Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00665 atgtctCCAAAGAAAATTCAATGGAAAGCTTTTGTATTTGGTTGTTTCAAGGACAACAAACAACATCCTATTCCTACCTTGGAAACACcaaaatttgtttcaaaaaagaCAGGTTCAAGTAGAATTTCTCTATCTGATTTAAGTGATTATTCATCACCTTCTGTTATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCAAATTTTCACTTGTAAAGAACTCAAAGAGATTACAAACAATTTCaacaaatcaaattttcttGGAGAAGGTGGATTTGGAAAGGTATACAAAGGTTTTATTGATGATAAACTTAGGCCAGCACTTCTTGTTCCTCAAGCTGTAGCTGTTAAAGCCTTAAACTTGGATGGAAAACAAGGCCATAGAGAGTGGTtgGCTGAGGTAATCTTTTTGGGGCAGTTGAAGCATCGCAATCTTGTTAACTTAATTGGTTATTGTTATGAAGATGAACATAGACTTCTTGTGTATGAATACATGGAAAGAGGAAGTCTTGAAGAAAAACTTTTCAAAGGTTATTTAGCAACCTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGATTAGCTTTTCTTCATGAAGAAGAGAAACCAGTTATATATAGAGATGTTAAAGCCTCAAATATTCTATTGGATGCTGATTACAATGCTAAGCTTTCAGATTTTGGTTTAGCAATTGATGGACCAGATAAAGATCAAACACATATCACAACTCGTGTGATGGGTACACAAGGTTATGCTGCTCCTGAATATATCAATACAGgTCGTTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTTTTAGAGCTATTAACAGGAAAGAAATCAGTGGACAAAAAAAGACCAACAAGAGAACAAGATTTAGTAGAATGGGCAAGACCATTATTGAAAGATTCACACAAACTTGAAAGAATAATTGATTCAAGACTTGAAGATCAATATTCACTTGAAGGTGCTAGAAAATTAGCATGTTTAACTTATCAATGTCTAAGTCATCATGATAAAAGTAGACCAAGCATGAGAACGGTTGTTAAGACATTACAATCAATCAtgaaattaaatgacattccaATTGGTCATTTTGTTTATGTGGCTCCTAGTGAAGTAACAAATGTTGAAGTATCACTAAATGTGACTcacaaaaatgaagaagaaaatgtatGTGATGAGAATAAGAATGAGAATGTGATCAACAAAAGTGTTGTGAAAACTAAAGATGAAGAAAAGggagagaaaaatgaaaagggTCGCGAAATTCGTCGCAAAAGTCGTAGCACACGACGCCGAGTTAAGGCGTTGATGAGGTCTCGTTCGGTTTATTCTGACACTGCTTTGTATAAGACTCTTGGAACAAGTTTGTATTCACCTAAGCAAAGCAAGGAGAAGCAACAAGAAGTGGAAATTTGCCAATATTAG 1458 0.3244 MSPKKIQWKAFVFGCFKDNKQHPIPTLETPKFVSKKTGSSRISLSDLSDYSSPSVMSDLSNSLVGSNLQIFTCKELKEITNNFNKSNFLGEGGFGKVYKGFIDDKLRPALLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCYEDEHRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTQGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRPTREQDLVEWARPLLKDSHKLERIIDSRLEDQYSLEGARKLACLTYQCLSHHDKSRPSMRTVVKTLQSIMKLNDIPIGHFVYVAPSEVTNVEVSLNVTHKNEEENVCDENKNENVINKSVVKTKDEEKGEKNEKGREIRRKSRSTRRRVKALMRSRSVYSDTALYKTLGTSLYSPKQSKEKQQEVEICQY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00665 485 SUPERFAMILY Protein kinase-like (PK-like) 56 361 IPR011009 -
Tsu08g00665 485 Gene3D Phosphorylase Kinase; domain 1 49 166 - -
Tsu08g00665 485 MobiDBLite consensus disorder prediction 418 434 - -
Tsu08g00665 485 Gene3D Transferase(Phosphotransferase) domain 1 167 372 - -
Tsu08g00665 485 PANTHER BNAA02G16030D PROTEIN 32 421 - -
Tsu08g00665 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Tsu08g00665 485 ProSiteProfiles Protein kinase domain profile. 83 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00665 485 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Tsu08g00665 485 CDD STKc_IRAK 89 364 - -
Tsu08g00665 485 ProSitePatterns Protein kinases ATP-binding region signature. 89 119 IPR017441 GO:0005524
Tsu08g00665 485 PANTHER OS01G0588500 PROTEIN-RELATED 32 421 - -
Tsu08g00665 485 SMART serkin_6 83 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00665 485 MobiDBLite consensus disorder prediction 418 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00665 Tsu-Chr8 7133753 7136455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00665 69 390 Glycoside Hydrolase AT3G07070 48.171 6.23e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu08g00665 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00665 - - gmx:100790454 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02291 08 31986480 31989504 Tsu08g00665 08 7133753 7136455 ECH
Tsu08g00665 08 7133753 7136455 Tsu08g00665 08 7133753 7136455 ECH
Tsu08g00665 08 7133753 7136455 Tsu07g00762 07 6278843 6281460 ECH
Tsu08g00665 08 7133753 7136455 Tsu01g00589 01 5171694 5174030 ECH