Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00763 ATGTTCATGTTATACACTTTCAGAATCCTAAATGAGTTGGACAAACCTCTTATCTTAGATTTCTTTGCTATGTCTTTGCTCCTTAGTACAGAAAACGAGATGGCAAGTTTCCTCTGTGATTTGGTGAAGCCATATGTAGAGAAATTGATTAATGGGGCAATAGCAGAAGCACATCATGGAAAGAAGTTGGCAAATAAAGTGAAGAGGATCAAAGAACTAAAAGGAGAGAAATTTGAAAACATTGAACTTCCTCGCCATCTTCCAGGTGTTGAACGCTCTTCATCCGAAAATTACATTTCTTTTAAAAGCAGAGAGGCAAAATACAGAGAACTTTTGGATGCACTAAAAGATGACAACAACTATATAATCGGATTGCAAGGGATGGGGGGCACCGGAAAGACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAAGCTGGACAATTTGCTCATGTCGTAGATACGACTGTGTCATTTACTcctgatataaaaaaaattcaagatgaTATTGCTGGATCTTTAGGATTGAAATGGGACGATTGTAATGAATCAGACCGACACAAAAAACTGTGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCCACATCTTGATTTTGAGGCAATAGGGATTCCAAAACGAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAGTAAAAGAACTTTCGACATAATGTGTTGTCATAAGACAATTGAATTGGATCTTATATCTGAAGAAGAAGCGTGGACCATGTTTGAAATGTATGCCGGGATATCTAATAGCGAGTCAAAAAAGTTGATCAATAAGGGACGTAAAATTGCAAAGGAATGCAAACAATTACCTGTTGCAATTTCAGCTATCGCCAGCAGCTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAGCAGCCTGTATCCATGCATGGTGTTGATGACGATGTGGTTGGAGTTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGAGGAAAATGTCATGCGGTTGTTCCTCTTATGTTCGGTTTTccgagaagatgaagaatactCTGTTGAATATCTAACCAGACTTTGCATAGGAGTGGGTCTTTTTAGGGATGATGATTACACGTATAATGATGCTCGAAACAAAGTAGTTGTAGCCAAAAACAAGCTCGTAGATTCTTGTTTGTTGTTAAAGGTCGATGCGAAGCGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATTGCGGACAAAGAGATTCAATGTGTAAAATTGTTTGATACAAAGCAAAAGTCATTGGTAGAAAATCAGACaaatatgaaatatttattatgtGAAGGGAAGTGCATGGATATTTTTAACTTGAAATTTGATGGTTCCAAACTTGAGACTTTAATAGTCAAGGTGGATAGAGATGAAGACCGCAAATGTACAGAAGTTCCAAATTCTTTCTTTGAAAATGTTATCAAGCTTCGTGTTTTGTATATTTCAGGCAATTACCAACAACCTTTATCATTACCAGATTCAATTCGATCATTGAGAAATATTCGATCTATGTCGGTTGATCATGTGGATTTAGGTGACATCTCTATTTTGGGAAAACTACAAAGTCTGGAGACTCTTGATTTGGTTGGATGCAAAATCAATGAATTGCCAAACCAAATTATAAACCTGGGGAAGTTTAAATTGTTGAAGTTGAAAAGATAG 1761 0.3629 MFMLYTFRILNELDKPLILDFFAMSLLLSTENEMASFLCDLVKPYVEKLINGAIAEAHHGKKLANKVKRIKELKGEKFENIELPRHLPGVERSSSENYISFKSREAKYRELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQAGQFAHVVDTTVSFTPDIKKIQDDIAGSLGLKWDDCNESDRHKKLWSRLTNGDKILVILDDVWDRGPHLDFEAIGIPKRDNHKGCRVLVTSRSKRTFDIMCCHKTIELDLISEEEAWTMFEMYAGISNSESKKLINKGRKIAKECKQLPVAISAIASSLKGQQNREHEWDVTLKSLKQPVSMHGVDDDVVGVYNCLKISYDNLKEENVMRLFLLCSVFREDEEYSVEYLTRLCIGVGLFRDDDYTYNDARNKVVVAKNKLVDSCLLLKVDAKRLKMHDLVRDAAQWIADKEIQCVKLFDTKQKSLVENQTNMKYLLCEGKCMDIFNLKFDGSKLETLIVKVDRDEDRKCTEVPNSFFENVIKLRVLYISGNYQQPLSLPDSIRSLRNIRSMSVDHVDLGDISILGKLQSLETLDLVGCKINELPNQIINLGKFKLLKLKR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00763 586 CDD SIMIBI 122 156 - -
Tsu08g00763 586 Gene3D - 79 253 IPR027417 -
Tsu08g00763 586 Gene3D - 257 350 IPR042197 -
Tsu08g00763 586 Gene3D Ribonuclease Inhibitor 419 586 IPR032675 -
Tsu08g00763 586 Pfam NB-ARC domain 107 348 IPR002182 GO:0043531
Tsu08g00763 586 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 57 579 - -
Tsu08g00763 586 SUPERFAMILY L domain-like 421 584 - -
Tsu08g00763 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 360 IPR027417 -
Tsu08g00763 586 PRINTS Disease resistance protein signature 551 567 - -
Tsu08g00763 586 PRINTS Disease resistance protein signature 291 305 - -
Tsu08g00763 586 PRINTS Disease resistance protein signature 122 137 - -
Tsu08g00763 586 PRINTS Disease resistance protein signature 195 209 - -
Tsu08g00763 586 PANTHER - 57 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00763 Tsu-Chr8 8092133 8099091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00763 123 564 WRKY Transcription Factor Family AT5G45050 24.510 1.09e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00763 - - cam:101507086 664.455