Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00681 ATGGAAAACTTACCCAAATCATCACCTCCAAGTATATTGCAGAGTGAGAATTTGACCAAGTATATACTGGAAAGCAACGTTTATCCACGAGAACATGAGACTCTCAAAGAGATAAGAAATGTCACTGCAAGCTATCCTATGGGTTTCATGGGTACTGCACCTGATGCTGGTCAGCTAATGGCCATACTCTTGAAGTTATTGAATGCTAAGAAGACAATTGAAGTCGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTTACCATTCCTCATGATGGAAAGATTATAGCTATGGATCCAGACAGAAAAGCTTATGAAGTAGGACTTCCATCAATTAAAAAAGCTGGTGTAGAACACAAGATTGACTACATAGAGTCTCAAGCTTTACCTGTTCTTGATAAACTCTTAGAAAATCCTTCAAATGATGGAAATTTCGACTTTGCTTATGTTGATGCTGATAAAGGAAATTATTGGAATTATCACGAGAGGCTTATTAAACTGATTAAGATTGGTGGATTAATTATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATTGCCTGAAGAACTTGTTCCAGGTCCTAAGAGAAAAATAAGACAAGAAGCACTTGCTTTCAACAAAGCAATTTCAAGTGATTCTCGTGTTGAAATTTCGCTTGTTTCAATCGGTGACGGCTTCACTATTTGTAGGCGTACTCATTGA 708 0.3785 MENLPKSSPPSILQSENLTKYILESNVYPREHETLKEIRNVTASYPMGFMGTAPDAGQLMAILLKLLNAKKTIEVGVFTGYSLLLTALTIPHDGKIIAMDPDRKAYEVGLPSIKKAGVEHKIDYIESQALPVLDKLLENPSNDGNFDFAYVDADKGNYWNYHERLIKLIKIGGLIIYDNTLWGGTVALPEELVPGPKRKIRQEALAFNKAISSDSRVEISLVSIGDGFTICRRTH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00681 235 Gene3D Vaccinia Virus protein VP39 5 234 IPR029063 -
Tsu08g00681 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Tsu08g00681 235 Pfam O-methyltransferase 28 233 IPR002935 GO:0008171
Tsu08g00681 235 CDD AdoMet_MTases 73 177 - -
Tsu08g00681 235 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 6 234 - -
Tsu08g00681 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 11 234 IPR002935 GO:0008171
Tsu08g00681 235 PANTHER O-METHYLTRANSFERASE-RELATED 6 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00681 Tsu-Chr8 7312699 7315935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00681 4 235 Monolignol Biosynthesis Gene Families AT4G26220 62.931 5.24e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00681 K00588 - gmx:100780516 376.326