Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00768 ATGGATCAACATTACGACTATCCCAAAGATAAGGAAAACGAGATGGCAAGTTTCCTCTGTGATTTGGTGAAGCCATATGTAGAGAAATTGATTAATGGGGCAATAGCAGAAGCACATCATGTATTTTGCTTCACATGCATTGTTAaggaatttgaagaagaaagagcTAGGTTGGAACCAGAAAGGAGAACCATCGAGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAAGATATTCAAGCTAATGTTGATTCTTGGGAAGAGGAAATTGTTAAGCTCAATCAAGTggacacaaaaacaaaacaaacatgtttttttggattttgtcctgATTGTATATGGCGATATAAAAAGGGAAAGGAGTTGGGAAATAAAGTGAAGAGGATCAAAGAACTAAAGGGagagaaatttgaaaatattgaacTTCCTCGCCATGTTCCAGGTATTGAACGCTATTCATCAAAAGATTACATTTCTTTTAAAAGCAGAGAGGCAAAATACAAAGAACTTTTGGATGCACTAAAAGATGACAACAACTACATAATCGGATTGCAAGGGATGGGTGGCACCGGAAAGACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAAGCTGGACAATTTGCTCATGTCGTAGATACGACTGTGTCATTTACTcctgatataaaaaaaattcaagatgaTATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACACAAAAAATTGTGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCCACATCTTGATTTTGAGGCAATAGGGATCCCAAAACGAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAGTAAAAGAACTTTCGACATAATGGGTTGTCATAAGACAACTCAATTGGATCTTTTATCTGAAGAAGAAGCGTGGACCATGTTCGAAACGTATGCCGGGATATCTAATAGCGATTCAAAAAAGTTGATCAATAAGGGACGTAAAATTGCAAAGGAATGCAAACAATTACCTGTTGCAATTTCAGCTATCGCCAGCAGCTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAAAAGCAACCTGGATCCATGCttggtgttgatgatgatatGGTTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGTCATGCGGTTGTTCCTCTTATGTTCGGTTTTccgagaagatgaagaatactCTGTTGAATATCTAACCAGACTTTGCATAGGAGTGGGTCTTTTTAGGGATGATGCTGACATGTATAATGATGCTCGAAACAAAGTAGTTGTAGCCAAAAACAAGCTCGTAGATTCTTGTTTGTTGTTAAAGGTCAATGCAAAGCGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATTGCGAACGAAGAGATTCAATGTGTAAAATTGTTTGATACAAAGCAAAAGTCATTGGTTGTGGAAATTAGAATGAATAATCCATTTGAAGTTATTGAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAAGATAGTTTCAATGATTTTTGTAAGGAAATAACCTTATCTGAGTTGCAAAGATATCATATCAATTTTGATAGATATTTGGAGGGAATTTCCAGATTTCCCAAATATGTTGTGTTTTctggtgatgaagatgaagcgTGTCAATTTTCAGAACAAACACTCAAGTACTGTATGCAAACAGCAAATTCTCTTTATCTAGAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATTGTTTCTGTAGAACTAGGTATGAATGATCTTGTTGAACTTCATTTAGTTGAGATTTCACAACTACAGTGCCTCATTGACACCAATGGTTCTCAAGTACCAGATGTCTTGTCCAACTTGGTTGTACTAGAATTGGAAATAATGGAAAATTTGGAAGAACTATTCAATGGACCCCTTTCCTTTGAATCTTTGAACAATTTAGAAAAGCTATCAATCAAGGATTGtatcgtataa 2076 0.3386 MDQHYDYPKDKENEMASFLCDLVKPYVEKLINGAIAEAHHVFCFTCIVKEFEEERARLEPERRTIEQRVKVAKERDKDIQANVDSWEEEIVKLNQVDTKTKQTCFFGFCPDCIWRYKKGKELGNKVKRIKELKGEKFENIELPRHVPGIERYSSKDYISFKSREAKYKELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQAGQFAHVVDTTVSFTPDIKKIQDDIAGSLGLKWEDCNESDRHKKLWSRLTNGDKILVILDDVWDRGPHLDFEAIGIPKRDNHKGCRVLVTSRSKRTFDIMGCHKTTQLDLLSEEEAWTMFETYAGISNSDSKKLINKGRKIAKECKQLPVAISAIASSLKGQQNREHEWDVTLKSLKKQPGSMLGVDDDMVGIYNCLKISYDNLKDEKVMRLFLLCSVFREDEEYSVEYLTRLCIGVGLFRDDADMYNDARNKVVVAKNKLVDSCLLLKVNAKRLKMHDLVRDAAQWIANEEIQCVKLFDTKQKSLVVEIRMNNPFEVIERCSSLEELYFKDSFNDFCKEITLSELQRYHINFDRYLEGISRFPKYVVFSGDEDEACQFSEQTLKYCMQTANSLYLEGIKGEWRNLMPEIVSVELGMNDLVELHLVEISQLQCLIDTNGSQVPDVLSNLVVLELEIMENLEELFNGPLSFESLNNLEKLSIKDCIV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00768 691 Gene3D - 315 410 IPR042197 -
Tsu08g00768 691 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 519 689 - -
Tsu08g00768 691 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 81 509 - -
Tsu08g00768 691 Gene3D - 144 314 IPR027417 -
Tsu08g00768 691 Coils Coil 48 89 - -
Tsu08g00768 691 PANTHER - 81 509 - -
Tsu08g00768 691 PANTHER - 519 689 - -
Tsu08g00768 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 420 IPR027417 -
Tsu08g00768 691 PRINTS Disease resistance protein signature 350 364 - -
Tsu08g00768 691 PRINTS Disease resistance protein signature 254 268 - -
Tsu08g00768 691 PRINTS Disease resistance protein signature 181 196 - -
Tsu08g00768 691 PRINTS Disease resistance protein signature 649 665 - -
Tsu08g00768 691 CDD SIMIBI 181 265 - -
Tsu08g00768 691 Pfam NB-ARC domain 167 408 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00768 Tsu-Chr8 8162245 8169530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00768 182 502 WRKY Transcription Factor Family AT5G45050 26.048 2.87e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00768 - - mtr:MTR_3g031750 682.174