Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00840 ATGAACAATAAGGTTTCACGGAGGCCACGTACTAGAGTAGGAAAATATGAAATGGGAAAAACAATTGGTGAAGGAAGTTTTGCGAAAGTGAAGTTAgcaaaaaatgttgaaaatggAAATTATGTTGCCATGAAAATTCTTGATCGTAATCATGTTCTTCGCCACCATATGGCGGAACAgCTGGGTAGAGAAATTTCAACTATGAAGATGATTAATCATCCAAACGTTGTCAAAATACATGAGGTAATGGCAAGCAAAACAAAGATTTACATTGTCTTAGAGTTAGTTAAAGGAGGAgaactatttgacaaaattGCTAAGAATGGGAAACTTAAAGAGGATGAAGCAAGAAGTTATTTCCATCAACTAATGAATGCAGTTGATTATTGCCATAGTAGAGGTGTTTATCACAGAGATTTGAAGCCAGAGAATCTTCTTTTGGACAATAATGGTGTTCTTAAAATTACAGATTTTGGATTAAGTACATACTCACAGCAGGAGGATGAACTTCTCCGCACGGCATGCGGAACACCGAATTACGTTGCTCCTGAGGTAGTGCTTAATGACAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCTTGTGGAGTCATTCTCTTTGTACTAATGGCTGGCTACTTACCGTTCGACGAGACGAATCAAATGACACTTTTTAAGAAAATTGGTAAGGCTGAGTTCACATTTCCGCCTTGGTTTTCTGCCGAGGCAAAGAAACTGCTCAAGGCTATACTTAACCCGAACCCTCAAACTAGGATAAAAATTTCGGAAATCTTGGAAGATGAATGGTTCAAAAAAGGATACAAGCCGGCAGCTTTTACGGAGGAAGATGATGTCAATGTAGATGATGTTGCTGCTGCCTTCAATGATTCTAAGGAAAATCTCGTGAGAGAGACTAAAGAGAAACCCGTATCGATGAATGCTTTTGAGCTCATTTCTAGATCTGAAAGCTTTAATCTTGGCAATATGTTTGAGATGGAGCAAAAGGGTGTTGTAAAGCGCGAAACACATTTCACTTCCCAGCGCCCCCCAAATGAAATTATGTCTAAAATTGAGGAGGCTGCTAAACCTCTCGGATTTAACGTTCACAAGCGAGATTACAAGATGAAGCTGCAAGGTGATAAAAGTGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAAGTGGCTCCGTCGTTGCATATGGTGGAGCTACGAAAGACGGGCGGTGACACACTAGAGTTTCACAAGTTCTACAAAACATTTTCATCAGGGTTGCAAGACATAGTGTGGCACAATGAGAGTATCAAAgaataa 1320 0.3902 MNNKVSRRPRTRVGKYEMGKTIGEGSFAKVKLAKNVENGNYVAMKILDRNHVLRHHMAEQLGREISTMKMINHPNVVKIHEVMASKTKIYIVLELVKGGELFDKIAKNGKLKEDEARSYFHQLMNAVDYCHSRGVYHRDLKPENLLLDNNGVLKITDFGLSTYSQQEDELLRTACGTPNYVAPEVVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDETNQMTLFKKIGKAEFTFPPWFSAEAKKLLKAILNPNPQTRIKISEILEDEWFKKGYKPAAFTEEDDVNVDDVAAAFNDSKENLVRETKEKPVSMNAFELISRSESFNLGNMFEMEQKGVVKRETHFTSQRPPNEIMSKIEEAAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDIVWHNESIKE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00840 439 SUPERFAMILY Protein kinase-like (PK-like) 13 290 IPR011009 -
Tsu08g00840 439 Pfam NAF domain 309 370 IPR004041 GO:0007165
Tsu08g00840 439 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00840 439 CDD CIPK_C 313 427 - -
Tsu08g00840 439 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Tsu08g00840 439 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Tsu08g00840 439 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00840 439 Gene3D Transferase(Phosphotransferase) domain 1 96 298 - -
Tsu08g00840 439 Gene3D Kinase associated domain 1, KA1 306 433 - -
Tsu08g00840 439 PANTHER - 8 434 - -
Tsu08g00840 439 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00840 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 434 - -
Tsu08g00840 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Tsu08g00840 439 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00840 Tsu-Chr8 9132853 9136776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00840 4 439 CBL-interacting serine-threonine protein kinases AT1G01140 72.009 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu08g00840 Pkinase 7.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00840 - - gmx:100791002 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00840 08 9132853 9136776 Tsu08g00841 08 9143431 9148527 PCT