Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00701 ATGTCTTCCTTCACTACTAATCCAAAGACGGAGAGTTACGATGTGTACTTGAGTTTCTGCGATGAAGACGCCGGTTCTTTTGCTATGGATATCTATAAGGCTCTTAGTTCCGAAGATGGAATCGTTGTCTTCTGTGACGATGAGAGGCTTGGAAATGGAGATCGAGAAATACTAACCTCGTCTCTGAATGTAATTGGAGAGTGCAAAATTGCTATAATCatattttcaagaaaatatgttaATTCAATATACTGTCTTCAAGAATTGGAGAAAATAACCGAGTGTTGCCAAACCACAGCTGGTCTCATTGTTCTGCCTGTGCTCTATGATGGCCTCCATCCGTCATCCGGAAGTATCTTTGGGGAAGCTTTTCATGATTTTCTGGATAGAATCTCAATGGTGGAAACCTCTAAAGTGGAAGATAAGTTCATGACTTGGGTGGCAGCGATCAGTAATAAAGCTTTCCAATATTCAGGATCAAGTGATTTAGTACACAGGGTTGAAAGTGAATACATTAAGAATGTAGTTGAACATGTTACTCGTGCGATAAACAAGAGAGATTTCTCCCGTGATTTCTATACAGCGAGTGTAAAATCTAGCGCGCAAGATGTGATTCAAATATTGAAACAATCAAAATCTCCTTTCCTATTAGGGATATGGGGGATGCCAGGGATCGGTAAATCTACCATTGCTCAAGCTATTTATGATCAAATTGGTCCCTATTTTGAGCACAAGTGCTTGCTCAAAAACATGGAAGAAAATGATAAAGTTTCATTACAACGGAAACTTCCTTTTCATATCCACAAACTAACCGAAATAGAGAAACCTACAATTGGATCGGTaagtgagattttaaaagaaaaacttcAACATAAAAGGGTACTTCTTGTACTTGACAATGTTGATAAATTGGAGCACCTAAAGGCTTTGTGTGGAAATCAGGATTGGTTTGGTTCAGGTAGCAAAATAATCATCACGACAAGAGATAGGCATCTACTCAAGGAGCATGGAGTTGACCATATATATCCAGTGAATGAACTGGACAAAAATGAATCACTTGAGCTTTTTAATTGGGGTGTATTCAGCGAAGCAACAACTCCTCCCGAAGATTTTGTTGAACTTTCTAGACAGATGGTTGCTTATTCTAGGGGATTGCCTCTTGCTCTTACAGCCCTTGGGAGGTTTTTGCGTCAAAAAGACATACTTCAGTGGAAAGGCGTGTTAAGTAGTCTGAAAAGATTTTCCTTTCCAGATCAAGAGGTACTAGAAGCTCTAAAAATGGGTTTTGATGCTTTGAGTGATGAAGAGAAACAAATCTTCCTAGATATAGCATGTTTCTTTAACGGGATGGACAAAAATAATGTACTCCATAGATTAAACAAGTCAACACAATCCACAACTCTTCATATAAGTCTCCTTGAAGACAAGAGCCTTTTAACCATTGATGAGAATGACAAGATTCAAGTGCATGTTCTGTTACAAGCCATGGCAAGATATATTATTAAGAGGGAATCAAGTAATAAGACTGATCAGCCGAAGATGTATGATGTGTTTTTGAGTTTCAGAGGGAAAGATACTCGTGCAAAGTTCGTGTCACATCTCTATGCCTCTCTTAAAAATGCTGCGATTTATACTTTCAGAGACGATGACGAGATTCAACGAGGAGACCGGATCTCATTCTCACTGTTGCGAGCAATTGGACAATCAAGAATTTGTATAGTTGTATTGTCTGAAAATTATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATCTTGGAAGTTGGCAGAACCAGGGGTCTGGTGGTAGTACCTGTGTTTTATGAGATAGCTTCCTCAGAAGTACAACATCAGAAAGGTCAATTTGGTAAAGCTTTTGAAGATCTTATATCAACAATCTCAGTGGATGAATCCACTAAAAGTAATTGGAGAAGAGAGCTCCTTGATATTAGTGGCAAAGCAGGGTTTTCACTAAGAGATTCCagGAATGAAAGTGCTGATATCAAGAATATTGTTGAACATGTCACCCACTTGCTAGATAGGACAGAGTTAATTGTTGCTGAACATCCAGTGGGTGTAGAATCCCGTGTGGAAGCGGCGATTAAGCGACTAAACATCCAAAAATCAGAAGATGTTTTAATTCTAGGGATATGGGGAATGAGGGGTACAGGTAAAACAACCATTGCCAAAGCCGTTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCGTTTTGAATATAAGGGAATTTTGGGAGACAGGTACTAATCGTGTTTCCCTACAGCAACAGGTGCTTTGTGATGTTTATAAAACAACAACATTCAAgatatctgaaatcgaaacagGAAAATGTATGTTGAAACAAAGTCTTGAACACAATAGGGTACTTTTAGTGCTTGATGATGTGAATGAATTGGACCAACTAAAGGCTTTGTGTGGAAGCCGCAAATGGTTTGGTCCGGGGAGTAGAATAATTATCACAACAATAGACAAGGATCTTCTTAGACTGGGTGAAGTTGATGAAGTGTATCCGATAGAAACAATGGACGAATGTGAAGCTCTTGAGCTTTTTAGCTGGCATGCATTCAAGCAACCAAGTCCCACTGAAGATTTTGCTGCACATTCAAAAGATGTGATTGCTTATTCTGGGAGATTGCCACTAGCACTTGAAGTCCTTGGGTCCTATTTGTCTAACTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTACAGAAGAAGCTAAGAGTAAGCTACAATGGTTTAAAAGATGTTACAGAGCAACAAATATTTCTTGATGTAGCTTGTTTCTTTATTGGGATGGACCGAAATGAtacaatcaaaattttaaatgggTGTGGATTTTTTGCTGATACTGGAATGAGAGTCCTTGAACAGCGAAGCCTTTTAACTGTTGACAATAGGAACAAGCTCAGAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAGTTTATGAGTATTCACCATTTGATCCTGAGAATCGCAGTAGGTTGTGGCGCCATGAAGAAGTGTTTGATATATTATCAAATCATAAGGGAACAGAAGCTGTCAAGGGACTGTCTTTGGAATTTCCAAGAAAAAATACTGTTTGCCTGAATACCAAAgcatttaagaaaatgaaaaaactcAGACTGCTTCAACTTTCCGGTGTGCAGCTTAATggagattttaaatatctttcaGCAGATCTTAAATGGCTGTACTGGCATGGATTTCCAATGACTTGCACTCCTGCAGAATTTCAGCAACGAAGTTTAGTGGCTCTCAAATTAAAACACACCAATCTCAAACAAATATGGACAAAGAGCGAGATGCTAGGTAATCTAAAAATTCTTAATCTTAGCCATTCTCTGGATTTGACTGAAACCCCAAACTTTTCCTACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGTTTGTCGACGGTCTCCCATAGCATTGGATCTCTGCATAAACTTCTTATGATAAATTTGACAGCCTGCACAGGTCTTCGAGAACTTCCGAGAAGCATCTATAAATTAAAGTCTCTAGAAACATTGATTCTTTCAGGATGCTCCAAGATTGACAAATTGGAGGAGGACTTGGAGCAGATGAAATCCTTGATAACCTTGAATGCGGATAAGATTGATATAAGAAAAGTGCCCTTTTCAATAGTCAAGTTGAAAAACATTggatatatttattttcatggCTTAGAAGGATTTCCACGCGATGTATTCCCTTCTCTCATTCGGTCTTGGATGTCACCATCAAATAATGTGATATCCCTAGCTCAAAAATCTGCGCCCATGTCATCTCTTGTTACTTTGAAGGACCTTCTAATGCTTCGAAGTCTTAATGTGGAGTGTGGCTCACATCTACAACTAATTAAAGTTGTAGCAAGAATTTTGGTTGTGTTAAAAGATACAAACTGTCAGAACTTTGAAGAAAGTGCAAGTGCAACTACAACACAGATCTCTAATATGTATACTTCTCCTTTAATTGATGATTGCCTTGGTCAAGTTTGCACTTCAGGGTCAAGTAATTACTTGAAATCTCTCTTAATTCAAATGGGAATGAAATTCCAAGTCCCCAATATTGCCGAAGATAGCATTTTACAGGGTTTCATTGTTGAGAAAACTACAGTATCTCTCTTATATAATGAACCACTCAGCAAAGAAATGGAACGCTGTCATGTAGTAGACGAGGAAGATTTTTCTGGTGGTGATAATGTGAATGTGCCGGTGGATAACAATGTTACCTATTCCAGTCAAGATGAAAATATAAGTGACGATAAGCACCGGCATGAAGGGGATGAGAATGCTAGTGGTTCTGGTGATGATGCCGTGGAATCAAATAAGAATTATGCTGTTTCTGGTGGCAGTGATATGCCAACAGATAAGAAGGTTATCATTTCTAGTGAAGATGAAAATGTGAGAGATAATAAGAACTGCGATGCAGTAGAAAAGGATGTTGTTCCAGCTGGAGATAAAAATAGATTTCGTGGACTCTTCACCAAACTTCCTTCCCTTGTCCGTGCTGTTCTGATGTCGCGGCCTTTCTGGTACGGTCTGGTTGTCATTCTGGTTTGGACCACTTGCCGCCATTTTAAGAAGAGAAGAAGTCCAAACCTTCTTACCAGGTATATACGAAGAGGTAAATGGCTAGTGGATCGCGCACAAAAGCTTATTACTTACAAGAAGGCCAATGAAACCCGCAGTCGCAGGCAGTTGCAGAGTTAA 