Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00842 ATGGATTTATCAGTTATGCCAAAAGCATTCTCAAATCAACATAGTTGGTATGAATCCACTTTTTCTCAAGTTACTACTACCAACAATATTCTCAAGTCTACCTCTTctaaaatcatatatacatacaataaTGTTATGAATGGTTTTAGCGCAAATCTATCGCCGGAAGAGCACGAAGCTCTCAAAACCTCCCCCGGTTACATTTCTTCAATACCTGATTTACCCGTGAAACTTGACACAACACACTCACCTCAATTCCTTGGCCTTAATCCCTACAAAGGGGCATGGCCAGCTTCGAATTTTGGTAAAGATGTAATTGTTGGTGTAATAGACAGCGGTGTTTGGCCAGAAAGTGAAAGTTTCAACGATAATGGAATGACCAAAATACCCAAAAAATGGAAAGGTCAATTATGTCAATTTGAAAATAccaaaaattcatctttttgCAACAAGAAACTTATTGGAGCTAAATTCTTCAACAAAGGGTTCTCGGCGAAATATCCAGGTGAAAAAATTGAGAACTCCACACGGGACATGAACGGTCATGGGACACACACTTCAACAACAGCAGCAGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCTAGTGGAGTAGCTTCATCGTCTAGAGTCGCCATCTACAAGACTGTGTGGGGACCAAATGCAGATGCAGTTTCATCTGATATAATAGCTGCAATTGATGCTGCAATATCAGACGGTGTTGATGTTCTTTCAATATCATTAGGCTATAACAATTTGCCATTGTATGAAGATGCTTTTGCTATAGCAACATTTGCAGCTATGGAAAATGGTATTTTTGTGTCTACTTCGGGAGGTAATAGCGGAGCTTCACTTAAAACTCTACACAATGGAACACCATGGGTGATTACTGTTGCGGCTGGTACTTTGGATCGCGAATCTAATGGGAATCTTACACTTGGAAATGGAGTCTCACTCACCGGCTTCGCTACTTATATAGGAAACTTCTCTGATAGTAATCTTCCAATTGTTTTTATGGGTGCGTGTGACAATTATACGGAACTAATCAAAGTGAAAAGCAAAATTGTGGTTTGTGAAGACAAGGATGGAACTCTTTACAGTCATGTTTATAATTTGGTTGAAGCAGAAGTTGTTGGAGCTGTTTTCATATCAAACGACACGTCAAAAATCCTTAAGTACTCGTTTCCATCGATCACTATTAACCAGAAAAATGGTGAAATTGTCAAAGATTACATACAGAGTTGTTCTAACTCTAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGGTGCTAAACCAGCACCTAGTGTGGATTCTTATAGTTCACGAGGGCCTTCAAATAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCCGGTACATCAATCTTAGCTGCATGGCCTGCAAATATTCCTGTGTTGAATTTTGGGTCTGGTGAAATCTTCAACAAGTTCAATTATTTAACTGGAACATCCATGGCGTGTCCTCATGTTGCCGGTGTTGGAGCACTTTTGAAAGGAGCACATGCTGATTGGAGCCCTGCGGCTATTAGATCAGCAATGATGACAACATCCGACATACTTGATAATACTAAGAAACCCATCAAAGACATTGGAACAGGTAACAAAGTTGCAACTCCGCTTGCATTGGGAGCTGGTCATATCAACCCTAATAGAGCACTTGACCCCGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAGAAAACATCGCTTCCATTACAAGATCCTCTACCAATGATTGTTCTAAACCTTCCTTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCAATGCGGAAAACTCTTCTTCAACGACATCCCAAGAATTTAGCAGAACAGTGACCAATGTTGGCgaggaaaaaacaacttatgttGCTAGCATTACTCCAATTGAAGGGTTCAATGTCACTGTTATCCCTGATAAATTGGTGTTCCGTAAGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATTGAAGGTCCAAGAATGACACTAGAGGATGAAGTAGCTTTTGGCTACCTCAACTGGAAGAATGAGAAGCATGTGGTGAGGAGCCCTATTGTGGTAACCAATATCCAGAATGAGAAGCATGTGGCAGAATGA 2184 0.3892 MDLSVMPKAFSNQHSWYESTFSQVTTTNNILKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPGYISSIPDLPVKLDTTHSPQFLGLNPYKGAWPASNFGKDVIVGVIDSGVWPESESFNDNGMTKIPKKWKGQLCQFENTKNSSFCNKKLIGAKFFNKGFSAKYPGEKIENSTRDMNGHGTHTSTTAAGSRVDGASFFGYANGTASGVASSSRVAIYKTVWGPNADAVSSDIIAAIDAAISDGVDVLSISLGYNNLPLYEDAFAIATFAAMENGIFVSTSGGNSGASLKTLHNGTPWVITVAAGTLDRESNGNLTLGNGVSLTGFATYIGNFSDSNLPIVFMGACDNYTELIKVKSKIVVCEDKDGTLYSHVYNLVEAEVVGAVFISNDTSKILKYSFPSITINQKNGEIVKDYIQSCSNSSSIAKMSFKITSFGAKPAPSVDSYSSRGPSNSCPYVLKPDITGPGTSILAAWPANIPVLNFGSGEIFNKFNYLTGTSMACPHVAGVGALLKGAHADWSPAAIRSAMMTTSDILDNTKKPIKDIGTGNKVATPLALGAGHINPNRALDPGLVYDVGVQDYVNLLCALNFTQENIASITRSSTNDCSKPSLDLNYPSFIAFFNAENSSSTTSQEFSRTVTNVGEEKTTYVASITPIEGFNVTVIPDKLVFRKKNEKLSYKLRIEGPRMTLEDEVAFGYLNWKNEKHVVRSPIVVTNIQNEKHVAE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00842 727 Pfam Fibronectin type-III domain 614 716 IPR041469 -
Tsu08g00842 727 CDD Peptidases_S8_3 76 535 IPR034197 -
Tsu08g00842 727 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 79 IPR037045 -
Tsu08g00842 727 Gene3D - 587 719 - -
Tsu08g00842 727 ProSiteProfiles Serine proteases, subtilase domain profile. 86 570 - -
Tsu08g00842 727 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Tsu08g00842 727 PANTHER PUTATIVE-RELATED 1 721 - -
Tsu08g00842 727 Gene3D Peptidase S8/S53 domain 104 583 IPR036852 GO:0004252|GO:0006508
Tsu08g00842 727 CDD PA_subtilisin_like 316 429 - -
Tsu08g00842 727 PRINTS Subtilisin serine protease family (S8) signature 102 121 IPR015500 -
Tsu08g00842 727 PRINTS Subtilisin serine protease family (S8) signature 178 191 IPR015500 -
Tsu08g00842 727 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Tsu08g00842 727 Pfam Peptidase inhibitor I9 8 78 IPR010259 -
Tsu08g00842 727 Gene3D - 310 438 - -
Tsu08g00842 727 Pfam Subtilase family 102 539 IPR000209 GO:0006508|GO:0008236
Tsu08g00842 727 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 721 IPR045051 -
Tsu08g00842 727 SUPERFAMILY Subtilisin-like 78 574 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00842 Tsu-Chr8 9149021 9151204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00842 1 722 Subtilisin-like Serine Gene Family AT5G67090 43.758 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00842 - - gmx:100786751 917.916