Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00803 ATGGCAAGTTTCCTATATGATTTGGTGAAGCCATGTGTGGAGAAATTGATTGACGGGGCAATAGCAGAAGCACGTCATGTATTCTGCTTCACATGTATTGTTAaggaatttgaagaagaaagaactaGGTTGGAACCAGAAAGGATAACTATCAAGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAAGATATTCAAGCTAATGTTGTTTCTTGGCAAAAGGATATTGATGAGCTCAATCAAGTggacacaaaaacaaaacaaacatgtttttttggattttgtcctgATTGTATATGGCGATATAAAAAGGGAAAGGAATTAGCAAATAAAGTGAAGAGGATCAAAGAACTAAAGGGAGAGAAATTTGAAAACATTGAACTTCCTCGCCATGTTCCAGGTATTGAACGCTATTCATCAAAAGATTACATTTCTTTTAAAAGCAGAGAGGCAAAATACAAAGAACTTTTGGATTCACTAAAAGATGACAACAACTACATAATCGGATTGCAAGGGATGGGTGGCATCGGAAAGACTACATTGGCCAAAGAAGTTGGTAAAGAGCTAAATCAAGCTGGACAATTTGCTCATGTCGTGGATACGACTGTGTCGTCTACTCCTGATATAAAAAAGATCCAAGATGAGATTGCTGGACCATTAGGATTGGAATTGAAGGATTGTAATGAATCAGACCGACACAAAAAACTGTGGAGCAGATTAACAAATGATCCACCTTTTGATTTTGATGCAATAGGGATTCCAAAACAGGACAATCACAAAGGTTGTAAAGTTCTTGTAACCTCGCGTAGTAAAGAAACTTTTAACCAAATGGATTGTGATAAGATAATTGAATTGGGTCTTTTATCCGAAGAAGAAGCGTGGATCATGTTCGAAAGGTATGCCAGGATATCTAATAGTTCCTCAAAAGAATTGATCGATAAGGGACGTGAAATTGCACAGGAATGCAAACAATTACCTGTTGCAATTTCAGTTATCGCCAGTAGCTTAAAGGGCCACCAACATCAAGTGCATAAGTGGGATGTGACATTGGAATCCTTGAAGAAGCACGAATTCATGCATGGTGTTGATAAAAATAAGGCTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATTTGACGGGTGAAAACATCAAGCAGTTGTTCCTCTTATGTTCGGTTTTCCGAGAAGATAACGAATATACTGTTGACATTCTAACCAGACTTTGCATAGGAATGGGTCTTTTTGGGGTAGATAATTGCTATTATAATGATGCTCGAAATCAAGTAGTTGACGCCAAAGACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGACGGTGAAAAATGTCTCAGAATGCATGATTTGGTTCGTGAAGCAGCTCAGTGGATAGGAAAGGAAGAGATTCAATGTGTaaatctgtttgataaaaagcAAAAGTCATTGGTAGAAAATCAGAAGAATATCAAATATGTATTATGTGAAGGGAAGTGCATGGATTTTTTTAACTTGAAATTTGATGGTTCCAAACTTGAGATGTTAATTGTCGTGGTGGATGGAGATGAAGACCGGGAATatgaagcgTGTCAATTTTCAGAAGAAACACTCAAGCACTGCATGCAAACAGCAAATGCTCTTTGTCTAGAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATGGTTTCTGTAGAACTAGGTATGAATGATCTTGTTGAACTTCATTTAGTTGAGATTTCACAACTACAGTGCCTCATTGACACCAATGGTTCTCATGTACCAAATGTCTTGTCCAACTTGGTTGTACTAAAActgaaaaaaatggaaaagttGAAAGAATTATTCCATGGAACCCGTTCCTTTGAATCATTGAACAATTTAGAAAAGCTATCAATCAAGGATTGTAAACATTTGCAAAGCTTGTTTAAAGGGAAGCTCCTCTGCAATCTAAAATCTATCACAATTCAGAGTTGCCCTTTGTTAGTTTTCCTATTTGAAGTGTCAACTTCTCAAAGCTTAGTGCTActagagaaattgaaaatagCTGACTGCGAAGGACTGGAAACCATAATAGCAGATGAAAGAACAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAGTTATGGATCAATGTTTTCGAAACTGAAAGTTATCAATATTGAGAGATGTCACCGATTGAAATATGTGTTTGGCCAATCTCAAAATGTTGAACTGGTTTCACTAAGTGAATTGGCCCTCTCTGCATTACCAAAATTCATTAGTATTTTTGAAGAATGTTATGATCCCATGTCTTCACGTGTGAAGGGATCATCTTCCACTTCCAATTATGGTTCCAAAGCACAAATACAATTGGATCCTCTCAAATGCAACATCTTCTCTTGCTGTCAAACCAGAATCCCATtggttgatgatgttgatgggGATCAACCACATGACAACTCAGTGGCACCAGAATCAAATTCATACCGTCTTAACATATGGGAACGTCTTGGAATACAATCAAAGATCTTCTGCAATATTAAAGAGATTGTGCTGACTCATTTTCCAAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGAAAATTATGAACTGTGATGAGCTGAAACACGTAATAATAGACACTGGAGATCATAACACTGGTGGCAATAACTGGGTCAATGTCTTCCCAAAATTGGAAGAGCTCGATGTTGAAGATTGCGAGCAATTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACCACATGGAGGTTCAACTTCATTTTCCAGAATTGACGGATCTCCGTCTTGTCGGTCTACCTAGTTTGATCGCCACTTGTCCTAAACAATATCGAATAGCATTTCCTTCTTTGAAAAGTCTTGAACTCGGGAAATGTTCCCAGGATACTACAATCATTAAGCAACTGGACTTGGGTTTGCAAAAGATTAAGTTGATTGATCTGCCTATGATGACTTGTCTTTTTTTGGGTCCCAAAAATTCATTTGCCCTCAAAAAGCTTAGAGACATAAGAATTGTGGGatgtgaaaaattgaaaattgcatTCTCCACTTCCATTTTAAGATTCCTACCACAATTGCGTTATTTAAGAATTGAAGAATGCGAAGAGTTGGAACATATCATTGAAGATGATTTGGAGAATAAAGACAATTCAAATTCCTTATCTTCAACAACATGCTTCCCAAAGCTAGAACgactttctgttacaaagtgcAACAGGTTGAAATTTGTATTCTCCACTTCCATTTTAAGATTCCTACCACAATTGTGTTATATATCAATCGAAGAATGCGAAGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAAGACAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTAGAACAACTTGCTGTTATAAAGTGCAACAAGTTGAAATTTGTCTTTCCATTCTCTGTATGTAAAGAGCTTCCGAAGTTAAAAGTTCTGATGATAGCAGAAGCAAATGAGTTAGAGGAATTATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAATCTAAAAATTGTAGCATTTGATATGCTACGAAGCCTTTGTCGTGCTCAGGGAAATCAATTTCAGGCTGTGAAAAATCGCTTCGTGCGGAATTGTCAAAAACTCACTCTTACTTCAGCATCAACAACAAACACCTTTGAGGAAATTAAGGAAATTTATCGTGCAGTGAGCAACGGAGATTATGAATTGTATCGGAATGTGCGGGATCTATTTAAACAACTACCAAGTGAAGAAACCACTAGAGATTTTGAGAAACCAAGTGTTGAAAATGTTCAGGATTTAACAATACTGCCAACAAATTCAAAATTGGAGGGATCAACATCAGAAAAAACAGCAATTGCAACTATGTCTACAATTTCAGGAACAAAGAATGAGCCACCTATAGAAGTAGTTGCTCCTAAACAAAAGGGTATTGAGATAGAAGGAACTTCTAAGACTAATAATGATCAagTTTCTCTAAATGATGATGTTTTCATGAAAGTAAACTCAAATGTTGAGAAACAGTTTTCTAATGATGATGACATAATAGTTTCCAAATCTAAATCCTCTCCTAGAATCACATCTCCTATTGTGTCTCCGTTCCCTTCGATGCCTTCTAAAGGGGACCCTTCTCAAGAAATAGAAGATTTAGCAATACTACCAACAAATTCAGAAGAGTTGTTGAATGAACAATGGATGGATCAACAACATTCACTTGGAAAAACTGATACTATAGTCAAACCTTCCCAATTGGAGGGATCAACATCAGAAAAAACAACAGTTGCAATGTCTACCATTTCAGAAACAAAGAATGAGCCATCTATACAAGGTATTGAGATAGAAGGAACTCCTAAGACTAACAATGATCAAGTTTCTCAAACTGACAATGCTTTCATGAAAATAAACTCAAAAGTTGAGGAACAATTTTCTAAGGATGATGAAATAACAGTTTCCAAATTTAAACCCTCTCCTGGCATCACATCTCAGTTCCCTTCAATGCCTTCTAAAGGTGACCCTTCTCAGAAAGTAGAAGATATAAGTTCTTCTTTGCTTGTGACGAGGGAGCTTGAACAACTGGTCTCTAAGAATCATTTGGATTATGAGAACTTGTCTTTGTTAACTGATTTTCTTGTTAAGAATCCTTCTGTTCGTTTAAAGGACACTTCACTTCGTGACCGATACAAGGGTTGTGCTTACAACTTACTAGCTGAGCTATTGAAATTCCTTGAAACCCATAGTTTGTTGGAAGTATCGGGCTCATGCCACTCTGAATTTGTGGAGCTTTTACAAGATGCGCGCTACTTTGCTTTTGATAAGGAATGGTTGGATGGTGTCGAGAGGCGTGCTTTATCTCCTCAAAGACAAGTATCTCCAGATGCCTTGGAAAAGTTATTGGAATCCAAGAAACGGGTTACCAAGGATGTTGAAGATTTGCGTTTCAAGATAGACATTTTAAGTCAACATGTGGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAGGCAGTTTTAACTGCCCCTATTGGTTATTAg 5112 0.3554 MASFLYDLVKPCVEKLIDGAIAEARHVFCFTCIVKEFEEERTRLEPERITIKQRVKVAKERDKDIQANVVSWQKDIDELNQVDTKTKQTCFFGFCPDCIWRYKKGKELANKVKRIKELKGEKFENIELPRHVPGIERYSSKDYISFKSREAKYKELLDSLKDDNNYIIGLQGMGGIGKTTLAKEVGKELNQAGQFAHVVDTTVSSTPDIKKIQDEIAGPLGLELKDCNESDRHKKLWSRLTNDPPFDFDAIGIPKQDNHKGCKVLVTSRSKETFNQMDCDKIIELGLLSEEEAWIMFERYARISNSSSKELIDKGREIAQECKQLPVAISVIASSLKGHQHQVHKWDVTLESLKKHEFMHGVDKNKAGIYNCLKISYDNLTGENIKQLFLLCSVFREDNEYTVDILTRLCIGMGLFGVDNCYYNDARNQVVDAKDKLVDSCLLLEDGEKCLRMHDLVREAAQWIGKEEIQCVNLFDKKQKSLVENQKNIKYVLCEGKCMDFFNLKFDGSKLEMLIVVVDGDEDREYEACQFSEETLKHCMQTANALCLEGIKGEWRNLMPEMVSVELGMNDLVELHLVEISQLQCLIDTNGSHVPNVLSNLVVLKLKKMEKLKELFHGTRSFESLNNLEKLSIKDCKHLQSLFKGKLLCNLKSITIQSCPLLVFLFEVSTSQSLVLLEKLKIADCEGLETIIADERTEDEEIDDGGNNKSYGSMFSKLKVINIERCHRLKYVFGQSQNVELVSLSELALSALPKFISIFEECYDPMSSRVKGSSSTSNYGSKAQIQLDPLKCNIFSCCQTRIPLVDDVDGDQPHDNSVAPESNSYRLNIWERLGIQSKIFCNIKEIVLTHFPKMKSVFILSIDLIMQLETLKIMNCDELKHVIIDTGDHNTGGNNWVNVFPKLEELDVEDCEQLEYIFGHDTSDHQNHMEVQLHFPELTDLRLVGLPSLIATCPKQYRIAFPSLKSLELGKCSQDTTIIKQLDLGLQKIKLIDLPMMTCLFLGPKNSFALKKLRDIRIVGCEKLKIAFSTSILRFLPQLRYLRIEECEELEHIIEDDLENKDNSNSLSSTTCFPKLERLSVTKCNRLKFVFSTSILRFLPQLCYISIEECEELEHIIEDDLENKDNSNSLSSTTCFPKLEQLAVIKCNKLKFVFPFSVCKELPKLKVLMIAEANELEELFKSEDDQKVDIPNLKIVAFDMLRSLCRAQGNQFQAVKNRFVRNCQKLTLTSASTTNTFEEIKEIYRAVSNGDYELYRNVRDLFKQLPSEETTRDFEKPSVENVQDLTILPTNSKLEGSTSEKTAIATMSTISGTKNEPPIEVVAPKQKGIEIEGTSKTNNDQVSLNDDVFMKVNSNVEKQFSNDDDIIVSKSKSSPRITSPIVSPFPSMPSKGDPSQEIEDLAILPTNSEELLNEQWMDQQHSLGKTDTIVKPSQLEGSTSEKTTVAMSTISETKNEPSIQGIEIEGTPKTNNDQVSQTDNAFMKINSKVEEQFSKDDEITVSKFKPSPGITSQFPSMPSKGDPSQKVEDISSSLLVTRELEQLVSKNHLDYENLSLLTDFLVKNPSVRLKDTSLRDRYKGCAYNLLAELLKFLETHSLLEVSGSCHSEFVELLQDARYFAFDKEWLDGVERRALSPQRQVSPDALEKLLESKKRVTKDVEDLRFKIDILSQHVEDLKHQLTSSEAVLESIIQQEAVLTAPIGY 1703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00803 1703 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 74 526 - -
Tsu08g00803 1703 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 849 1077 - -
Tsu08g00803 1703 PANTHER - 74 526 - -
Tsu08g00803 1703 Gene3D Ribonuclease Inhibitor 827 1059 IPR032675 -
Tsu08g00803 1703 PANTHER - 531 760 - -
Tsu08g00803 1703 SUPERFAMILY L domain-like 564 761 - -
Tsu08g00803 1703 SUPERFAMILY RNI-like 938 1175 - -
Tsu08g00803 1703 MobiDBLite consensus disorder prediction 1506 1526 - -
Tsu08g00803 1703 Coils Coil 1645 1693 - -
Tsu08g00803 1703 PANTHER - 849 1077 - -
Tsu08g00803 1703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 392 IPR027417 -
Tsu08g00803 1703 PRINTS Disease resistance protein signature 322 336 - -
Tsu08g00803 1703 PRINTS Disease resistance protein signature 623 639 - -
Tsu08g00803 1703 PRINTS Disease resistance protein signature 167 182 - -
Tsu08g00803 1703 MobiDBLite consensus disorder prediction 1371 1395 - -
Tsu08g00803 1703 Pfam NB-ARC domain 153 379 IPR002182 GO:0043531
Tsu08g00803 1703 Gene3D - 138 284 IPR027417 -
Tsu08g00803 1703 Gene3D Ribonuclease Inhibitor 598 774 IPR032675 -
Tsu08g00803 1703 Gene3D Ribonuclease Inhibitor 1060 1242 IPR032675 -
Tsu08g00803 1703 Gene3D - 376 463 IPR036388 -
Tsu08g00803 1703 Gene3D - 287 375 IPR042197 -
Tsu08g00803 1703 MobiDBLite consensus disorder prediction 1371 1385 - -
Tsu08g00803 1703 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 531 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00803 Tsu-Chr8 8589270 8598001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00803 168 659 WRKY Transcription Factor Family AT5G45050 23.063 4.11e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00803 - - mtr:MTR_3g435040 820.846