Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00817 ATGTTGTTCTCCTATATTGCAATATTCCTTCACTTCATTTTCATAACATTAGCTCAATCTGATAACTATATCATACACATGAACATATCAGCCATGCCAAAAGAATTCTCAACTCATCACACTTGGTATCAATCAACTCTTTCCTCGTCATTAGAGAAACTTCAACTcacaacaacaaccaataatCTCAACTCTCCAATTTCATCTAAGTTAATTTACACCTACACACATGCCATGAATGGTTTCAGTGCTAATTTGTCACCAAAAGAACATGAATCTCTCAAAAACTCCCCCGGTTACATTTCTTCAATACTTGATTTACCCTTAAAGGTAGACACAACACACTCACCTCAATTCCTTAGTCTCAATCCTAACATAGGAGCTTGGCATGATTCAGATTTCGGTAAAGATGTCATCGTTGGTTTGATTGACACGGGTGTTTGGCCAGAAAGTAAAAGCTTCAATGATTATGGAATGACTAAAATTCCTTCAAAATGGAAAGGACAGTGTGAAAATAGCATTCATTTCAACTCATCACTTTGCAACAAGAAACTCATTGGTGCTAAATTCTTCAACAAAGGATTATTAGCAAAATATCCAAACGTCACCTTAGGTTTAAACTCCACACGTGACACAGAAGGTCATGGGACCCACACTTCATCAACATCAGCTGGAAGTAGAGTTGATGAAGCTTCATTCTTTGGTTATGCAGCTGGAACAGCTTCAGGTATAGCTTCAAATTCACGTGTAGCAATGTATAAAGCTTTATGGGAAGGTGGATTGCTATCGTCTGATATAATAGCTGCAATTGACGCTGCAATATCAGACGGTGTTGATGTTCTTTCATTATCATTTGGTCTAGATGAAGTACCTTTGTATGAAGATCCTGTTGCTATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTACTACTTCAGCTGGAAATGAGGGACCAACCCTTAAAACATTACACAATGGAACACCTTGGGTCATAACTGTGGCTGCTGGAACTATGGATAGAGGTTTTCAAGGGATGCTTACACTTGGAAATGGCAACAAAATCATAGGAATTTCTCTTTATATAGGAACATTCTCTACACATAATGTTCCTATTGTTTTCATGGGTTTATGTGACAATGTTAAGGAATTGGAAAAAGTGAAGAGAAAGATTGTTGTCTgtgaagagaagaatgaaactaGCATTTTTGATCAAGTCGATTATTTGGATGCAGCAAATGTTTTTGGAGCtgttttaatttcaaattcttcAGAAACATACTATACACAGAATAGTTTTGCAACCATCATTGTTGATCCAATAAATGGCGAAATTGTAAAAGCTTATATCAAGAGTTATTACAATTCTAAGCACTCTACTTCAATAGCAAGCATGTCTTTCATGAAAACAAGCTTTGGTGTAAAACCGGCACCTAGCGTTGATTCTTATAGTTCAAGAGGTCCATCATTTAGTTGTCCATTTGTGTTGAAACCTGACATTACTGCACCTGGTACTTCAATCTTAGCGGCATGGCCTACAAATGTCCAAGTGTTGGAATTGAAGTCTCATAAATTTTTCAGCGAATTCAATATTATAAGTGGAACATCCATGGCATGTCCTCATGTTGCAGGTGTAGCAGCGCTTATAAAAGGTGTGCACCGTGATTGGAGCCCTGCGGTTATACGGTCGGCAATAATGACAACATCAGACATATTAGATAACACTAAGGAACCTATCAAAGACATTGGAAAAGGTAACAAAGCAGCGACACCTTTTGCGATGGGAGCTGGTCATGTTAATCCTAATAAAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAAATACTCACAAAGAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTCAACTACCCTTCATTTATTGCTTTTTTCAAGGGTGGAAACTCTTCTTCAAGTACTGTACAAGAATTTCATAGAACAGTGACCAATGTTGGTGAGGGACAAACAATTTATGTTGCTAGAATTACTCCAATTAAAGGGTTGCATGTCAGTGTTATTCCAAACACGTTGGTGTTCAATGAGAAGAATGAGAAGTTAAGTTATAAGTTAAGGATTGAAGTTGCAGGAATGACAAAGTTAAAGAAAGTGGCTTTTGGATATCTAACTTGGATGGATGTGAAGCATGTTGTTAGGAGTCCAATTGTGGTCACAACCCTCAAATTGAAATCCTAg 