Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00687 ATGGCCATAGTAGCTTCTGAAATTTTTCATCCAAAATTCTTCATCTTgattttcaacatcatcataaatttttCTATGACATGTTCAATGTCAGAAGCAGAAGCATTATTGAGCCTAAAAaactcattttcaaattcagAAGCACTTGATAATTGGATTGCCAACACTTTTCCTTGTACCGAAGACGATCAATGGGCAGGCGTTGTTTGTGTCAACGGTTTAGTAACCGGTTTGCGCCTCCGTGGAATGGGACTATTTGGAAAAATTGATGTTGATGCATTGGTTGAACTTAAAGGTTTAAGAACTATTAATCTTATGAACAATTCTTTCACCGGTTCGATTCCAGAATTGAATCGAATCGGTTTCTTGAAAGCGATGTATTTATCGGGAAACAAATTTTCGGGAAATATTCCTCGAGAATATTTCCAAAGAATGAAATCATTGAAGAAAGTTTGGTTATCAAATAATGAATTCACAGGTGTTATTCCATCATCATTAGCTGAGATTCCTCAACTTGTTGAATTACATCTTGAAAATAATCAATTTAGTGGTAACATTCCAAATTTCAACAATCCTTCATTGATGAAAATTGATGTTTCAAACAATAATTTAGAAGGTGAAGTACCTGAAGGTTTGCTGAGATTTAATCAAAGTTCTTTTCAAGGGAATTCGGGTTTATGCGGCACGAAAATCGGTACAATATGTGGAAAACCAATGGAACAAACAAACCCTATTGGAGCACataatatgaataatatgaCAGAACTTaagaacaataataataatgtttttgtGAATGTGGCTGATAAAAGTAAGCATAAGTCATTGCAGATTATTGGTATTGTTATAACAAGTTTAGTACTAATTTCACTtgcaatatttttgtttatgaaatcaaggaaaataaaagaaaaagttaaatatgATGATGAAATTGGTGTGAATAATAATAGACAAGGAAGTAGTAATGATATTAGAAGTGTTGAAGTTCAAGtaagtagtagtagtaatagtattagtaataGTACTAATACAGTGAAAAAAGATATGAATGCAGTGAAAAAAACACCATCATCTAGTAGAAGACATTCTTCTCATGGTAGTAAAGGAGGAATGGGAGAGCTtatgatgatgaatgatgagaagggtgtgtttggtttaCCTGATTTAATGAAAGCTTCTGCAGAAGTACTTGGAAATGGAGGGCTTGGATCATCTTATAAAGCTGTTATGTCTAATGGTTTTTCTGTGGTTGTGAAAAGAACTAGAGAGTTGAATGGTTTAGGAAAAGATGGTTTTGAAGCTGAGATGAAAAGACTTGGAAGGGTTAAACATTATAATGTTTTGACTCCTTTGGCTTATCATTATAGAAAAGATGAGAAATTAGTCATTACTGAGTATGTTCCAAGAGGAAGTCTTCTCTATTTGCTGCATGGTGATAGAGGACCATCACATGCAGAACTAGATTGGAACAAACGTTTAAAGATTGTACAAGGAATTGCAAAAGGAATGAATTATCTTCACAAAGAATTTGCTTCTTATGATCTACCACATGGAAACTTAAAATCAAGCAATATTCTACTTGGACCAGATTATGAACCACTTCTCATGGACTTTGGTTTCATCAATCTAGTCCCCCCTTCAAATTATGCACAAACATTATTTGGTTATAAAGCTCCAGAAGcattaaaaaacaacaaagtttCGCCTCGTTGTGACGTATACTGTCTTGGCGTAGTCATTCTCGAAATACTAACCGGAAAATTTCCTTCACAATATCTTAACACCGGTAAAGGCGGAACCGATATAGTACAATGGGTAGCATCAGCAATTTCTGAAGGAAGAGAAGTTGAATTACTTGATCCTGAAATTTCAAgtaataaaaaatcattaaatgaAATGCAACAACTTCTTCATATCGGTGCGGCTTGTACCGAAAGTAATCCTCAAAAGAGATTAGATATGTTTGAAGCAATTAGAAGAATAGAAGggattaaaacaaaaagtgtACATTTTGAAGAACAAGTTCAAGAATCAAGAACAATAGAGGTTTTACCATCTCTTACAGATGGTTTAGCAGATTCATCTCAAGCATATGATAATCAAGGACATTTTAGTGATGAATCAAGGAGAAGACATGGAAATAAAGATAATATTGAATTTGGT 2166 0.307 