Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00819 ATGGGAGATCAACCAATAACCAGGGCAGACCTTAAGGGTATTGTGGCTTTTACCACGTCCCTAACTGCTTTGAATGTACAAATAGCGGCGTTAGCAATTCAGTTGAACAACAAtgccaacaacaacaacaaccacaacagaAACAATTCGATTAGGGGTGAAGGACAAATTCCGGTTATTAGGGATGGTTACAACAAGTTTAAAATCTCGAATTCAATATATTGTTGTCCGTTTTGTTACAACAAAGATTACTCCTTGACCAACCTTTTGAGACATGCTTCCAGAATGGCAGGTAACTCGCGTAACACGATTAAAGATATTGCTAAACATTCTATTTTGATAACGTATATTGAAAGGTATCTTAATGTTAAAgatatcatcatcaataatgacaCAACCGAAATAAACAATGCATCTGTAGTTGGAAAGAACCAAATTATTGAGGATTTGAATTCTTCAGAAGTAATGGAGACTGATGAGTCTATCCCTTTAGGATTTTCCAACGCTACTTTCAATAATAAACAAGAATTCCACGACGTATTGCCGCCACTAGATGCGAAAGAAAAGTTGAATCTGGAAACAGAGGTCCAAACGGAGGTAAAAGAATGTACCGAAAAAGATTTGTTTGTTGATAATGGTCATGAAACAAACGATATTTTTACGACCAAAATAACAATCAGGAATACTCTTCTGCTTGAAGACGAGAGTGAGAACCATGAAGTGCAGAAAACCGATGACAACAAAGGTATCTTATCGTGCCAATGCGCACTGCAAGGTCAAGGACCGCCGCTAAAGTTTCCGGCGGCTCATGGCCGACGCAAATGTCAAAATCTAGGGCCATTCTTGTATCAGTTGCGACGGAAAATGGCCGCCGCAAATAACCGCCGCAAAGGTGAGAAAGCAACACCTTTTGCATTAGGAGCTGGTCATGTTAATCCTAATAAAGCACTTGACCCTGGTCTTGTTTATGATGTTGTTGTACAAGATTATATTAATCTTCTTTGTGCACTTAAATACTCACAAAGAAACATCACTACCATTACAAGATCCTCTTCCAATGATTGCACTAAACCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGGAAACTCTTCTTCAAGTACAGGACAAGAATTTCATAGAACAGTGACCAATGTTGGTGAGGGACAATCAATTTATGTTGCTAGCATTACTCCATTTAAAGGGTTCCATGTCAGTGTTATTCCAAACAAGTTGGTGTTCGATGAGAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGTTGCAAGTATGACAAAATTAAAGAAAGTGGCTTTTGGATATCTAATTTGGATGGATGTGAAACATGTTGTTAGGAGTCCAATTGTGGTCACCACTCTCAAATAA 1404 0.3718 MGDQPITRADLKGIVAFTTSLTALNVQIAALAIQLNNNANNNNNHNRNNSIRGEGQIPVIRDGYNKFKISNSIYCCPFCYNKDYSLTNLLRHASRMAGNSRNTIKDIAKHSILITYIERYLNVKDIIINNDTTEINNASVVGKNQIIEDLNSSEVMETDESIPLGFSNATFNNKQEFHDVLPPLDAKEKLNLETEVQTEVKECTEKDLFVDNGHETNDIFTTKITIRNTLLLEDESENHEVQKTDDNKGILSCQCALQGQGPPLKFPAAHGRRKCQNLGPFLYQLRRKMAAANNRRKGEKATPFALGAGHVNPNKALDPGLVYDVVVQDYINLLCALKYSQRNITTITRSSSNDCTKPSLDLNYPSFIAFFNGGNSSSSTGQEFHRTVTNVGEGQSIYVASITPFKGFHVSVIPNKLVFDEKNEKLSYKLRIEVASMTKLKKVAFGYLIWMDVKHVVRSPIVVTTLK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00819 467 Pfam XS zinc finger domain 76 110 IPR005381 GO:0031047
Tsu08g00819 467 Gene3D Peptidase S8/S53 domain 291 330 IPR036852 GO:0004252|GO:0006508
Tsu08g00819 467 Gene3D - 334 466 - -
Tsu08g00819 467 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 300 465 IPR045051 -
Tsu08g00819 467 Pfam Fibronectin type-III domain 361 463 IPR041469 -
Tsu08g00819 467 PANTHER PUTATIVE-RELATED 300 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00819 Tsu-Chr8 8826964 8833791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00819 303 452 Subtilisin-like Serine Gene Family AT5G67090 48.684 2.08e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00819 - - gmx:100786751 253.447