2280 0.364 MLFSYIAIFLHFIFITLAQSDNYIIHMNISAMPKEFSTHHTWYQSTLSSSLEKLQLTTTTNNLNSPISSKLIYTYTHAMNGFSANLSPKEHESLKNSPGYISSILDLPLKVDTTHSPQFLSLNPNIGAWHDSDFGKDVIVGLIDTGVWPESKSFNDYGMTKIPSKWKGQCENSIHFNSSLCNKKLIGAKFFNKGLLAKYPNVTLGLNSTRDTEGHGTHTSSTSAGSRVDEASFFGYAAGTASGIASNSRVAMYKALWEGGLLSSDIIAAIDAAISDGVDVLSLSFGLDEVPLYEDPVAIATFAAMEKGVFVTTSAGNEGPTLKTLHNGTPWVITVAAGTMDRGFQGMLTLGNGNKIIGISLYIGTFSTHNVPIVFMGLCDNVKELEKVKRKIVVCEEKNETSIFDQVDYLDAANVFGAVLISNSSETYYTQNSFATIIVDPINGEIVKAYIKSYYNSKHSTSIASMSFMKTSFGVKPAPSVDSYSSRGPSFSCPFVLKPDITAPGTSILAAWPTNVQVLELKSHKFFSEFNIISGTSMACPHVAGVAALIKGVHRDWSPAVIRSAIMTTSDILDNTKEPIKDIGKGNKAATPFAMGAGHVNPNKALDPGLVYDVGVQDYVNLLCALKYSQRNITTITRSSSNDCSKPSLDLNYPSFIAFFKGGNSSSSTVQEFHRTVTNVGEGQTIYVARITPIKGLHVSVIPNTLVFNEKNEKLSYKLRIEVAGMTKLKKVAFGYLTWMDVKHVVRSPIVVTTLKLKS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00817 759 PANTHER PUTATIVE-RELATED 14 756 - -
Tsu08g00817 759 CDD PA_subtilisin_like 348 463 - -
Tsu08g00817 759 Gene3D - 341 474 - -
Tsu08g00817 759 CDD Peptidases_S8_3 109 571 IPR034197 -
Tsu08g00817 759 Pfam Subtilase family 135 584 IPR000209 GO:0006508|GO:0008236
Tsu08g00817 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Tsu08g00817 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 756 IPR045051 -
Tsu08g00817 759 ProSiteProfiles Serine proteases, subtilase domain profile. 114 606 - -
Tsu08g00817 759 Pfam Peptidase inhibitor I9 23 110 IPR010259 -
Tsu08g00817 759 Pfam Fibronectin type-III domain 650 752 IPR041469 -
Tsu08g00817 759 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tsu08g00817 759 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tsu08g00817 759 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Tsu08g00817 759 SUPERFAMILY Subtilisin-like 112 610 IPR036852 GO:0004252|GO:0006508
Tsu08g00817 759 Gene3D - 623 755 - -
Tsu08g00817 759 Gene3D Peptidase S8/S53 domain 137 619 IPR036852 GO:0004252|GO:0006508
Tsu08g00817 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00817 Tsu-Chr8 8807549 8810058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00817 1 759 Subtilisin-like Serine Gene Family AT5G67090 46.046 0.0 619