Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00786 ATGACATTTTTTCTTACAATAATTTTTCAACTTCTTTTGTTCTTTCCTTTAACATCTTCCTTAGTTGAACCatctttgcttcaaaaaaattcGTGCAATGAAACATGTGGAAAACTTCATATTCCATTTCCATTCTACATCAACAAAACTTCATGTTCATCACTCTCAACCTCTTTCCAACTAACTTGTTCAAATTCATCCACCCTTTTGATCAAAATAGGTTCACAAAACTATCCCATTTTAGAATTCTTCTCAGATGGTTTATTAGTAGACTTTCCCGGAACATCATCATGTCGCCAATACAACGATTTGAATTCATTCGGCGAGAGGTTTTTCGATGGAAAAAACTACTTTGGTGTATCAGTTGATAATGTTGTTGGTTTATATGATTGTGAAGATTCTTCACTTTGTAAAGCAGATTGTGAAACAGTTAATCTTCCTGGTTGTGATGGAAGTGTTGGTGGTGGTTCTCTTGGATGTTGTTATCCACTTTCTGATCATACTATATGGCATATTGGTGAAGGTTTTTCTGTCTTTTCAAAATTTGGATGTAGGGGATTTTCTAGTTGGACTGTTTTAAGAGGTTCTTATTCAGGTAAAagaggggtaaaattggaatttgGTATTCCTAGGAACTTGTCTAAGGAGATTTGTGCTAAGAATGCAGATATGGTGAATGCTACTTCAATTAAAGGTGGTGTAAGATGTGTTTGTGAAGATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGCTTATTGTCATGCATCAAAAATGGAAAGGAAGCATATGGAAGTGATTGCTACATCAAAAGACATGATCAAAGAAAAATGGTCATCATTGCTGGAATCCTTTGTCCAATTCTTATTGTTGCATCCTTAGTTGCACTATTCTATCttctaaaaagaaaacaaaaaccaGGAATGTTCGATTCCGAGCAAGCATATTACCACAACATTTCATTCCGAAAAGCATGTAGAACTCGACTTTTCAGCCACCATGAGCTAGAAGAAGCCACCAATGGTTTTGAAGATAGCAGAAAACTCATGCAATGCAACAACAGCACAATTTTTGCTGGTGTTATTGGTGATGGATCACATGTAGCTATACACAAGTTATCCAAATGCGAGAACGATAAAGATATGATGCAAGTCATGTCACAAATTGAAGTGTTATCTTCTATTGTACATAGAAATGTTGCATCAATCATTGGTTGTTGCATTGATTCTAACTACACACCTTTAGTTGTTTATGAATATCCTGCAAATGGTACCTTGGAGGATCATTTACACCAAAACAAAGGacaaaaatggcaaaaacatGGTTTTTTAGATTGGTATAGAAGATTGAATATTGCAACAGAAATAGCTAGTACTATTGCATTGTTACATTATGATAAATCTCCTCCAATATTTCATCATAACCTAAAGTCTAGTTGCATATTCCTAGATGATGATTTTTCAGTCAAGATTGCAGGATTTGGAATACTTAATTATGATAACAAGAATTGCGAAAATCGCGAACGGTTTCGCTTGTGCAAAAATGATGTCTATGACATAGGTGTGTTACTACTTGAGATAATCCATGGATCAAATCAAATGGACTCACCTACATTAGCCTTGAAGAAAATCAGAGACGGAAAGATCGAAGAAATTGTTGATCCGCTTCTTAATTATCACGATCAACCGCGGACTTGTCAAGAACAAATACTTATCTTTGCTGATCTTGCAACAAGATGTTTGCTATTTAGTGGAGATGGAAAAATGGGGATGATTGATGTTGCAAGAGAATTGGTTCATTTGAGTAAAGATAGTGTTGATGGTGGAAATGTGAAAGGACTTGTTCTTGAAGAAACATTCTCAAATTCAAGTCTTCTTCAAATGATATCTTTGTCTCCTGATTCTATGAATGTTCCTTGA 1923 0.3385 MTFFLTIIFQLLLFFPLTSSLVEPSLLQKNSCNETCGKLHIPFPFYINKTSCSSLSTSFQLTCSNSSTLLIKIGSQNYPILEFFSDGLLVDFPGTSSCRQYNDLNSFGERFFDGKNYFGVSVDNVVGLYDCEDSSLCKADCETVNLPGCDGSVGGGSLGCCYPLSDHTIWHIGEGFSVFSKFGCRGFSSWTVLRGSYSGKRGVKLEFGIPRNLSKEICAKNADMVNATSIKGGVRCVCEDGYVGDGFANGTGCLLSCIKNGKEAYGSDCYIKRHDQRKMVIIAGILCPILIVASLVALFYLLKRKQKPGMFDSEQAYYHNISFRKACRTRLFSHHELEEATNGFEDSRKLMQCNNSTIFAGVIGDGSHVAIHKLSKCENDKDMMQVMSQIEVLSSIVHRNVASIIGCCIDSNYTPLVVYEYPANGTLEDHLHQNKGQKWQKHGFLDWYRRLNIATEIASTIALLHYDKSPPIFHHNLKSSCIFLDDDFSVKIAGFGILNYDNKNCENRERFRLCKNDVYDIGVLLLEIIHGSNQMDSPTLALKKIRDGKIEEIVDPLLNYHDQPRTCQEQILIFADLATRCLLFSGDGKMGMIDVARELVHLSKDSVDGGNVKGLVLEETFSNSSLLQMISLSPDSMNVP 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00786 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 41 635 IPR045274 GO:0007166
Tsu08g00786 640 Gene3D Transferase(Phosphotransferase) domain 1 423 509 - -
Tsu08g00786 640 Gene3D Transferase(Phosphotransferase) domain 1 510 613 - -
Tsu08g00786 640 Pfam Protein tyrosine and serine/threonine kinase 349 502 IPR001245 GO:0004672|GO:0006468
Tsu08g00786 640 PANTHER OS10G0351500 PROTEIN 41 635 - -
Tsu08g00786 640 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Tsu08g00786 640 ProSiteProfiles Protein kinase domain profile. 344 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00786 640 SUPERFAMILY Protein kinase-like (PK-like) 327 599 IPR011009 -
Tsu08g00786 640 Pfam Wall-associated receptor kinase galacturonan-binding 32 83 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00786 Tsu-Chr8 8411474 8414519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00786 32 602 Receptor kinase-like Gene Family AT2G23450 28.180 4.74e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Tsu08g00786 PK_Tyr_Ser-Thr 1.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00786 - - vra:106760020 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00786 08 8411474 8414519 Tsu08g00786 08 8411474 8414519 ECH