHER TRANSCRIPTION FACTOR BHLH14 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00855 Tsu-Chr8 9296400 9298061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00855 1 73 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 47.945 1.62e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00855 - K13422 gmx:100804965 111.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00855 08 9296400 9298061 Tsu08g00855 08 9296400 9298061 ECH