Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00787 ATGAGGCAATTGGCCGCTGGGTTGCAAGTGCTTCAAGAAAAGAACCTCATACATCGAGATTTAAAACCACAGAACTTACTGTTAGCCACTACATCAGCTACGCCACTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCTCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCTGAGATAATTCAGAGTCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAGCTAGTTGTCGGTAAACCACCATTTGATGGAAATAGTCAATTGCAGctttttcaaaatattttggcATCCACGGAACTGCATTTTCCACCAACGATTTTAAAAGAGATACATCCCGATTGTGTGGATCTTTGCAGAAGCCTTTTACGTCGAAATCCAGATGAGAGATTAACATTCAAGGCGTTCTTCGATCACAATTTCCTACAGGAACACAGGTCCGGCATGAATATTGAGCAGTTTCATTCACATCAATCAGAAACCTCAATGGTTAATCAAGCACATTTTGAGTATGATGCCGAGACTTTTGTCAATGATCCAGTGGTAGTCAGTTCAATGGTCAATGAGAATGCTACAGGGTTGACTCCAACTAGTACACTCGATAAGCCGGGAAAGTCCATTCGTACCGATACTCATTTGTCAAACCAAGCTCAAGTTTCCCACTTAATGGAGTCCATTGAGAAAGGTTATGTCCTCATCAATTCTCATTTTGCATCATTGGAGGATTTCTCTGTCTACTTTGAAGCATCCATGCAAGAAAATCCCTCAAGCAGCGTTTCTATCTCCCCTTCAAAGCAAACTAAGGATCTGCCGTCTTCCTCCGCTGCCGGATTAGACAATTTTAAAAGCAATGAACTTGAGGAATTTGTAGCATCCTTTGAATTTGCTACCTTAAGGAAAGAGAGGGAATTTTCTCTACAGCACCCTTCAAACAGGTTAGAGTTGTTGCATCGGTATGTTCAAGTCCTTGGAGAACTTTCGCAAGAAAAGTATAACACAGGATCGTATCTAGAATCACTTGCGGTTGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGACATTTGTAGCACTTGGATACCCCCCATTTCTGAGGGTGAGTTGCCTCAAAGCAGTTATGTTGACGGATCCATAATTGCCTGTGGAGACGCGGGCTTACCACAGACTACGGAACAGGAAATAAATTTTAGTGACCGTCTTTCCGTCTCCTTGTGGGCCAAACGTGGATTTATTATTGCAGTTGATCGTGCTGAGAAACTATCATGTCATATTCAAAACATGGATGGTGCAGTTGAGATGCCAGATGCAATGGAGATTATATTCCAAGAAGCACTCTTAATTGGGACAAATGGTGCTGTAGATGAGTATATGAATAACAAAGATAAATCTTCTGCATCATACTCAAAAGCAATGCTTCTACTTTCGTTTATTGTGGGAGAAGCGGAGAACCTTCCACTGAATCCTCCATTTTCACTTCTTGCTGATGATCGGAAGCGAATCATGCAATATATTCACAACTTGCAGTTTCGCAAAAAGTCTTTGTCAGAGTCCACTTCAAAGGAATGA 1611 0.4122 MRQLAAGLQVLQEKNLIHRDLKPQNLLLATTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPPTILKEIHPDCVDLCRSLLRRNPDERLTFKAFFDHNFLQEHRSGMNIEQFHSHQSETSMVNQAHFEYDAETFVNDPVVVSSMVNENATGLTPTSTLDKPGKSIRTDTHLSNQAQVSHLMESIEKGYVLINSHFASLEDFSVYFEASMQENPSSSVSISPSKQTKDLPSSSAAGLDNFKSNELEEFVASFEFATLRKEREFSLQHPSNRLELLHRYVQVLGELSQEKYNTGSYLESLAVELVVLAIWKKALDICSTWIPPISEGELPQSSYVDGSIIACGDAGLPQTTEQEINFSDRLSVSLWAKRGFIIAVDRAEKLSCHIQNMDGAVEMPDAMEIIFQEALLIGTNGAVDEYMNNKDKSSASYSKAMLLLSFIVGEAENLPLNPPFSLLADDRKRIMQYIHNLQFRKKSLSESTSKE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00787 536 MobiDBLite consensus disorder prediction 270 291 - -
Tsu08g00787 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Tsu08g00787 536 PANTHER BNAC06G18300D PROTEIN 1 519 - -
Tsu08g00787 536 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 519 IPR045269 GO:0004674|GO:0006914
Tsu08g00787 536 Gene3D Transferase(Phosphotransferase) domain 1 1 198 - -
Tsu08g00787 536 Pfam Protein kinase domain 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00787 536 SMART serkin_6 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00787 536 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00787 536 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00787 Tsu-Chr8 8420735 8425702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00787 1 165 EF-hand Containing Proteins AT5G12480 32.121 3.19e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tsu08g00787 Pkinase 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00787 - K08269 mtr:MTR_8g024100 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00787 08 8420735 8425702 Tsu08g00787 08 8420735 8425702 ECH