Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00686 ATGTCCTCACCGGAAAATCTCCCATTAGAAACCGCTCAAAAAATCATTCTCCGATGGGACTCAACCGCTTCCGAAGAAGCTCGTGAAAAAATGATCTTCGATCAAACCACAACAAATCGTGAAGAAATCGATCTTTATCTCCAAGCCGTTGATGAAATCCAACGCTCCATATCCTCCACCTCTCTCTCCGACGACCACCACACCAAACCTACCTCCACCATCCAGATCGCCATGGCTCGTTTAGAAGACGAGTTTCGTAACATCTTAATCTCTCATACAAATCCAATCGATCCTTCTTTAGATGAAGATTCTTCGTTTTCTTCAAAACGACTTAACGAAGATGAAGTTAGTTACAGCGgcgataatgatgatgaagatgaggaTAAGCTTCTTCGTTTTGATTCTACTTGTTCTGTTGCTACTACAGCTTCAAGTTACCGATCAACTAGTAGCATCCGTGAGATCGATCTGATACCGGCGGAAGCAGTTTCCGATCTCCGGTGTATCGCTGATAGAATGATTTCATCTGGTTATCTTCGTGAATGTATTCAAGTTTATGGAAGTGTGAGAAAATCTGCTGTTGATTCGAGTTTTAAGAAACTCGGTGTTGAGAAATTGAGTATTGGTGATGTTCAGAGATTGGATTGGGAACAGTTAGAAACGAAGATTCGGAGATGGATTCGAGCGGCGAAAGTTTGTGTTCGAACACTTTTTGCGAGTGAGAAGAGATTATGTGAACAGATTTTTGATGGAATTGGTACTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCAATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGTCGTAGATCGCctgaaaaattatttaagaTACTTGATCTTCATGATGCTTTAATGGATTTGATTCCTGATATTGATGCTGTTTTTGATTCTAAGTCGTCTGAATCGATTAGGGTTCAGGCGGCTGAGATTTTGTCGCGTTTAGCGGAAGCTGCTAGAGGGATTTTATCTGAATTTGAAAATGCTGTTCTTAAGGAGCCTTCTAAGGTTCCTGTTCCTGGCGGAACGATTCATCCTTTGACTAGGTATGTTATGAATTATATAAGCTTGATTTCTGATTATAAGCAGACTTTGTATGAGCTTATAGTTTCGAAGCCTTCGAATGGTTCGAGGTTTTCGGGTGATCCTTTGAGTCCTGATATGGATTTCGATGAGGTTGAAGAGAAACCGCCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTTAATTTGGATGGTAAGTCAAAGCATTATAAAGATGCTTCTTTGTTGCATTTGTTTATAATGAACAATGTTCATTATATTGTTCAGAAGGTTAGAGGGTCGCCCGAGTTGAGGGAAATGATCGGGGATGATTATTTGAAGAAGTTGACTGGGAAATTTCGACAAGCTGCTACTAGCTATCAGAGAGCAACTTGGGTTAGGGTTTTGTATTGTTTGAGAGATGAAGGGTTACATGTGAGTGGTGGATTTTCTTCTGGTGTGTCGAAGAGTGCTTTGAGGGAAAGGTTTAAGGCTTTTAATGCTATGTTTGAAGAGGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAACTTAGAGAGGAGCTTCGGATTTCTATATCGGAGAAGCTGATTCCCGCGTATAGGTCGTTCCTTGGACGGTTCAGGAGCCATATCGAGAGTGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAGGATTTGGAGGACgctgttttggattttttcgaAGGGATTCCTGTTTCACAGCACACGAGAAGGAGATCTCAGTGA 1836 0.3938 MSSPENLPLETAQKIILRWDSTASEEAREKMIFDQTTTNREEIDLYLQAVDEIQRSISSTSLSDDHHTKPTSTIQIAMARLEDEFRNILISHTNPIDPSLDEDSSFSSKRLNEDEVSYSGDNDDEDEDKLLRFDSTCSVATTASSYRSTSSIREIDLIPAEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDSSFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDAVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLYELIVSKPSNGSRFSGDPLSPDMDFDEVEEKPPLAIHLIWIIVILQFNLDGKSKHYKDASLLHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00686 611 MobiDBLite consensus disorder prediction 103 117 - -
Tsu08g00686 611 Pfam Exo70 exocyst complex subunit 225 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu08g00686 611 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 611 - -
Tsu08g00686 611 MobiDBLite consensus disorder prediction 99 126 - -
Tsu08g00686 611 SUPERFAMILY Cullin repeat-like 40 598 IPR016159 -
Tsu08g00686 611 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 611 IPR004140 GO:0000145|GO:0006887
Tsu08g00686 611 Gene3D Exocyst complex component Exo70 15 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00686 Tsu-Chr8 7377839 7380516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00686 9 611 EXO70 exocyst subunit family AT1G72470 70.370 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00686 K07195 - gmx:100808671 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00686 08 7377839 7380516 Tsu08g00686 08 7377839 7380516 ECH