Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00658 ATGGAACCAAATCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTTTTGGATGATCCATATAACAATGGTTACATCCAAGAGTATCCGTTATGGGATCAGAACCAAGATATAAACAACCAGTATCGAATTGATGTCAATACTAATTCCCCTAATGGCACCAACAACATTGTTGCTGCTAGTACTACCACTAGCACAACATCACTTGAGCCTAATAGTTCTAACAATATACCCTTTTCAGATTTACCGAAGAAACGCAATGCCGAGGATGAATCAGGTCTCAAAAAACAATCACACAGCCAAAAGAACAAGAGAATCAAGAGCCGTCCGGCAAATGAAGCTGATAATGGAGATGCAGCTATTGAAGGGACAGTGGTTAGAAAACCTGGTGGGAACAAGAAAGGTGCAGGTAAGGCTAATGGAAATAACAGTAGCAATGGAAACAACAAGGATGGTAGGTGGGCTGAGGAGTTGCTCAACCCTTGTGCTGCAGCCATAACTGGTGGAAACCTGAATCGCGTGCAACATCTCTTATATGTTCTTCATGAGCTAGCCTCAACTACTGGTGATGCTAACCACCGGCTTGCAGCGCATGGTCTCCGAGCACTGACACACCATCtgtcttcatcttcatcatctaccACATCAGGTACTATAACTTTTGCATCTACAGAACCGCGATTCTTCCAAAAGTCGTTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTCCTAGCTGAAGAGCCGAACAATTCACGTTCTCTTCACATCCTTGACATTGGAGTCTCTCATGGGGTGCAGTGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTGGTTCGCCTCACAGTGGTTACTGCTTCATCAACTGAAAATGACCAAAATATGGAAACCCCATTTTCAGTAGGTCCATGTGGTGATAACTTCTCTTCTAGACTCCTTGGTTATGCTCAGTCTATAAATGTCAATCTGCATATAAACAAGCTTGATAATCACCCGTTGCAGACGTTAAATGCTCAAAGTGTTGACATCTCCCCTGATGAAACTCTTATTGTCTGTGCTCAGTTCAGGTTGCACCACTTGAATCATAACACTCCCGATGAAAGAAGTGAGTTTCTGAAGGCGTTGAGAGACATGGAGCCCAAAGGGGTGATATTGAGTGAGAACAACATGGATTGTTGCTGCAGTAGTTGTGGTGATTTCGCCACTGGATTCTCTCGAAGAGTGGACTACCTATGGAGGTTTTTAGATTCAACTAGTTCCGCATTCAAAGGCCGTGAGAGTGATGAAAGGAGAATGATGGAAGGCGAGGCTGCAAAAGCATTGACAAATCAACGTGAGATGAACGAAGGGAAAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGATTTGCAGGTGAAGTATTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTAAGGAAGTATGATAATAATTGGGAGATGAAAGTAGAAGAAGAGAACAGTACAACTGTGGGACTATGGTGGAAGGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGATAAACATAGTTCAAGCTCAACATTGACAGCAAAGCTTTAA 1674 0.4259 MEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYPLWDQNQDINNQYRIDVNTNSPNGTNNIVAASTTTSTTSLEPNSSNNIPFSDLPKKRNAEDESGLKKQSHSQKNKRIKSRPANEADNGDAAIEGTVVRKPGGNKKGAGKANGNNSSNGNNKDGRWAEELLNPCAAAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTTSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRSLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDQNMETPFSVGPCGDNFSSRLLGYAQSINVNLHINKLDNHPLQTLNAQSVDISPDETLIVCAQFRLHHLNHNTPDERSEFLKALRDMEPKGVILSENNMDCCCSSCGDFATGFSRRVDYLWRFLDSTSSAFKGRESDERRMMEGEAAKALTNQREMNEGKEKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDNNWEMKVEEENSTTVGLWWKGQPVSFCSLWKLDKHSSSSTLTAKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00658 557 Pfam GRAS domain family 164 543 IPR005202 -
Tsu08g00658 557 MobiDBLite consensus disorder prediction 71 89 - -
Tsu08g00658 557 MobiDBLite consensus disorder prediction 145 159 - -
Tsu08g00658 557 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 2 543 IPR030015 -
Tsu08g00658 557 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 543 IPR005202 -
Tsu08g00658 557 MobiDBLite consensus disorder prediction 71 160 - -
Tsu08g00658 557 ProSiteProfiles GRAS family profile. 154 543 IPR005202 -
Tsu08g00658 557 MobiDBLite consensus disorder prediction 91 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00658 Tsu-Chr8 7068310 7069983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00658 3 543 GRAS Transcription Factor Family AT3G13840 51.184 3.01e-179 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu08g00658 GRAS 3.1e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00658 - - gmx:100806550 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00658 08 7068310 7069983 Tsu08g00658 08 7068310 7069983 ECH
Tsu08g00658 08 7068310 7069983 Tsu02g05315 02 61819848 61821265 PCT