Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00828 ATGAAACCCCATATTTCTCAACGCACGATGTTCTCTTACATTACACTCCTTCGCCTCATTTTCATTACATTGGCTCAATCTGATAACTATATCATACACATGAACTTATCAGCCATGCCTAAAGCATTCTCAAATCATCACACTTGGTATCAAAAAACTCTTTCCTCTGCATTAGAGAATCCTCAACTCACAACAACCAAAAATCTCAACTCTCCAATTTCTTCTAAGTTAATCTACACCTACACACATGCTATGAATGGTTTCAGTGCAAATTTGTCACCAAAAGAACATGAATCTATCAAAAACTCCTTTGGTTACATTTCTTCAATACCTGATTTACTTTTGAAGCTTGACACAACACACTCACCTAAATTCCTTGGCCTTAATCCATACAAAGGGGCATGGCCAGCTTCCGATTTTGGTAAAGATATCATTGTTGGTGTGATTGATACTGGTGTTTGGCCGGAAAGTGAGAGTTTCAAAGACCATGGAATGACTAAAATTCCTTCTAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTTTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAATAGAGGGTTATTTGCACAATTTCCAAACATTAGTACAACAATTGTGAACACGACACGCGACACACACGGCCATGGAACCCACACTTCAACAACGGTAGCTGGAAGCAGAGTAGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCAAGAGGAATAGCTTCATTGTCTAGAGTAGCCATTTACAAGACCGCGTGGGGAGAAGATGGAATTGCACAATCATCTGATTTAATAGCTGCAATTGATGCAGCAATTTCAGATGGTGTGGATGTTATTTCAATATCTGATGGTAAAGATAATCTACCATTGTTTGAAGATCCTATAGCTATAGCTACATTTGCAGCAATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCAGGAAATAGTGGACCAGACCTTAAAACATTACACAATGGAACACCTTGGGTTATAACTGTGGCTGCTGGTACTATGGATAGAGATTTTTATGGGACTCTTACACTTGGAAATGGTAAAAAGATCACAGGATTGTCTTTCTATATAGGACCATTCCCTACACATAATGTTCCTATTGTTTTCATGGGTTTATGCGACAATGTTAAGGAATTgaaaaaagtgaagaaaaagattgTGGTGTGTGAAGAAAAGAATGGAATTAGCATTTATGATCAAGTCTATTATTTGGATGTGGCAAAAGTTTTTGGTGCTGTTTTGATTTCAAATATCTCCAATACAGACAATTCACAGAATAGTTTTCCAACCATCATTGTTGATCCAATTCATGGTGAAATTATCAAAGCTTACATCAAGAGTTATTACAATTCTAAGCATGCTACTCCAGTTGCAAACATATCTTTCATGGAAACTGGTTTTGGTGTTAAACCAGCACCTAGCGTTGATTCTTATAGTTCAAGAGGCCCATCATATAGTTGTCCATTTGTGTTGAAACCGGATATTACTGCACCTGGTACTGCGATCTTAGCAGCATGGCCTACAAATGTTCCTGTGTTGGAATTGAAGTCTCAAAAGTTTTTCAGCGAATTTAATATTAGAAGCGGAACATCTATGGCGTGTCCTCATGTTGCAGGTGTAGCGGCGCTTATAAAAGGTGCACACCGTGATTGGAGCCCTGCTGCTATTCGGTCAGCAATAATGACAACATCTGACATATTTGATAATACAAAGGAACAAATCAAAGACATTGGAAACGGTGAGAAAGCAACACCTTTTGCATTAGGAGCTGGTCATGTTAATCCTAATAAAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAAATATTCACAAAGAAACATCACTACCATTACAAGATCCTCTTCCAATGATTGCACTAAACCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTTTTCAAAGGTGGAAACTCTTCTTCAAGTACAGTACAAGAATTTCATAGAACAGTGACCAATGTTGGTGAGGGACAAACAATTTATGTTGCTAGCATTACTCCAATTAAAGGGTTGCATGTCAGTGTTATTCCAAACAAGTTGGTGTTCTATGAGAAGAATGAGAAGCTAAGCTACAAGTTAAGGATTGAAGTTGCAAGTATGACAAAATTAAAGAAAGTGGCTTTTGGATATCTAATTTGGATGGATGTGAAGCATGTTGTTAGGAGTCCAATTGTGGTTACGACTCTCAAATAA 2298 0.3712 MKPHISQRTMFSYITLLRLIFITLAQSDNYIIHMNLSAMPKAFSNHHTWYQKTLSSALENPQLTTTKNLNSPISSKLIYTYTHAMNGFSANLSPKEHESIKNSFGYISSIPDLLLKLDTTHSPKFLGLNPYKGAWPASDFGKDIIVGVIDTGVWPESESFKDHGMTKIPSKWKGQLCQFENTNNSSFCNKKLIGARFFNRGLFAQFPNISTTIVNTTRDTHGHGTHTSTTVAGSRVDGASFFGYANGTARGIASLSRVAIYKTAWGEDGIAQSSDLIAAIDAAISDGVDVISISDGKDNLPLFEDPIAIATFAAMEKGVFVSTSAGNSGPDLKTLHNGTPWVITVAAGTMDRDFYGTLTLGNGKKITGLSFYIGPFPTHNVPIVFMGLCDNVKELKKVKKKIVVCEEKNGISIYDQVYYLDVAKVFGAVLISNISNTDNSQNSFPTIIVDPIHGEIIKAYIKSYYNSKHATPVANISFMETGFGVKPAPSVDSYSSRGPSYSCPFVLKPDITAPGTAILAAWPTNVPVLELKSQKFFSEFNIRSGTSMACPHVAGVAALIKGAHRDWSPAAIRSAIMTTSDIFDNTKEQIKDIGNGEKATPFALGAGHVNPNKALDPGLVYDVGVQDYVNLLCALKYSQRNITTITRSSSNDCTKPSLDLNYPSFIAFFKGGNSSSSTVQEFHRTVTNVGEGQTIYVASITPIKGLHVSVIPNKLVFYEKNEKLSYKLRIEVASMTKLKKVAFGYLIWMDVKHVVRSPIVVTTLK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00828 765 Gene3D - 351 483 - -
Tsu08g00828 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Tsu08g00828 765 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Tsu08g00828 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Tsu08g00828 765 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Tsu08g00828 765 ProSiteProfiles Serine proteases, subtilase domain profile. 125 615 - -
Tsu08g00828 765 SUPERFAMILY Subtilisin-like 117 619 IPR036852 GO:0004252|GO:0006508
Tsu08g00828 765 CDD PA_subtilisin_like 357 476 - -
Tsu08g00828 765 CDD Peptidases_S8_3 115 581 IPR034197 -
Tsu08g00828 765 Pfam Peptidase inhibitor I9 30 116 IPR010259 -
Tsu08g00828 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Tsu08g00828 765 Pfam Subtilase family 141 606 IPR000209 GO:0006508|GO:0008236
Tsu08g00828 765 PANTHER PUTATIVE-RELATED 19 763 - -
Tsu08g00828 765 Gene3D Peptidase S8/S53 domain 143 628 IPR036852 GO:0004252|GO:0006508
Tsu08g00828 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 763 IPR045051 -
Tsu08g00828 765 Gene3D - 632 764 - -
Tsu08g00828 765 Pfam Fibronectin type-III domain 659 761 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00828 Tsu-Chr8 8914632 8916983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00828 19 764 Subtilisin-like Serine Gene Family AT5G67090 45.822 0.0 608