Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00710 ATGGACGACGACGACGAGATCCATTCCAATCCATCACCGTTGAGCGGATCTCCGGTGTCATCACCGGGAGCAATTGGTCGGGTTTCGGTGACGGTTGCTGCACCGGCACCGGAATCTCATCCGGCGATGAACAGCTATGCATTAGCGCTTCCGATTCAGAATCAGGTAAGAGGAAACAACGGTGGAGGGAGGGAGGATTGTTGGAGCGAAGGCGCGACGGCGGTTCTGATCGAAGCGTGGGGAGAGAGATATATGGAATTGAGCAGAGGGAATCTGAAGCAAAAGCATTGGAAAGAGGTGGCGGAGATCGTTAACGGAAGAGAAGATTATTTGAAAGCTCCGAAAACCGATATTCAGTGCAAAAATCGGATCGATACTGttaagaagaaatataaatcgGAGAAAGCTAAGATCGCCGCCGGTAGCGGCATCACAAGCAGTAAATGGCCGTTTTATGACCGATTAGATCAGTTGATCGGTCCAACCGCTAAGATCACCGGTAGCACATCCGCCGGTAACAGTAATTTACCACCGCAAAGAGTTCCGATAGGTATTCCGGTCGGTCTTCGAACCGGTGGTGGTGCAAATCAGTTTAAttctcaaaagaaaaatcaaagacCACAGCCACCACTACCACAGCCGCAGCTGAATTACCAGAAAGTTCAGCTTCGGCCACGAGTTGTGGCTGTGGATTCCGATAATTCATCGGAAAGAGAAGCATTATCGCCGGTGTCAAGTGACAGTTTACCACCGCCGGAAAGTCGGGAGAGGAAGAGAGCGAAGGTGATGAATTTGAATGCTGCGAAAGGAACAGAAGGAAGAAAGAAGGGTTGGGGAAGTGCTGTGAGGGAATTGACTCAAGCAATTGTGAAATTTGGAGAGGCTTATGAACAAGCGGAGACATCGAAGTTGCAGCAGATGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAAGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACACAGGTAGAGATTTCACAGCTTAAGcttggaagaaaaaatgttaatgttaatggCATTGAAGATCGCTTAACACAATCCAAGATCATCTACTTTCATTCTTTCTCTTTGCATTGGATCGTTTCAcattcaaaaatTTTTGTTGATTATGATTGCTTTTGTTCAAAAAGGATGGCGAAACTTGAAATGATCTGA 1188 0.4436 MDDDDEIHSNPSPLSGSPVSSPGAIGRVSVTVAAPAPESHPAMNSYALALPIQNQVRGNNGGGREDCWSEGATAVLIEAWGERYMELSRGNLKQKHWKEVAEIVNGREDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGSGITSSKWPFYDRLDQLIGPTAKITGSTSAGNSNLPPQRVPIGIPVGLRTGGGANQFNSQKKNQRPQPPLPQPQLNYQKVQLRPRVVAVDSDNSSEREALSPVSSDSLPPPESRERKRAKVMNLNAAKGTEGRKKGWGSAVRELTQAIVKFGEAYEQAETSKLQQMVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKNVNVNGIEDRLTQSKIIYFHSFSLHWIVSHSKIFVDYDCFCSKRMAKLEMI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00710 395 MobiDBLite consensus disorder prediction 166 258 - -
Tsu08g00710 395 MobiDBLite consensus disorder prediction 1 24 - -
Tsu08g00710 395 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 340 - -
Tsu08g00710 395 Pfam Myb/SANT-like DNA-binding domain 65 158 IPR044822 -
Tsu08g00710 395 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 340 IPR044823 -
Tsu08g00710 395 Gene3D - 68 133 - -
Tsu08g00710 395 MobiDBLite consensus disorder prediction 10 24 - -
Tsu08g00710 395 MobiDBLite consensus disorder prediction 235 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00710 Tsu-Chr8 7569398 7575699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00710 1 340 Trihelix Transcription Factor Family AT3G14180 46.556 2.91e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu08g00710 Myb_DNA-bind_4 1.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00710 - - cam:101508093 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00710 08 7569398 7575699 Tsu08g00710 08 7569398 7575699 ECH