Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00804 ATGGCAAGTTTCCTTTGTGATTCTGTGAAGCCATATGTGGTGAAATCGATTGATGGGGCAATAGCAGAAGCACGTCATGTATTATGCTTCACATGCATTGTTAaggaatttgaagaagaaagagcTAGGTTGGAACCAGAAAGGAGAACTATCGAGCAACGTGTCAAAGTGGCAAAACAAAGAGATAAAGATATTCAAGCTAATGTTGTTTCTTGGGAAGAGGAAATTGTTAAGCTCAATCAAATggacacaaaaacaaaacaaacatgtttttttggattttgtcctgATTGTATATGGCAATATAAAAAGGGAAAGGAGTTGGCAAATAAAGTGAAGAGGATCAAAGAACTAAAGGGAGAGAAATTTGAAAACATTGAACTTCCTCGCCATGTTCCAGGTATTGAACGCTATTCATCAAAAGATTACATTTCTTTTAAAAGCAGAGAGGCAAAATACAAAGAACTTTTGGATGCACTAAAAGATGACAACAACTACATAATCGGATTGCAAGGGATGGGTGGCACCGGAAAGACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAAGCTGGACAATTTGTTCATGTCGTAGACACGACCGTGTCGTTTACTcctgatataaaaaaaattcaagatgaTATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACACAAAAAACTATGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCCACATCTTGATTTTGAGGCAATAGGGATTCCAAAACAAGACAATTACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAGTAAAAGAACTTTCGACATAATGTGTTGTCATAAGACAATTGAATTGGATCTTATATCTGAAGAAGAAGCGTGGACCATGTTTGAAATGTATGCCGGGATATCTAATAGCGAGTCAAAAAAGTTGATCAATAAGGGACGTAAAATTGCAAAGGAATGCAAACAATTACCTGTTGCAATTTCAGCTATCGCCAGCAGCTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAGCAGCCTGTATCCATGCATGGTGTTGATGACGATGTGGTTGGAGTTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGAGGAAAATGTCATGCGGTTGTTCCTCTTATGTTCGGTTTTccgagaagatgaagaatactCTGTTGAAGATCTAACCAGACTTTGCATAGGAGTGGGTCTTTTTAGGGATGATGATTACACGTATAATGATGCTCGAAACAAAGTAGTTGTAGCCAAAAACAAGCTCGTAGATTCTTGTTTGTTGTTAAAGGTCGATGCGAAGCGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATTGCGGACAAAGAGATTCAATGTGTAAAATTGTTTGATACAAAGCAAAAGTCATTGGTAGAAAATCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGcatagatttttttaacttgGAATTTGATGGTTCCAAACTTGAGACTTTAATAGTCAGGGCGGATAGAGATGAAGACTGCAAATGTATAGAAGTTCCGAATTCTTTCTTTGAAAATGTTATCAAGCTTCgtgttttgtatttttcagGCTATTACCAACAACCAGCTTTATCATTACCAGATTCAATTCAGTCATTGACCAATATTCGATCTATATTGTTTGATAATGTTGATTTAGGTGATATCTCTATTTTGGGAAACCTACAAAGTCTTGAGACTCTTGATTTGTTTAGATGCAAAATCAACAAATTGCCAGACCAAATTACAAATCTGAGGAAGTTTAAATTGTTGAATTTGAGATATTGCAAAATCATAATGAATAATCCATTTGAAGTTATGAAAAGATGTGCATCACTTGAAGAATTGTATTTCAGAGATAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTGAGTTGCAAAGATATCAGATCAATAATGGATATTTGGATGGAAGTTCCAGATTTCCCAAATATGTTGTGTTTCGTGGTGATAAAGAGTGTAAATTTTCAGAAGAAACACTCAAGTACTGCATGCAAACAGCAAATGCTCTTCGTCTAAAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTATGATTGTTTCTGTAGAACATGGTATGAATGATCTTGTTGAACTTCATTTGGGTAAGATTTCACAACTACAGTTCCTCATTGACACCAATGGTTCTCATGTACCAAATGTCTTGTCCAACTTGGTTGTACTAGAACTGGAAGGAATGGAAAATTTGAAAGAACTATTCAATGAACCCCTTTCCTTTGAATCTTTGAACAATTTAGAAAAGCTATCAATCAAGGATTGTAAACAATTGCAAAGCTTGTTTAAAGCTGACTGCGAAGGACTGGAAACCATAATAGCAGATGAAAGAATAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAGTTATGGTTCAGTGTTTTCGAAACTGAAAGTTATCGATATTAAGGAATGTCGCCGATTAGAATCTATACTACCTTTCCTCTCTGCTCAAGACCTTCCAGCACTGGAAACTATCAGAATAAGAAAATGTGATGGATTGAAATATGTGTTTGGCCAATCTCAAAATGTTAAACTGGTTTCACTAAGTGAATTGGCCCTCTCTCCATTACCAAAATTCATTAGTATTTTTGAAGAATGTTATGATCCCATGTCTTCATGTGTGAAGGGATCATCTTCCACTTCCAATTATGGTTCCAAAGCACAAATACAATTGGATCCTCTCAAATGCAACATCTTCTCTTGCTGTCAAACTAGAATCCCATtggttgatgatgttgatgggGATCAACCACATGACAACTCAGTGGCACCAGAATCAAATTCATACCGTCTTAACATACGGGAACGTCTTGGAATACAATCAAAGATCCTCTGCAATATTAAAGAGATTGTGCTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGAAAATTATGAACTGTGATGAGCTGAAACACGTAATAATAGACACTGGAGATCATAACACTGGTGGCAATAACTGGGTCAATGTCTTCCCAAAATTGAAAGCGCTCTATGTTAAAGATTGCGCACAATTGAAATACATATTTGGACCTGAGACTAATGATCATCAAAACCACATGGAGGTTCAACTTCATTTTCCGGAATTGACAGATCTCCATCTTCTTGGTCTACCAACTATCTCTTCTTCTACTTTTGTGTTACTTACTTGCAATTTCAACCTTTCAATTTCCGCCGAAGAAGCATTGCCAATTAAGTGA 3399 0.3483 MASFLCDSVKPYVVKSIDGAIAEARHVLCFTCIVKEFEEERARLEPERRTIEQRVKVAKQRDKDIQANVVSWEEEIVKLNQMDTKTKQTCFFGFCPDCIWQYKKGKELANKVKRIKELKGEKFENIELPRHVPGIERYSSKDYISFKSREAKYKELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQAGQFVHVVDTTVSFTPDIKKIQDDIAGSLGLKWEDCNESDRHKKLWSRLTNGDKILVILDDVWDRGPHLDFEAIGIPKQDNYKGCRVLVTSRSKRTFDIMCCHKTIELDLISEEEAWTMFEMYAGISNSESKKLINKGRKIAKECKQLPVAISAIASSLKGQQNREHEWDVTLKSLKQPVSMHGVDDDVVGVYNCLKISYDNLKEENVMRLFLLCSVFREDEEYSVEDLTRLCIGVGLFRDDDYTYNDARNKVVVAKNKLVDSCLLLKVDAKRLKMHDLVRDAAQWIADKEIQCVKLFDTKQKSLVENQTNIKYLLCEGKCIDFFNLEFDGSKLETLIVRADRDEDCKCIEVPNSFFENVIKLRVLYFSGYYQQPALSLPDSIQSLTNIRSILFDNVDLGDISILGNLQSLETLDLFRCKINKLPDQITNLRKFKLLNLRYCKIIMNNPFEVMKRCASLEELYFRDSFNDFCQEITLPELQRYQINNGYLDGSSRFPKYVVFRGDKECKFSEETLKYCMQTANALRLKGIKGEWRNLMPMIVSVEHGMNDLVELHLGKISQLQFLIDTNGSHVPNVLSNLVVLELEGMENLKELFNEPLSFESLNNLEKLSIKDCKQLQSLFKADCEGLETIIADERIEDEEIDDGGNNKSYGSVFSKLKVIDIKECRRLESILPFLSAQDLPALETIRIRKCDGLKYVFGQSQNVKLVSLSELALSPLPKFISIFEECYDPMSSCVKGSSSTSNYGSKAQIQLDPLKCNIFSCCQTRIPLVDDVDGDQPHDNSVAPESNSYRLNIRERLGIQSKILCNIKEIVLTHFPKMKSVFILSIDLIMQLETLKIMNCDELKHVIIDTGDHNTGGNNWVNVFPKLKALYVKDCAQLKYIFGPETNDHQNHMEVQLHFPELTDLHLLGLPTISSSTFVLLTCNFNLSISAEEALPIK 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00804 1132 Gene3D - 138 299 IPR027417 -
Tsu08g00804 1132 SUPERFAMILY L domain-like 466 912 - -
Tsu08g00804 1132 PANTHER - 74 919 - -
Tsu08g00804 1132 Pfam NB-ARC domain 153 393 IPR002182 GO:0043531
Tsu08g00804 1132 Gene3D Ribonuclease Inhibitor 464 694 IPR032675 -
Tsu08g00804 1132 Gene3D - 302 395 IPR042197 -
Tsu08g00804 1132 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 74 919 - -
Tsu08g00804 1132 CDD SIMIBI 167 251 - -
Tsu08g00804 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Tsu08g00804 1132 PRINTS Disease resistance protein signature 167 182 - -
Tsu08g00804 1132 PRINTS Disease resistance protein signature 240 254 - -
Tsu08g00804 1132 PRINTS Disease resistance protein signature 597 613 - -
Tsu08g00804 1132 PRINTS Disease resistance protein signature 336 350 - -
Tsu08g00804 1132 Coils Coil 34 54 - -
Tsu08g00804 1132 SUPERFAMILY RNI-like 845 1121 - -
Tsu08g00804 1132 Gene3D Ribonuclease Inhibitor 732 927 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00804 Tsu-Chr8 8623628 8634007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00804 168 671 WRKY Transcription Factor Family AT5G45050 24.057 3.85e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00804 - - mtr:MTR_3g062420 1202.19