4788 0.3803 MSSFTTNPKTESYDVYLSFCDEDAGSFAMDIYKALSSEDGIVVFCDDERLGNGDREILTSSLNVIGECKIAIIIFSRKYVNSIYCLQELEKITECCQTTAGLIVLPVLYDGLHPSSGSIFGEAFHDFLDRISMVETSKVEDKFMTWVAAISNKAFQYSGSSDLVHRVESEYIKNVVEHVTRAINKRDFSRDFYTASVKSSAQDVIQILKQSKSPFLLGIWGMPGIGKSTIAQAIYDQIGPYFEHKCLLKNMEENDKVSLQRKLPFHIHKLTEIEKPTIGSVSEILKEKLQHKRVLLVLDNVDKLEHLKALCGNQDWFGSGSKIIITTRDRHLLKEHGVDHIYPVNELDKNESLELFNWGVFSEATTPPEDFVELSRQMVAYSRGLPLALTALGRFLRQKDILQWKGVLSSLKRFSFPDQEVLEALKMGFDALSDEEKQIFLDIACFFNGMDKNNVLHRLNKSTQSTTLHISLLEDKSLLTIDENDKIQVHVLLQAMARYIIKRESSNKTDQPKMYDVFLSFRGKDTRAKFVSHLYASLKNAAIYTFRDDDEIQRGDRISFSLLRAIGQSRICIVVLSENYANSRWCMLELEKILEVGRTRGLVVVPVFYEIASSEVQHQKGQFGKAFEDLISTISVDESTKSNWRRELLDISGKAGFSLRDSRNESADIKNIVEHVTHLLDRTELIVAEHPVGVESRVEAAIKRLNIQKSEDVLILGIWGMRGTGKTTIAKAVYNQIGSKFEGRSFVLNIREFWETGTNRVSLQQQVLCDVYKTTTFKISEIETGKCMLKQSLEHNRVLLVLDDVNELDQLKALCGSRKWFGPGSRIIITTIDKDLLRLGEVDEVYPIETMDECEALELFSWHAFKQPSPTEDFAAHSKDVIAYSGRLPLALEVLGSYLSNCEITEWQKVLEKLKCIPHDQVQKKLRVSYNGLKDVTEQQIFLDVACFFIGMDRNDTIKILNGCGFFADTGMRVLEQRSLLTVDNRNKLRMHDLLRDMGRQIVYEYSPFDPENRSRLWRHEEVFDILSNHKGTEAVKGLSLEFPRKNTVCLNTKAFKKMKKLRLLQLSGVQLNGDFKYLSADLKWLYWHGFPMTCTPAEFQQRSLVALKLKHTNLKQIWTKSEMLGNLKILNLSHSLDLTETPNFSYLPNLEKLVLKDCPSLSTVSHSIGSLHKLLMINLTACTGLRELPRSIYKLKSLETLILSGCSKIDKLEEDLEQMKSLITLNADKIDIRKVPFSIVKLKNIGYIYFHGLEGFPRDVFPSLIRSWMSPSNNVISLAQKSAPMSSLVTLKDLLMLRSLNVECGSHLQLIKVVARILVVLKDTNCQNFEESASATTTQISNMYTSPLIDDCLGQVCTSGSSNYLKSLLIQMGMKFQVPNIAEDSILQGFIVEKTTVSLLYNEPLSKEMERCHVVDEEDFSGGDNVNVPVDNNVTYSSQDENISDDKHRHEGDENASGSGDDAVESNKNYAVSGGSDMPTDKKVIISSEDENVRDNKNCDAVEKDVVPAGDKNRFRGLFTKLPSLVRAVLMSRPFWYGLVVILVWTTCRHFKKRRSPNLLTRYIRRGKWLVDRAQKLITYKKANETRSRRQLQS 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00701 1595 SMART AAA_5 213 347 IPR003593 -
Tsu08g00701 1595 SMART AAA_5 712 852 IPR003593 -
Tsu08g00701 1595 Gene3D - 181 340 IPR027417 -
Tsu08g00701 1595 SMART till_3 514 654 IPR000157 GO:0007165
Tsu08g00701 1595 SMART till_3 12 153 IPR000157 GO:0007165
Tsu08g00701 1595 Gene3D - 509 687 IPR035897 -
Tsu08g00701 1595 MobiDBLite consensus disorder prediction 1461 1475 - -
Tsu08g00701 1595 PRINTS Disease resistance protein signature 885 899 - -
