Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00830 ATGGATTTATCAGTTATGCCAAAAGCATTCTCAAATCAACATAGTTGGTATGAATCCACTTTTTCTCAAGTTACTACTACCAACAATATTCTCAAGCCTACCTCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCCCCGGAAGAGCATGAAGCTCTCAAAACCTCCCCAGGTTATATTTCTTCAGTGCTTGATTTACCCTTGAATCTTGACACAACACACTCACCTCGATTCCTTGGCCTTAATCCCAAAAATGGAGCATGGAAAGCTTCGAAGTTTGGTAAAGATGTAATTGTTGGTGTGATTGACACCGGTGTTTGGCCAGAAAGTGAAAGTTTCAACGATCATGGAATGACTAAAATTCCTTCTAAATGGAAAGGTCAATTATGTCAATTTGAAAATACAAACAATTCGTCGTTTTGCAATAAGAAACTCATTGGAGCTAGATTCTTCAACAAAGGGTTCTTggcaaaattttcaaacataagTACAACAATTGTGAACACCACACGTGACGAACATGGTCATGGGACTCACACTTCAACAACAGCAGCAGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCTAGTGGAATAGCTTCATCGTCTAGAGTCGCCATATACAAGACTGTGTGGGGACCAGATGCAGATGCAGTATCATCTGATGTAATAGCTGCAATTGATGCCGCAGTAGCAGATGGTGTTGATATTCTTTCAATATCACTAGGCTATAACAATTTGCCTTTGTATGAAGATGGTTTTGCAATAGCAACATTTGCAGCAATGGAAAAAGGTGTTTTTGTTTCTACTTCAGCAGGTAATAATGGTCCTTCCTTTAAATCTCTTCATAATGGAACACCATGGGTGATAACTGTTGCGGCTGGCACTCAAAATCGCGAATTTCGTGGGAATCTTAAACTTGGTAATGGTGTCTCAGTCACTGGTTTCGCTTCTTATCTAGGAAACTTCTATGATAGTAATATTCCAATTGTTTTCATGGGTACGTGCGATAATATTACTGAACTAATCAAAGTGAATAGAAAGATTGTGGTTTGTGAAAACAATAATGGTGCTCTTTCTAGCCGATTTTTTAACGTGGTTGAAGCAAAAGTTGTTGGAGCTGTTTTCATAGCAAACCCATCACAAAATGAACTATCACAACTCTTATGGTACCCATTTCCATTCATCATTGTTAATCAGAGATATGGAAAAATTGTCAAAGATTACATAAAAAGTAATAACTCTAGTTCAGTAGCAAAATTATCTTTCAAAATAACATCTTTTGGTGTTAAACCAGCACCTAGTCTGGATGATTATAGTTCAAGAGGGCCTTCAGAGAGTTGTCCATATGTTTTGAAACCCGACATTACAGGTCCAGGTACATCAATCTTAGCTGCATGGCCTACAAATATTCCTGTGTTGAGTTATGGGTCTCAAAAAGTCTTCAAcaagttcaattttttaactGGAACATCAATGGCATGCCCTCATGTTGCCGGTGTAGGAGCACTTTTGAAAGGAGTACATCGTGATTGGAGTCCTGCAGCTATTAGATCGGCAATGATGACAACATCAGACATACTTGATAATACTAAGAAACCCATCAAAGACATTGGAAAAGGTAACAAAGTTGCAACTCCGCTTGCATTGGGAGCCGGTCACATCAACCCGAATAGAGCACTTGACCCGGGTCTTGTTTACGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCGCTTAACTTTACACAGAAAAACATCACTGCCATTACACGATCCTCTTTCAATGATTGCTCTAAACCTTCATTGGATCTCAATTACCCTTCTTTTATTGCTTTCTTCAAGGCTGGAAATTTTTCTTCGAAAACAACACAACATTTTCATAGAACAGTTACCAATGTTGGTAAAAGTCGAACGACTTATGTTGCTAGCATTACTCCAATTAAAGGGTTTCGTCTCAACGTTATCCCAAATAAATTAGTGTTCAAGAAGAAGAACCAGAAGATAAGTTATAGGTTGAGCATTGAAGGTCCAAGAATGATACAAAAGAACATAGAATCTTTTGGATATCTCACTTGGAAGGATGGGAAGCATGTGGTTAGGAGCCCTATTGTGGGTATTCAACTTCTCATTTTCACTCTCTCAGTTCTCAGTGTCCTCAGCTGTGACCCATTTCGCTCAATTTCATCACTGCAAAAAGACATGAGTAATGAATCACTCCAGTTGCCTTCAAAGGAGCAGAAGATAGCTGATGTGAATGTCTTCAAGCTTGTCGAACAGCAAAAGagagaaaaagaagaggcCTTAAACAAGATCCTTCAACTGGAAAAGCAGCTAGAGGCCAAACAAAAGTTAGAGATGGAAATGGAAGAGTTAAGAGGGCAATTGGAAGTTGGAGATGAAGATAATGCAGCTGTAAAGAAAAAGATGGAAGAATTGATTGCTCGTTACAGGAAGCTCATAAAGAATTAA 