Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00795 ATGAAACAACCAAAGCGAAGAACCATCGAGAGGAACCATCAAAAGGAAGAACCAAAGCTTACCAATCATATCCAATCCAACTCATCAGAACCAAACAGATGGCAGTCATTCGTTCACCAAATAGATTGTGATAATTCTCTcatatacaaattcaaattgcGAGCATTCGTTCACAGACAAATTATCATATGCACTGAATGTACGCAAAACAAGaTGGAAAGTTTCCTTAGTGATTTGGTGAAGCAATGTGGGGAGAAATTGATTAACAAGGCAATAGCAGAAGCACGTCATATATTATGCTTCACATGCATTGTTAAGGactttgaagaagaaagagataGGTTGGAACCAGAAAGGAGAACTATCGAGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAAGATATTCAAGCTAATGTTGTTTCTTGGGCAAAGGAAATTGATGAGCTCAATCAAGTggacacaaaaacaaaacaaacatgtttttttggattttgtcctgATTGTATGTGGCGATATAAAAAGGGAAAGGAGTTGACAAATAAAGTGAAGAGAATCAAAGAACTAAAGGGagagaaatttgaaaatattgaacTTCCTCGCCATGTTCCAGGTGTTGAACGCTATTCATTAAAAGATTacatttcttttgaaagtagagaagaaaaatacaaagaacTTTCTGATGCACTAAAAGATGACAACAACTATATAACCGGATTGCATGGGATGGGGGGCACCGGAAAGACTACATTGGCGTTTAAAGTGGGTAAAGACCTAAAGCAATCTGAACAATTTGCTTATGTCGTTGATACGATTGTGTCGTCTACTCctgatgtaaaaaaaattcaagatgaTATTGCTGGAACTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGGCACAAAAAACTAATTAGCAGATTAACAAAGGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGAATCAAGACCATCCTTTTAATTTTGATGCAATAGGGATTCCAGAACAGGGCAGTCACAAAGGCTGTAGAGTTCTTGTCACCTCACGTAGTCaagaaactttaaaaaatatggGTTGTGGTAAGATAATTGCATTGGGTCTTTTATCTGAAAAAGAAGCATGGAACATGTTTGAAAGGTATGCTGAGATATGTAATACCACCCCCAAAAAATTGATCGATAAGGGACGTCAAATTGCAAAGGAATGCAAACAATTaccaattgcaatttcagttATCGCCAGAAGTTTAAAGGGCCAGGAAAAACGAGAGCATAAGTGGGATGTGGCATTGAAATCCTTGAAGCAGCATGTATACAAGGATTGTGTTGATAATAATATGGCTGTAATTCATAACTGTTTGAAGATTAGCTATGATCAATTGATGGATGAAAAACTCAAGAGGTTGTTCCTCTTATGTTCGGTTTTccgagaagatgaagaaatttcTATTGAAGTTCTAACCAGACTTTGCATAGGAGTGAGTTTTTTTGGGGAAGATTGTCAATATTATAATGATGCTCGAAACGAAGTAGTTACAGCCAAAGATAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGTTGATGCAAAACGTGTAAAAATGCATGATATGGTTCGTGAGGCAGCTCAAGGGATAGCAAACAAAGAGATTCAATGTGtaaaattgtttgataaaaagCAAAAGTCATTGGTTGAAAAGCAGACAAATATCaaacatttattatttgaaggGAAGTACATGGATTTTTTTAACTTGAAATTTGATGGTTCCAAACTTGAGACTTTAATAGTCAAGCCGGATAGAGATGAAGAGTGCAAATGTATAGAAGTTCCGAATTCTTTCTTTGAAAATGTTATCAAGCTTCgtgttttgtatttttcagGCAATTACCAACAACCAGCTTTATCATTACCAGATTTAATTCAGTCATTGACCAATATTCGATCTATGTCGTTTGATAATGTGGATTTAGGTGACATCTCTATTTTGGGAAACCTACAAAATCTTGAGACTCTTGAGTTGGTTAGATGCAAAATCAATGAATTGCCAAATCAAATTACAGAACTGAAGAAGTTTAAATTGTTGAAGTTGGAATATTGCACAATCAGAAAGAATAATCCATTTGAAGTTATTAAAAGATGCACATCACTCGAAGAGCTGTATTTCAAATATAGTTTCAATGGTTTTTGTCAGGAAATAACCTTTCCTGAGTTGCAAAGATATTATATCAAATCAGATAGATGCTATTTTTTGGAGAgaaccaaaatttcaaaatatgtggtgttttatggtattgaaaagcGTCAACTTTCAGAAGAAACACTCAAGTACTGCCTGCAAACAGCAGAGGCTCTTTGTCTAAAAGGAATTAAGTGGGAATGGAGAAATCTCATGCCTAATATTGTTCTAGTAGAACATGGTATGAATGATCTTGGTCAACTTCAATTGGGTGGGATTTCACAACTACAGTGCCTCATTGACATCGTTGGTTCTCAAGTACCAAATGTCTTGTCCAACTTGGTAGATATATCAATCGGGGAATGTATACATTTGCAAAGCTTGTTTAAAGGTAAGCTAAATCTCTGCAGTCTAAAGACCATCCTACTTAGTAATTGCCCTGAGTTAGTTTCCCTATTTGAAGTGTCAACTTCTCGAAGCCTGGTGCTACTAGAGACATTGGAAATAGCTAACTGTGAGAAACTGGAAACCATAATAGCAGGTGAAAGAAGAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAGTTATGGTTCAGTGTTTTCGAAACTGAAAGTTATTGTTATTAATGAATGTCACCGATTAGAATCTATACTACCTTTCCTCTCTGCTCAAGACTTTCCAGCACTGGAAACTATCAGAATAAGAAAATGTGATGGATTGAAATATGTGTTTGGCAAATCCCAACATGTTGAACTGGTTTTGCTAAGTGAATTAGAGCTCTCTGAATTACCAAACTTCATTGGTATTTTTAAAGAATGTAATCATCTCATGTCTTCATGCGTGAAGGGATCATCTTCCACTTCCAATTATGGTTCCAAAGCAGAAATACAATTGGATCCTATCAAATCCAATACCTTCTCTTGGTGGACTCGTATATGTTGTCATACCACAATCCCATtggttgatgatgttgatgggGATCAACTACATGACAACGCAGTGGCAACAGTTAACTGCTTTGTAAAGTTAGTTACAAGTTGTTATGAAGTTAGTTACAAGTAG 3258 0.329 MKQPKRRTIERNHQKEEPKLTNHIQSNSSEPNRWQSFVHQIDCDNSLIYKFKLRAFVHRQIIICTECTQNKMESFLSDLVKQCGEKLINKAIAEARHILCFTCIVKDFEEERDRLEPERRTIEQRVKVAKERDKDIQANVVSWAKEIDELNQVDTKTKQTCFFGFCPDCMWRYKKGKELTNKVKRIKELKGEKFENIELPRHVPGVERYSLKDYISFESREEKYKELSDALKDDNNYITGLHGMGGTGKTTLAFKVGKDLKQSEQFAYVVDTIVSSTPDVKKIQDDIAGTLGLKWEDCNESDRHKKLISRLTKGDKILVILDDVWNQDHPFNFDAIGIPEQGSHKGCRVLVTSRSQETLKNMGCGKIIALGLLSEKEAWNMFERYAEICNTTPKKLIDKGRQIAKECKQLPIAISVIARSLKGQEKREHKWDVALKSLKQHVYKDCVDNNMAVIHNCLKISYDQLMDEKLKRLFLLCSVFREDEEISIEVLTRLCIGVSFFGEDCQYYNDARNEVVTAKDKLVDSCLLLEVDAKRVKMHDMVREAAQGIANKEIQCVKLFDKKQKSLVEKQTNIKHLLFEGKYMDFFNLKFDGSKLETLIVKPDRDEECKCIEVPNSFFENVIKLRVLYFSGNYQQPALSLPDLIQSLTNIRSMSFDNVDLGDISILGNLQNLETLELVRCKINELPNQITELKKFKLLKLEYCTIRKNNPFEVIKRCTSLEELYFKYSFNGFCQEITFPELQRYYIKSDRCYFLERTKISKYVVFYGIEKRQLSEETLKYCLQTAEALCLKGIKWEWRNLMPNIVLVEHGMNDLGQLQLGGISQLQCLIDIVGSQVPNVLSNLVDISIGECIHLQSLFKGKLNLCSLKTILLSNCPELVSLFEVSTSRSLVLLETLEIANCEKLETIIAGERREDEEIDDGGNNKSYGSVFSKLKVIVINECHRLESILPFLSAQDFPALETIRIRKCDGLKYVFGKSQHVELVLLSELELSELPNFIGIFKECNHLMSSCVKGSSSTSNYGSKAEIQLDPIKSNTFSWWTRICCHTTIPLVDDVDGDQLHDNAVATVNCFVKLVTSCYEVSYK 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00795 1085 Pfam NB-ARC domain 223 463 IPR002182 GO:0043531
Tsu08g00795 1085 Gene3D Ribonuclease Inhibitor 529 756 IPR032675 -
Tsu08g00795 1085 Gene3D - 372 466 IPR042197 -
Tsu08g00795 1085 Gene3D - 212 368 IPR027417 -
Tsu08g00795 1085 Gene3D Ribonuclease Inhibitor 799 1026 IPR032675 -
Tsu08g00795 1085 MobiDBLite consensus disorder prediction 1 31 - -
Tsu08g00795 1085 PANTHER - 137 1005 - -
Tsu08g00795 1085 SUPERFAMILY L domain-like 537 999 - -
Tsu08g00795 1085 PRINTS Disease resistance protein signature 311 325 - -
Tsu08g00795 1085 PRINTS Disease resistance protein signature 238 253 - -
Tsu08g00795 1085 PRINTS Disease resistance protein signature 407 421 - -
Tsu08g00795 1085 PRINTS Disease resistance protein signature 863 879 - -
Tsu08g00795 1085 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 137 1005 - -
Tsu08g00795 1085 Coils Coil 105 125 - -
Tsu08g00795 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 477 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00795 Tsu-Chr8 8471722 8480458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00795 239 879 WRKY Transcription Factor Family AT5G45050 22.604 2.60e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00795 - - cam:101507086 1068.91