Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00822 ATGAATTCCATAGTTCTCTCTACCACTACAATCAATACACCAAATCACAATCTTTGTGATGACTCAAGTTATCATACAATCGATCTAACACCATGGGATCTCCAATTCCTTCCATATGGAGTAAACCAAAAGGGTCTTATCTATCGCCATCCCGTGAAACAAGACACGTCAAATCAGATCAAACACCTTAAACACTCTCTTTCATCCACTCTTAAAATGTTTCCATCCTTCATGGGTCGTCTCAAAATTAAGGAACACGAAGATAATACTATCTCATGTTCCATCACCTGCAACAATGAAGGTGCACTTTTTGTCCACGCTGCAGCTGAAAACACTAGTGTCGATGACATTCTTGTAACCACTTATAATCCTCAAATCCTCAAGTCATTTTTTCCACTTAACGGTGTTAAAAACTACCAAGGCACATCAAATCCGTTATTCGCAGTCCAAGTAACAGAGCTAGTTAACGGCATTTTCATTGGCTGCACAATTAATCATGTGGTTGCTGATGGTACTTCGATTTGGCATTTCATCAATTCATGGGCTGAAATGTCAAGGGGATGTCTTGAAATATCAAAAATTCCATCATTCGAACGATGGTTTCCAAATGATATTCAACGTCCGATTAGATTTCCATTCACAATAGAACCACAAAATAATCACTATAATAATGATAATCAAAAAGACAACCACAAACCACCGGTGAGGTTATTTCATTTCACAAAAGAGAATATTGCAAAACTAAAATTCAAAGCCAACTTAGAGGCTGGTGCAAAGAACATATCTTCTTTGCAAGCACTTTACACTCACATTTGGAGATCTATTATACGTTCCAAAAATCTTGACCCAGAAGAAGAAGTAAATTGTGTGTTGGCTATAGGCATTAGACCAAGGTTGATTCCACCGCTGAAAGAGGGATATTTTGGGAATGCTGTGATAGATTATAAGGTTACCATGAAAGTTTGCGAGTTGTTGGAAAACAACGGGCTTGGTAAATGTGCTTCGAAAATGAACAAGATGATAGCTTTGCAGTCTGATGAGAAGTTAAAAAATCACTATGAGAATTGGTTGAAAATACCAGGTTTTTTTAATGTTGGTAAGTACGATAATGAAACATTAATGTTTGGTAGTTCCCCTCGATTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGGAGTTCGACATGGGGgtctaaataaaaaaagtggatTTATTAGTGTGGTTGCAGGTGGAGAAGAAGGTAGTATGGactttgaattgtgtttttcttaTGAAACTTTGGAGGCAATTTGTAATGATCCTGAGTTTATGGAGGTTGTGTCCAACTAA 1338 0.3647 MNSIVLSTTTINTPNHNLCDDSSYHTIDLTPWDLQFLPYGVNQKGLIYRHPVKQDTSNQIKHLKHSLSSTLKMFPSFMGRLKIKEHEDNTISCSITCNNEGALFVHAAAENTSVDDILVTTYNPQILKSFFPLNGVKNYQGTSNPLFAVQVTELVNGIFIGCTINHVVADGTSIWHFINSWAEMSRGCLEISKIPSFERWFPNDIQRPIRFPFTIEPQNNHYNNDNQKDNHKPPVRLFHFTKENIAKLKFKANLEAGAKNISSLQALYTHIWRSIIRSKNLDPEEEVNCVLAIGIRPRLIPPLKEGYFGNAVIDYKVTMKVCELLENNGLGKCASKMNKMIALQSDEKLKNHYENWLKIPGFFNVGKYDNETLMFGSSPRFDVYGNDFGWGKPVGVRHGGLNKKSGFISVVAGGEEGSMDFELCFSYETLEAICNDPEFMEVVSN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00822 445 Gene3D - 4 209 IPR023213 -
Tsu08g00822 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 443 - -
Tsu08g00822 445 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 9 443 - -
Tsu08g00822 445 Gene3D - 214 434 IPR023213 -
Tsu08g00822 445 Pfam Transferase family 22 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00822 Tsu-Chr8 8880129 8881711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00822 63 431 Monolignol Biosynthesis Gene Families AT5G48930 26.842 6.67e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00822 - - gmx:100500257 483.411