2517 0.3754 MDLSVMPKAFSNQHSWYESTFSQVTTTNNILKPTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPGYISSVLDLPLNLDTTHSPRFLGLNPKNGAWKASKFGKDVIVGVIDTGVWPESESFNDHGMTKIPSKWKGQLCQFENTNNSSFCNKKLIGARFFNKGFLAKFSNISTTIVNTTRDEHGHGTHTSTTAAGSRVDGASFFGYANGTASGIASSSRVAIYKTVWGPDADAVSSDVIAAIDAAVADGVDILSISLGYNNLPLYEDGFAIATFAAMEKGVFVSTSAGNNGPSFKSLHNGTPWVITVAAGTQNREFRGNLKLGNGVSVTGFASYLGNFYDSNIPIVFMGTCDNITELIKVNRKIVVCENNNGALSSRFFNVVEAKVVGAVFIANPSQNELSQLLWYPFPFIIVNQRYGKIVKDYIKSNNSSSVAKLSFKITSFGVKPAPSLDDYSSRGPSESCPYVLKPDITGPGTSILAAWPTNIPVLSYGSQKVFNKFNFLTGTSMACPHVAGVGALLKGVHRDWSPAAIRSAMMTTSDILDNTKKPIKDIGKGNKVATPLALGAGHINPNRALDPGLVYDVGVQDYVNLLCALNFTQKNITAITRSSFNDCSKPSLDLNYPSFIAFFKAGNFSSKTTQHFHRTVTNVGKSRTTYVASITPIKGFRLNVIPNKLVFKKKNQKISYRLSIEGPRMIQKNIESFGYLTWKDGKHVVRSPIVGIQLLIFTLSVLSVLSCDPFRSISSLQKDMSNESLQLPSKEQKIADVNVFKLVEQQKREKEEALNKILQLEKQLEAKQKLEMEMEELRGQLEVGDEDNAAVKKKMEELIARYRKLIKN 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00830 838 CDD PA_subtilisin_like 318 432 - -
Tsu08g00830 838 ProSitePatterns Serine proteases, subtilase family, serine active site. 504 514 IPR023828 -
Tsu08g00830 838 CDD Peptidases_S8_3 76 540 IPR034197 -
Tsu08g00830 838 ProSiteProfiles Serine proteases, subtilase domain profile. 75 575 - -
Tsu08g00830 838 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 720 IPR045051 -
Tsu08g00830 838 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 78 IPR037045 -
Tsu08g00830 838 Pfam Peptidase inhibitor I9 8 77 IPR010259 -
Tsu08g00830 838 Coils Coil 773 838 - -
Tsu08g00830 838 PANTHER PUTATIVE-RELATED 1 720 - -
Tsu08g00830 838 Gene3D - 312 443 - -
Tsu08g00830 838 Pfam Fibronectin type-III domain 619 720 IPR041469 -
Tsu08g00830 838 Gene3D Peptidase S8/S53 domain 104 588 IPR036852 GO:0004252|GO:0006508
Tsu08g00830 838 Gene3D - 592 722 - -
Tsu08g00830 838 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Tsu08g00830 838 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Tsu08g00830 838 PRINTS Subtilisin serine protease family (S8) signature 102 121 IPR015500 -
Tsu08g00830 838 Pfam Subtilase family 102 545 IPR000209 GO:0006508|GO:0008236
Tsu08g00830 838 SUPERFAMILY Subtilisin-like 78 579 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00830 Tsu-Chr8 8968811 8975243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00830 1 710 Subtilisin-like Serine Gene Family AT5G67090 44.000 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00830 - - gmx:100786751 888.641