Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00757 ATGTCGGTGGATCCATGGCTGATGCTGATGTTGATGTTCTTCATCATCAGCACTTGTACTCTTGTTATCAATGGTGACACAGATCCAAATGATGCTTCTGTTTTAATGAATTTGTTTCAAAGCATGAACTCACCGTCCCAGCTAAATTGGCAAACCAATGGCAATAATGATCCTTGTGGACAATCTTGGACAGGCATCACTTGCTCAGGCAACCGAATCACCGAAATTAAGTTACCTGGTCATCAATTATCCGGAACTTTGAGTTACAATCTAGGATCCTTGTCAGCTCTGACCAACCTAGATTTGAGTAACAACAATCTCGGTGGCACTATACCTTACTCGTTTCCTCAAACATCATTGCAGCACTTAAATCTTgctaataataatttcaatggAGGGATACCTTATGTGTTTTCTGATATTCCTTCTCTTATAAGCCTGAATCTTGCTCACAATCAACTTCAACAAGGACTGACAATGAGCTTTCAAAAGCTTACTTCCCTTACTACATTGGACGTTTCTTCCAATTCTTTTACCGGAGACCTCCCTCAGACTATGAGCTCACTATCAAGCATAAACACCATGAATCTACAAAACAACCAATTTACAGGAACCATTGATATCCTTGCTGCTCTTCCTCTTCAAAATTTGAATATCGAAAACAATCATTTTACTGGCTGGATACCAGACCAGTTGAAAAACATAAACCTACAAAAGAATGGTAATTCATGGAGCTCTGGACCTGCACCCCCACCTCCTCCTGGTACACCTccaataaacaaaaacaacggTGGTCACAAGTCTAGTGAACATAAAACCTCATCAGGTTCTAGTTCAAGTGATGGAAGCAAAAAATCTGGTATAGGAGGTGGAGCCATTGCTGGGATAGTGATCTCTATCTTAGTTGTTGGTGCAATAGTAGCAATCTTTCTAGTGAAGAAAAGATCCAAGAAGTCGTCTGGAGATGTGGAAAAGCTAGACAATCGACCCTTGGCTCCTCATACTTCAAATGAAGTGCATGAAATGAATTCAACGCAAACGTCTTCTGTAATTGACTTGAAGACATTTGATACTTCTGCGGCCTCAATAAATCTTAAACCCCCTCCTCATAAATCATTTGATGAAGACGAGTTTCCAAAGAAGCCCGCTGTTGTCAAGAAGATCGTAGCACCACCTCCAAATCTGAAATCATATTCTATTGCTGACCTACAGATTGCTACCGGAAGCTTTAGTGTGGATCAACTTATTGGTGAGGGATCTTTTGGACGTGTATACCGTGCACAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCGAATAATTTGTCTGAAGATTTTATGGAGATAGTTTCTGATCTCTCCCGTTTGCATCATCCGAATGTGACGGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTCTTAGTCTATGAGTTCCACAAAAATGGATCACTGCATGAATTCCTTCACCTCCCTGATGAGTTCATTAAACCATTGATATGGAATTCTCGTGTCAAGATTGCTTTGGGAATTGCACGCGCTTTAGAGTACCTACATGAAGTTTGTTCGCCATCAGTTGTTCATAAGAATATAAAGGCAGCCAACATATTGCTTGATACTGATCTTAATCCTCATCTATCAGACAGTGGATTGGCCAGCTATATTCCAAATGCAAACCAGGTATTGAACAATAATGCCGGATCTGGATACGAAGCTCCAGAAGTTGGGATGTCTGGTCAGTATACTCTTAAGAGTGATGTCTATAGCTTTGGAGTTGTCATGTTGGAGCTTCTAAGTGGACGGAAACCATTTGATAGTTCAAGATCAAGATTTGAGCAGTCGTTGGTTCGATGGGCGACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGACTATACCCTGTAAAGTCTCTTTCTCGATTCGCTGATGTCGTTGCTCTTTGTGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTAGTTCGATTAGTGCAACGAACCAACATGAGCAAACGGACATTTGGAACTGATCAAGGAGGATCCAACCGAGGGGGCGATGACCAAGACACCCTAGACATGTAA 2148 0.4092 MSVDPWLMLMLMFFIISTCTLVINGDTDPNDASVLMNLFQSMNSPSQLNWQTNGNNDPCGQSWTGITCSGNRITEIKLPGHQLSGTLSYNLGSLSALTNLDLSNNNLGGTIPYSFPQTSLQHLNLANNNFNGGIPYVFSDIPSLISLNLAHNQLQQGLTMSFQKLTSLTTLDVSSNSFTGDLPQTMSSLSSINTMNLQNNQFTGTIDILAALPLQNLNIENNHFTGWIPDQLKNINLQKNGNSWSSGPAPPPPPGTPPINKNNGGHKSSEHKTSSGSSSSDGSKKSGIGGGAIAGIVISILVVGAIVAIFLVKKRSKKSSGDVEKLDNRPLAPHTSNEVHEMNSTQTSSVIDLKTFDTSAASINLKPPPHKSFDEDEFPKKPAVVKKIVAPPPNLKSYSIADLQIATGSFSVDQLIGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNNLSEDFMEIVSDLSRLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHEFLHLPDEFIKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKAANILLDTDLNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDTLDM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00757 715 Gene3D Transferase(Phosphotransferase) domain 1 489 703 - -
Tsu08g00757 715 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00757 715 PRINTS Leucine-rich repeat signature 141 154 - -
Tsu08g00757 715 PRINTS Leucine-rich repeat signature 97 110 - -
Tsu08g00757 715 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Tsu08g00757 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 17 712 - -
Tsu08g00757 715 MobiDBLite consensus disorder prediction 319 347 - -
Tsu08g00757 715 Pfam Protein tyrosine and serine/threonine kinase 412 682 IPR001245 GO:0004672|GO:0006468
Tsu08g00757 715 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Tsu08g00757 715 CDD STKc_IRAK 416 685 - -
Tsu08g00757 715 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Tsu08g00757 715 MobiDBLite consensus disorder prediction 693 715 - -
Tsu08g00757 715 MobiDBLite consensus disorder prediction 261 285 - -
Tsu08g00757 715 SUPERFAMILY Protein kinase-like (PK-like) 391 682 IPR011009 -
Tsu08g00757 715 Gene3D Ribonuclease Inhibitor 141 247 IPR032675 -
Tsu08g00757 715 PANTHER OS01G0253100 PROTEIN 17 712 IPR045271 GO:0004714|GO:0006468
Tsu08g00757 715 MobiDBLite consensus disorder prediction 238 286 - -
Tsu08g00757 715 MobiDBLite consensus disorder prediction 693 707 - -
Tsu08g00757 715 Gene3D Ribonuclease Inhibitor 30 140 IPR032675 -
Tsu08g00757 715 SUPERFAMILY L domain-like 27 234 - -
Tsu08g00757 715 Gene3D Phosphorylase Kinase; domain 1 377 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00757 Tsu-Chr8 8015352 8021340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00757 6 714 Strubbelig Receptor Gene Family AT1G53730 64.730 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tsu08g00757 PK_Tyr_Ser-Thr 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00757 - - gmx:100780323 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00757 08 8015352 8021340 Tsu08g00757 08 8015352 8021340 ECH
Tsu08g00757 08 8015352 8021340 Tsu08g00757 08 8015352 8021340 PCT