Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00632 ATGGGTAGAATTAGTCCTAAAGAGATTAATAAAGGTGCTTGGTCTCGAGAAGAAGATGATATTCTTTCCAAATATGTTTCCATTCATGGAGAAGGAAAATGGCAAAAGGTTGCTCAAAATGCAGGTTTAAAGCGATGTGGAAAAAGTTGCAGACAAAGATGGTTGAATTATCTCAAGCCAGGTATAAAGAGAGGCGACATCTCTTCGGATGAAGATGATATGATCATAAGACTTCATCGTCTACTTGGCAATagATGGTCTTTGATAGCTAAGAGGCTACCGGGACGAACAGACAATGAAATCAAGAACTACTGGAATACGAATCTGTCAAAAAAGTTACAAAAACAACCTACATCGTCACCATTGCCATCATCATCTTCTGTTTCACTTCGACACAATCATCACAAATGTGGACATGTAGCACCAGAAACTCCAAGGCCTAGAAGATTGAAGATTGTTCATCAATACAACAAAAATTTGCAGAATATTAATGGAAGTGAGTGTGATCAAGGGAGTGATGAAACTTCTATTGCTGATTATCTCATTGACATTGATCATCAAGATCATTTAATGGTTGGTGATGATGAGTCTAACTCAAAGTTTCCAAAAATGGAAGATCATAAGAAGGTAGGTTCAACTAATAATAGTACTCATAGCTCATCATCACCTTCTCATCATTGTCATCTTTTAGAAGAGAAATTTGAACCTTTAGAGACCCTTTTGGATGTGGAGCTCAAGAAAATGGCTTCCTTTCTTGGACTTGAAAATGATTGA 774 0.3682 MGRISPKEINKGAWSREEDDILSKYVSIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISSDEDDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSPLPSSSSVSLRHNHHKCGHVAPETPRPRRLKIVHQYNKNLQNINGSECDQGSDETSIADYLIDIDHQDHLMVGDDESNSKFPKMEDHKKVGSTNNSTHSSSSPSHHCHLLEEKFEPLETLLDVELKKMASFLGLEND 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00632 257 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 2 252 - -
Tsu08g00632 257 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Tsu08g00632 257 Gene3D - 68 138 - -
Tsu08g00632 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Tsu08g00632 257 CDD SANT 68 109 IPR001005 -
Tsu08g00632 257 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Tsu08g00632 257 SMART sant 10 60 IPR001005 -
Tsu08g00632 257 SMART sant 63 111 IPR001005 -
Tsu08g00632 257 MobiDBLite consensus disorder prediction 194 212 - -
Tsu08g00632 257 PANTHER MYB TRANSCRIPTION FACTOR 2 252 - -
Tsu08g00632 257 MobiDBLite consensus disorder prediction 110 131 - -
Tsu08g00632 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 113 IPR017930 -
Tsu08g00632 257 Gene3D - 3 64 - -
Tsu08g00632 257 MobiDBLite consensus disorder prediction 194 226 - -
Tsu08g00632 257 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Tsu08g00632 257 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Tsu08g00632 257 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Tsu08g00632 257 CDD SANT 13 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00632 Tsu-Chr8 6856123 6857451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00632 8 128 MYB Transcription Factor Family AT5G40330 59.504 3.63e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu08g00632 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00632 K09422 - gmx:100101858 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00632 08 6856123 6857451 Tsu08g00632 08 6856123 6857451 ECH