Tsu08g00701 1595 PRINTS Disease resistance protein signature 792 806 - -
Tsu08g00701 1595 PRINTS Disease resistance protein signature 1194 1210 - -
Tsu08g00701 1595 PRINTS Disease resistance protein signature 715 730 - -
Tsu08g00701 1595 Gene3D - 688 843 IPR027417 -
Tsu08g00701 1595 SUPERFAMILY "Winged helix" DNA-binding domain 420 505 IPR036390 -
Tsu08g00701 1595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 677 944 IPR027417 -
Tsu08g00701 1595 Pfam TIR domain 13 185 IPR000157 GO:0007165
Tsu08g00701 1595 Pfam TIR domain 515 677 IPR000157 GO:0007165
Tsu08g00701 1595 SUPERFAMILY L domain-like 1041 1325 - -
Tsu08g00701 1595 SUPERFAMILY "Winged helix" DNA-binding domain 921 1027 IPR036390 -
Tsu08g00701 1595 Gene3D - 850 941 IPR042197 -
Tsu08g00701 1595 MobiDBLite consensus disorder prediction 1421 1483 - -
Tsu08g00701 1595 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 138 IPR035897 -
Tsu08g00701 1595 Gene3D Ribonuclease Inhibitor 1036 1276 IPR032675 -
Tsu08g00701 1595 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 507 IPR044974 GO:0006952
Tsu08g00701 1595 Gene3D - 346 433 IPR042197 -
Tsu08g00701 1595 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 24 507 - -
Tsu08g00701 1595 SUPERFAMILY Toll/Interleukin receptor TIR domain 506 649 IPR035897 -
Tsu08g00701 1595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 443 IPR027417 -
Tsu08g00701 1595 ProSiteProfiles TIR domain profile. 513 676 IPR000157 GO:0007165
Tsu08g00701 1595 Pfam NB-ARC domain 695 932 IPR002182 GO:0043531
Tsu08g00701 1595 Pfam NB-ARC domain 201 416 IPR002182 GO:0043531
Tsu08g00701 1595 Gene3D - 6 180 IPR035897 -
Tsu08g00701 1595 Coils Coil 1210 1230 - -
Tsu08g00701 1595 ProSiteProfiles TIR domain profile. 11 151 IPR000157 GO:0007165
Tsu08g00701 1595 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 523 1422 - -
Tsu08g00701 1595 MobiDBLite consensus disorder prediction 1427 1441 - -
Tsu08g00701 1595 MobiDBLite consensus disorder prediction 1442 1458 - -
Tsu08g00701 1595 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 523 1422 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00701 Tsu-Chr8 7493154 7503423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00701 62 517 WRKY Transcription Factor Family AT4G12020 29.185 2.28e-40 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00701 - - cam:101511908 1971.82