Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00779 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTGTTGCCATCTCAACTCCAAGGCATAAGAATGGATCACCATTGGGAACCTCAAAAGCTTTTCTTGGGAGGAAACTGAGGGTGAACAACAACACATCAGCACCACTTAGAGTAAGGTCTACCACAACAGTGTGTGCAGTAGCTGAGCCTGATAGACCTTTGTGGTTCCCAGGAAGCGTCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGATTTTGGATTTGATCCTCTTGGACTTTCATCTGATCCAGAGAGTCTGAAATGGAATGTTCAAGCAGAGCTTGTACACTGCAGATGGGCTATGTTAGGTGCAGCAGGAATTTTCATTCCAGAATTCCTAACAAAGCTTGGTATCTTAAACACACCTTCATGGTACACTGCTGGAGAGCAAGAGTATTTCACAGACACAACCACACTTTTCATAGTTGAGCTTATTTTCATCGGTTGGGCCGAGGGTAGGAGATGGGCTGACATCCTTAATCCAGGTTGTGTCAACACTGACCCTATCTTTCCAAACAACAAGCTCACAGGAACTGATGTAGGGTACCCTGGTGGACTTTGGTTTGATCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTTAAGGAGTTGAGAACAAAGGAAATTAAGAATGGAAGATTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAGCACATTTACACTGGCACTGGTCCTATCGATAACCTCTTTGCTCATCTTGCTGATCCTGGTCATGCTACTATTTTCGCTGCATTCACTCCCAAGTGA 807 0.4622 MASACASSAIAAVAISTPRHKNGSPLGTSKAFLGRKLRVNNNTSAPLRVRSTTTVCAVAEPDRPLWFPGSVPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00779 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Tsu08g00779 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 268 IPR001344 GO:0009765|GO:0016020
Tsu08g00779 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 268 - -
Tsu08g00779 268 SUPERFAMILY Chlorophyll a-b binding protein 60 266 - -
Tsu08g00779 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00779 Tsu-Chr8 8262794 8264994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00779 44 268 Chloroplast and Mitochondria Gene Families AT3G61470 88.496 5.64e-149 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00779 K08908 - gmx:100802138 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00779 08 8262794 8264994 Tsu08g00779 08 8262794 8264994 PCT