LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g00666	ATGGCACCAGTACAATTATTGGAGCTTCCTAGTTGGCTCACATTGTTGACAACATTTGCAATTCTCCTCCTCCTCAGCCGCAGTCTCCGCCGCCGCAAATACAATCTACCACCAGGCCCAAAACCATGGCCCATAATAGGAAATCTCAACCTTATGGGATCCCTCCCACACCAATCCCTCCATGGGCTCACCCAAAAATATGGACCCATCATGCATGTATGGTTCGGCTCCAAACCCGTCATTGTGGGCTCGTCTGCAAAAATAGCCAAAGAATTTCTCAAAACTCATGATGCCACTCTTGCCGGTCGGCCTAGGTTCTCTGCAGGAAAATACACAACTTATAACTACTCTGACATAACTTGGTCCCAATATGGTCCATATTGGCGTCAAGCACGTAGAATGTGTCTATTGGAATTGTTTAGTGCGAGACGCCTTCAATCTTATGAGTACATAAGAAACCAAGAGTCACATGGTTTTTTGTGCGAACTCTtcaactcaaaaaataaaataattttgttgaaaGACCATCTTTTAAATTTGAATCTAAATATTATAAGTCGCATGGTGttgggaaaaaaatatttggaaaaGACTGAAAATGCTTTTATTTCCCCTGATGAGTTTAAGAAGATGTTGGAAGAGTTGTTTTTGCTTAACGGGGTCCTTAATATTGGAGATTTTATTCCTTGGATTAATTTCATGGATTTACAAGGTTATGTGAAGAGGATGAAGGCTTTGGGTAAAAAATTTGATAGGTTTATGGAACATGTGTTGGAGGAACacattgaaagaagaaaaaatgctAAGGATTATGTTGCTAAAGATATGGTGGATGTACTTTTGCAGCTTGCTGAAGATCCTAATCTTGAAGTCAAACTTGAGAGGCCTGGAGTCAAAGGCTTTACTCAGGACTTAATAGCAGGTGGAACAGAGAGCTCAACAGTAATAATAGAATGGGCAATGTCAGAGCTAATGAAAAAGCCAGAGATATTCAAAATAGCAACAGAGGAACTAGACAGAGTAATAGGAAAAAATAGATGGGTTGAAGAGGAAGACATTGCCAATTTACCATACATTTGTGCAATTGCTAAAGAAACAATGAGGCTACATCCAGTGGCACCATTGTTAGTGCCAAGAGAAGTTAGAGAGGATTGCAATGTTGATGGTTATGATATCCCAAAAGGGACTTTAATTTTTGTCAATATTTGGGCAATTGGAAGAGATTCTAATAGTTGGGAGAATCCATATGAGTTTGCACCAGAAAGATTTCTTGGTAAAGATATAGATGTAAAAGGACATGATTATGAGTTGTTGCCATTTGGTGCTGGTAGAAGAATGTGTCCGGGTTACCCTCTTGGTATTAAGGTGATTCAATCAGGTTTAGCTAATTTGTTGCATGGATTTAATTGGAGATTAAGTGATAATAATGTGAAAAATGAGGATTTGAATATGGATGAGATTTTTGGGTTATCTACACCTAAGAAAATACCATTAGAAGTTGTCGTGGAGCCTAGACTTGCTGATCATCTTTACTCCCTTTGA	1542	0.3768	MAPVQLLELPSWLTLLTTFAILLLLSRSLRRRKYNLPPGPKPWPIIGNLNLMGSLPHQSLHGLTQKYGPIMHVWFGSKPVIVGSSAKIAKEFLKTHDATLAGRPRFSAGKYTTYNYSDITWSQYGPYWRQARRMCLLELFSARRLQSYEYIRNQESHGFLCELFNSKNKIILLKDHLLNLNLNIISRMVLGKKYLEKTENAFISPDEFKKMLEELFLLNGVLNIGDFIPWINFMDLQGYVKRMKALGKKFDRFMEHVLEEHIERRKNAKDYVAKDMVDVLLQLAEDPNLEVKLERPGVKGFTQDLIAGGTESSTVIIEWAMSELMKKPEIFKIATEELDRVIGKNRWVEEEDIANLPYICAIAKETMRLHPVAPLLVPREVREDCNVDGYDIPKGTLIFVNIWAIGRDSNSWENPYEFAPERFLGKDIDVKGHDYELLPFGAGRRMCPGYPLGIKVIQSGLANLLHGFNWRLSDNNVKNEDLNMDEIFGLSTPKKIPLEVVVEPRLADHLYSL	513

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tsu08g00666	513	SUPERFAMILY	Cytochrome P450	37	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	447	470	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	180	198	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	360	378	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	297	314	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	437	447	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	88	109	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	401	425	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	317	343	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu08g00666	513	PRINTS	E-class P450 group I signature	64	83	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g00666	Tsu-Chr8	7145806	7149561	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu08g00666	15	513	Cytochrome P450	AT5G07990	41.454	1.44e-137	405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g00666	K20623		-	ag:AAG44132	828.55

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu08g00666	08	7145806	7149561	Tsu08g00666	08	7145806	7149561	ECH

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