Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00796 ATGTTGACAAATTTAAAGCGTAACCAAAGCATAGAAAACGAGATGGGAAATGTCCCCAGTGATTTGGTGAAGTCATATGTGGAGAAATTGATTGACAGAGCGATAGCAGAAGCACGTCATGTATTTTGCTTCACATGCATTGTTaaagaatttgaagaagaaagggCTAGGTTGGAACCAGAAAGGATAACAATCGAGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAAGATATTCAAGCTAATGTTGGTTCTTGGGAAGAGGAAATTGTTAAGCTCGATAAAGTggacacaaaaacaaaacaaacatgtttttttggattttgtcctgATTGTATATGGCGATATAAAAAGGGAAAGGAGTTGGCAAATAAAGTGAAGAGGATCAAAGAACTAAAGGGAGAGAAATTTGAAAACATTGAACTTACTCGCCGTCTTCCAGGTGTTGAACGCTCTTCATCCGAAAATTACATTTCTTTTAAAAGCAGAGAGGCAAAATATGAAGAACTTTTGGATACACTAAAAGATGACAACAACTACATAATTGGATTGCAAGGGATGGGTGGCACCGGAAAGACTACATTGGCCAAAGAAGTGGGTAAAGAGCTGAAGCAAGCTGGACAATTTGCTCATGTCGTAGATACGACCGTGTCGTTTACTcctgatataaaaaaaattcaagatgaTATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACACAAAAAACTATGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCCACATCTTGATTTTGACGCAATAGGGATTCCAAAACGAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAGTAAAAGAACTTTCAACATAATGGGTTGTCATAAGACAATTGAATTGGATCTTATATCTGAAGAAGAAGCGTGGACCATGTTTGAAACGTATGCCGGGATATCCAATAGTGATTCAAAAAAGTTGATCAATAAGGGACGTAAAATTGCAAAGGAATGCAAACAATTACCTGTTGCAATTTCAGCTATCGCCAGCAGCTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAAAAGCAACCTGGATTCATGCatggtgttgatgatgatatGGTTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGTCATGCGGTTGTTCCTCTTATGTTCGGTTTTccgagaagatgaagaatactCTGTTGAATATCTAACCAGACTTTGCATAGGAGTGGGTCTTTATAGGGATGATGATGACTTGTATAATGATGCTCGAAACAAAGTAGTTGTAGCCAAAAACAAGCTCGTAGATTCTTGTTTGTTGTTAAAGGTTGATGCGAAGCGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATTGCGAACAATGAGATTCAATGTGTAAAATTGTTTGATACAAAGCAAAAGTCATTGGtagaaaatcaaacaaatatgaaatatttattatgtGAAGGGAAGTGCATGGATATTTTTAACTTGAAATTTGATGGTTCCAAACTTGAGACTTTAATAGTCAAGGTGGATAGAGATGAAGACCGCAAATGTACAGAAGTTCCAAATTCTTTCTTTGAAAATGTTATCAAGCTtcgtgttttgtgtttttcagcaaaaagaaaaatacaaaatattctaTCTTTGTCATTACCtccttcaattcaattattgaCAAATATTCGATCTATGTCGGTTGATAATGTGGATTTAGGTGACATCTCTATTTTGGGAAAACTACAAAGTCTGGAGACTCTTGATTTGGTTGGATGCAAAATCAATGAATTGCCAAACCAAATTACAGAACTGGGGAAGTTTAAATTGTTGAAGTTGAAAGGTTGTGAAATTAGAATGAATAATCCATTTGAAGTTATTGAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAAGATAGTTTCAATGATTTTTGTCATGAAATAACCTTACCAAAGGTGCAAAGATATCATATCAATACAAGTGGAAGTCTCTTTTATTTGGAAATAAGTACCAGATTCCCCAAATATGTTGTGTTTTGTGGTGATAAAGCACGTCAATTTTCAGAAGAAACACTCAAGTACTGCATGCAAACAGCAAATGCTCTTTCTCTAGAAGGCATTAAGGGGGAATGGAGAAATCTCATACCTATGATTGTTTCTGTAGAACATGGTATGAATGATCTTGTTGAACTTCATTTGGATTGGATTTCACAACTACAGTTCCTCATTGACACCAATGGTTCTCATGTACCAAATGTCTTGTCCAACTTGGTTATACTAAAACTGAAAGGAATGGAAAATTTGGAAGAACTATTCAATGGACCACTTTCCTTTGAATCTTTGAACAATTTAGAAAAGCTATCAATCAAGAATTGTAAACATTTGCAAAGCTTGTTTAAAGGTAAGCTAAACCTATGCAATCTAAAATCTATCAAAATTCAGAGTTGCCCTTTGTTAGTTTTCCTATTTGAAGTGTCAACTTCTCAAAGCCTTGTGTTACTAGAGAACTTGAAAATAGCTGACTGTGAGAGACTGGAAACCATAATAGCAGATGAAAAAAGAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAGTTATGGTTCAGTGTTTTCGAAACTGAAAGCTATTGTTATTAATGAATGTCACCGGTTAGAATCTATACTACCTTTCCTCTCTGCTCAAGACCTTCCAGCACTGGAAACTATcagaataaaaaaatgtgatggATTGAAATATGTGTTTGGCCAATCTCAACATGTTGAACTGGTTTCACTAAGTGAATTGGAGCTCTCTGAATTACCAAACTTCATTGGTATTTTCGAAGAATGTAATCATCCCATGTCTTCATGCGTGAAGGGATCATCTTCAACTTCCAAAGCACAAATACAACTGGATCCTATCAAATGCAATATCTTCTCTTGCTATCAAACCAGAATCCCATtggttgatgatgttgatgggGATCAACCACATGAATACTCAGTGGCACCAGAATCAAATTCATACCGTCTTAACATATGGGAACGTCTTGGAATACAATCAAAGATCCTCTGCAATATTAAAGAGATTGTGCTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGAAAATTATGAACTGTGATGAGCTGAAACACGTAATAATAGACACTGGAGATCATAACACTGGTGGCAATAACTGTGTCAATGTCTTCCCAAAATTGAAAGAGCTCAATGTTGAAGATTGCGAGCAATTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACCACATGGAGGTTCAACTTCATTTTCCAGAATTGACGGATCTCCGTCTTTTCGGTCTACCTAGTTTGATCGCCACTTGTCCTAAACAATATCGAGCATTTCCTTCTTTGAAAAGTCTTGAACTCGGGAAATTTTCCCAGGATAATACAATCATTAAGGAATTGAGTGGGAACGTGGATCATTTTCTCACTTTGGAAATCCTTGAGTTATACAATAATTccaaattagaaaatatattttccccGAATGAAATTGATGGACAGCAACTGGACTTGGGTTTGCAAAAGATTGAGTTGATTGATCTGCCTATGATGACTTGTCTTTTTTTGGGTCCCAAAAATTCATTTGCCCTCAAAAACCTTACAGACATAACAATTGCGCGatgtgaaaaattgaaaattgtattCTCCACTTCCATTTTAAGATTCCTACCTGAGTTGCTTGATTTAAAAATTCAAGAATGCGAAGAGTTGGAACATATTGTTGAAGATGATTTGGAGAATAAAGACAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTAGTAACACTTATTGTTACAAAGTGCAACAGGTTGAAATTTGTATTCTCCACTTCCATTTTAAGATTCCTACCACAATTGTGTAATTTAAGAATCGAAGAATGCGAAGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAAGACAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTACAACGACTTTTTGTTACAAAGTGCAACAGGTTGAAATTTGTATTCTCCACTTCCATTTTACGATTCCTACCACAATTGTGTAATTTAAGAATCGAAGAATGCGAAGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAAGACAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTAGAAGTACTTGTTGTTATAAAGTGCAACAAGTTGAAATTTGTCTTTCCATTCTCTGTATGTAAAGAGCTTCCGAAGCTAAAAGTTCTGATGATAGCAGAAGCAAATGAGTTAGAGGAATTATTCAAAAGTGAATATGATCAGAAAGTTTATATTCCAAATCTAAAAATTGTAGCATTTGATATGCTACCAAGCCTTTGTTGTGCTCAGGGAAATCAATTTCAGGCTGTGAAAATTCGCTTCGTGCGGAATTGTCAAAAACTCACTCTTACTTCAGCATCAACAACCAACACCTTTGAGGAAATTTATGGTTTAATGAACATCGGAGGTTCTATATTGTATAGGAAAGTGCGGGGGCTATTTGAACAACTGCTAAGTGCAGAAACAACCGAAGAATTTGAGAAACCAAGTGTTGAAAATGTTCAGGATTTAACAATACTGCCAACAAATTCAAAAGAGTTGCTGAATCAACAATCAATGGACCAACAATACTCACTTGAAGAAACCGATACTATAATCAAACCTTCTCaaTTGGACGAATCAACGTCAGAAAAAACAGCAGTTGCAACTGTGTCTACCATTTCAGGAACAAAGAATGAGCCACCTATACAAGTCGGTATTGAAATAGAAGGAATTTCTAAGACTAATAATGATCAAGTTTCTCTAAATGATGACGCTTTCATGAAAGTAAACTCGACTGTTGAGGAACAATTTACCAAATCTATTGCATCTCAGTTCCCTTCAGTGCCTTCTAAAAGTGACCCTTCTCAAAAAGTAGAAGATTTAAGTTCTTCTTTGCTTGTCAAGAGGGAGCTTGAGGAACTGATCTCCAAGAATCATTTGGATCATGAGAACTTGTCTTTGTTAACTGATTTTCTTGTTGAGAATCCTTCGGTTCGTTTAAAGGACACTTCACTTCGTGATAGATACAAGGGTTGTGCTTACAACTTACTAGCTGAGCTATTGAAATTCCTCGAAACCCATAGTTTGCTGGAAGTATCGGGCTCATGCCACTCTGAATTTGTGGAGCTTTTACAAGATGCGCGCTACTTTGCTTTTGATAAGGAATGGTTGGATGGTGTCGAGAGGCGTGCTTTATCTCCTCAAAGACAAGTATCTCCAGATGCCTTGGAAAAGTTATTGGAATCCAAGAAACGGGTTACCAAGGATGTTGAAGATTTGCGTTTCAAGATAGACATTTTAAGTCAACATGTGGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGTTTTGGACAGTATCATTCAACAAGAGGCAGTTTTAACTGCCCCTATTGGTTATTAG 5658 0.3461 MLTNLKRNQSIENEMGNVPSDLVKSYVEKLIDRAIAEARHVFCFTCIVKEFEEERARLEPERITIEQRVKVAKERDKDIQANVGSWEEEIVKLDKVDTKTKQTCFFGFCPDCIWRYKKGKELANKVKRIKELKGEKFENIELTRRLPGVERSSSENYISFKSREAKYEELLDTLKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQAGQFAHVVDTTVSFTPDIKKIQDDIAGSLGLKWEDCNESDRHKKLWSRLTNGDKILVILDDVWDRGPHLDFDAIGIPKRDNHKGCRVLVTSRSKRTFNIMGCHKTIELDLISEEEAWTMFETYAGISNSDSKKLINKGRKIAKECKQLPVAISAIASSLKGQQNREHEWDVTLKSLKKQPGFMHGVDDDMVGIYNCLKISYDNLKDEKVMRLFLLCSVFREDEEYSVEYLTRLCIGVGLYRDDDDLYNDARNKVVVAKNKLVDSCLLLKVDAKRLKMHDLVRDAAQWIANNEIQCVKLFDTKQKSLVENQTNMKYLLCEGKCMDIFNLKFDGSKLETLIVKVDRDEDRKCTEVPNSFFENVIKLRVLCFSAKRKIQNILSLSLPPSIQLLTNIRSMSVDNVDLGDISILGKLQSLETLDLVGCKINELPNQITELGKFKLLKLKGCEIRMNNPFEVIERCSSLEELYFKDSFNDFCHEITLPKVQRYHINTSGSLFYLEISTRFPKYVVFCGDKARQFSEETLKYCMQTANALSLEGIKGEWRNLIPMIVSVEHGMNDLVELHLDWISQLQFLIDTNGSHVPNVLSNLVILKLKGMENLEELFNGPLSFESLNNLEKLSIKNCKHLQSLFKGKLNLCNLKSIKIQSCPLLVFLFEVSTSQSLVLLENLKIADCERLETIIADEKREDEEIDDGGNNKSYGSVFSKLKAIVINECHRLESILPFLSAQDLPALETIRIKKCDGLKYVFGQSQHVELVSLSELELSELPNFIGIFEECNHPMSSCVKGSSSTSKAQIQLDPIKCNIFSCYQTRIPLVDDVDGDQPHEYSVAPESNSYRLNIWERLGIQSKILCNIKEIVLTHFPKMKSVFILSIDLIMQLETLKIMNCDELKHVIIDTGDHNTGGNNCVNVFPKLKELNVEDCEQLEYIFGHDTSDHQNHMEVQLHFPELTDLRLFGLPSLIATCPKQYRAFPSLKSLELGKFSQDNTIIKELSGNVDHFLTLEILELYNNSKLENIFSPNEIDGQQLDLGLQKIELIDLPMMTCLFLGPKNSFALKNLTDITIARCEKLKIVFSTSILRFLPELLDLKIQECEELEHIVEDDLENKDNSNSLSSTTCFPKLVTLIVTKCNRLKFVFSTSILRFLPQLCNLRIEECEELEHIIEDDLENKDNSNSLSSTTCFPKLQRLFVTKCNRLKFVFSTSILRFLPQLCNLRIEECEELEHIIEDDLENKDNSNSLSSTTCFPKLEVLVVIKCNKLKFVFPFSVCKELPKLKVLMIAEANELEELFKSEYDQKVYIPNLKIVAFDMLPSLCCAQGNQFQAVKIRFVRNCQKLTLTSASTTNTFEEIYGLMNIGGSILYRKVRGLFEQLLSAETTEEFEKPSVENVQDLTILPTNSKELLNQQSMDQQYSLEETDTIIKPSQLDESTSEKTAVATVSTISGTKNEPPIQVGIEIEGISKTNNDQVSLNDDAFMKVNSTVEEQFTKSIASQFPSVPSKSDPSQKVEDLSSSLLVKRELEELISKNHLDHENLSLLTDFLVENPSVRLKDTSLRDRYKGCAYNLLAELLKFLETHSLLEVSGSCHSEFVELLQDARYFAFDKEWLDGVERRALSPQRQVSPDALEKLLESKKRVTKDVEDLRFKIDILSQHVEDLKHQLTSSEAVLDSIIQQEAVLTAPIGY 1885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00796 1885 SUPERFAMILY RNI-like 1052 1220 - -
Tsu08g00796 1885 Gene3D Ribonuclease Inhibitor 1313 1558 IPR032675 -
Tsu08g00796 1885 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 88 980 - -
Tsu08g00796 1885 Gene3D - 145 312 IPR027417 -
Tsu08g00796 1885 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1381 1506 - -
Tsu08g00796 1885 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1206 1325 - -
Tsu08g00796 1885 Gene3D - 316 410 IPR042197 -
Tsu08g00796 1885 PANTHER - 88 980 - -
Tsu08g00796 1885 PANTHER - 1206 1325 - -
Tsu08g00796 1885 PANTHER - 1381 1506 - -
Tsu08g00796 1885 SUPERFAMILY L domain-like 481 975 - -
Tsu08g00796 1885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 420 IPR027417 -
Tsu08g00796 1885 PRINTS Disease resistance protein signature 254 268 - -
Tsu08g00796 1885 PRINTS Disease resistance protein signature 815 831 - -
Tsu08g00796 1885 PRINTS Disease resistance protein signature 181 196 - -
Tsu08g00796 1885 PRINTS Disease resistance protein signature 350 364 - -
Tsu08g00796 1885 SUPERFAMILY RNI-like 1236 1490 - -
Tsu08g00796 1885 Coils Coil 1827 1861 - -
Tsu08g00796 1885 Gene3D Ribonuclease Inhibitor 737 1001 IPR032675 -
Tsu08g00796 1885 Gene3D Ribonuclease Inhibitor 1046 1312 IPR032675 -
Tsu08g00796 1885 Pfam NB-ARC domain 164 408 IPR002182 GO:0043531
Tsu08g00796 1885 Gene3D Ribonuclease Inhibitor 477 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00796 Tsu-Chr8 8497374 8506180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00796 182 522 WRKY Transcription Factor Family AT5G45050 26.271 3.42e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00796 - - mtr:MTR_3g062420 1573.91