MAIVASEIFHPKFFILIFNIIINFSMTCSMSEAEALLSLKNSFSNSEALDNWIANTFPCTEDDQWAGVVCVNGLVTGLRLRGMGLFGKIDVDALVELKGLRTINLMNNSFTGSIPELNRIGFLKAMYLSGNKFSGNIPREYFQRMKSLKKVWLSNNEFTGVIPSSLAEIPQLVELHLENNQFSGNIPNFNNPSLMKIDVSNNNLEGEVPEGLLRFNQSSFQGNSGLCGTKIGTICGKPMEQTNPIGAHNMNNMTELKNNNNNVFVNVADKSKHKSLQIIGIVITSLVLISLAIFLFMKSRKIKEKVKYDDEIGVNNNRQGSSNDIRSVEVQVSSSSNSISNSTNTVKKDMNAVKKTPSSSRRHSSHGSKGGMGELMMMNDEKGVFGLPDLMKASAEVLGNGGLGSSYKAVMSNGFSVVVKRTRELNGLGKDGFEAEMKRLGRVKHYNVLTPLAYHYRKDEKLVITEYVPRGSLLYLLHGDRGPSHAELDWNKRLKIVQGIAKGMNYLHKEFASYDLPHGNLKSSNILLGPDYEPLLMDFGFINLVPPSNYAQTLFGYKAPEALKNNKVSPRCDVYCLGVVILEILTGKFPSQYLNTGKGGTDIVQWVASAISEGREVELLDPEISSNKKSLNEMQQLLHIGAACTESNPQKRLDMFEAIRRIEGIKTKSVHFEEQVQESRTIEVLPSLTDGLADSSQAYDNQGHFSDESRRRHGNKDNIEFG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00687 722 MobiDBLite consensus disorder prediction 313 373 - -
Tsu08g00687 722 MobiDBLite consensus disorder prediction 314 353 - -
Tsu08g00687 722 Gene3D Transferase(Phosphotransferase) domain 1 468 686 - -
Tsu08g00687 722 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Tsu08g00687 722 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 670 - -
Tsu08g00687 722 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 670 - -
Tsu08g00687 722 SUPERFAMILY L domain-like 27 215 - -
Tsu08g00687 722 ProSiteProfiles Protein kinase domain profile. 392 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00687 722 Gene3D Phosphorylase Kinase; domain 1 391 467 - -
Tsu08g00687 722 Pfam Protein kinase domain 396 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00687 722 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Tsu08g00687 722 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tsu08g00687 722 MobiDBLite consensus disorder prediction 693 722 - -
Tsu08g00687 722 SUPERFAMILY Protein kinase-like (PK-like) 396 662 IPR011009 -
Tsu08g00687 722 MobiDBLite consensus disorder prediction 704 722 - -
Tsu08g00687 722 Gene3D Ribonuclease Inhibitor 193 229 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00687 Tsu-Chr8 7391657 7394691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00687 20 665 Receptor kinase-like Gene Family AT3G42880 46.677 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu08g00687 Pkinase 3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00687 - - mtr:MTR_8g021350 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00687 08 7391657 7394691 Tsu08g00687 08 7391657 7394691 ECH