Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g00615 | ATGATATCTTTGGTTATATTCTCTCAAAACTATACTACTTCAAAGTGGTGTTTGGATGAGTTAGTTAAAATTGTTGAATGTAGAGAGAAAAATGGACAGATTTTATTGCCTGTTTTCTACAAAGTGGACCCCACTGTTGTTAGGCATCAAAAAGGAACTTATGGAAAAGCATTTTTTGAACATGAAAAAAAGCATGGTTTGACCAAAGTGCAAACGTGGAGATCTGCTTTGAAGAAATCTTCTGATATCAGTGGCTTTCATTCCTCAACTTTTCTGGATGATGCTAAGCTTGTTGAAGAAATAGTTAAAAATGTGTTGAAGAGGTTGGATCATGGTCGTCTAGTTAATTCAAAAGGACTTGTTGGAATTGGAAAACAAATTTCACATGTGGAATCATTGTTACAAGTCGAGTCACAAGATGTTCATGCTATTGGAATTTGGGGGATGAATGGTATAGGTAAAACAACTATCGCAGAAGAAGTATATAGCAAGTTATGTTCTGAATATGACAGTTGTTACTTTAAAGCTGATATCAGAGAAGAATGTAGAAGACATGGAATAATGTATTTAAAGAAAGAGCTTTATTCTACTCTATTAAGGCAACAAGATTTGAATATTGACATACCACATGGATTGCCCTATTTTGTCGTGAGGATGCTTCATCGTATGAAGGTTCTTGTTGTTCTTGATGATGTCAATGATCTACAACAACTTGAAATCTTAATCGGATCAACACTTGATTGGTTTGGAAATGGTAGTAGAATAATCATAACAAGTGGAGACAAGCAAGTACTTGCCGAAAGAGGTGTTGATATATATGAGGTTAAGGCATTAGACTTTGATGACTCTCTTAGGCTTTTCACCATGTATGCCTTTGaacaaaatcatatatatcAAAAAGAGTACTATGAGTTGTCCAAGATGATGGTCAATTATGCCACAGGAATTCCATCTCTTCTTCAAGTTTTGGGTCGTCAGCTTCGTGGAAAAGATAAAAAAGTATGGGAAAACCAATTAGGGAGGATTAAAAAAAGAGTTCCGATTAAGAAAGTTCTTGAAATTTTTAGATTGAGTTACAATGATCTTGATCGACACGAGAAGAAGATACTTTTAGACATCGCATGTTTTTTTGATGGATTGCATCTCAAAGTTGACGACATACAACTGTTGGTAAAAGACCGTGATTATTCGTTGGGTGTTGAGTTGgaaagtttgaaaaataaagcTCTTATAACTATTTCTCCAGATAGTGTTGTATCCATGCACAACATTATACAAGAAGCAGCTTTGGAAATTGTTCGCGAAGAATCCATTGACAAGCTTGGAAAGCAAAGTGGACGTCTGGATCCTGATGATATTTATTATATACTGAAAAATAATAAGGGGAGTGCGGCTATTAGAAGCTTAGCTATCGATGTATCGACAATTAAAGAGCTGCAATTAAATCCAAAGGTGTTTGCAAAAATGAACAAACTACGATATTTGGATATTTATAGTAAGGGGTACTCTTATAATTTTCTCCGAAGCCGAGGTGACTTGTATCTTCCTCAAGGGCTTCAATCTTTGCCAAATGAACTCAGATACCTTCGTTGGGCACGTTTCCCTTTGGAGTCCTTACCATGTACTTTTTCTGGTGAAAAACTTGTTGTACTGGACTTGCAGTACAGCCGTGTGAAACAACTTTGGCGTGAAGATCATAAGGATCttgcaaatttaaaatatctgaAACTTGGTTCATCGTCACACCTGTTGGAGCTTCCAGACTTGTCAAATGCTAAAAATCTTGAAGTAATTGATCTTCGTCTATGTTCAGGGTTGACTAGTGTACATCCATCTGTCTTTACTCTCAATAAGCTTGAGAAATTGGACCTAGGTGGATGTTTTTCCCTCAGAAGCTTTCGAAGCAATATCCGTTTCAGCTCCCTTCGTTATCTCTCGCTTGCTGGTTGCACTGCACTAAAGGAGTTCTCAGTAACCTCAAAGGAAATGGTAAACTTGAATTTAGAACTAACAGGTATCAAACAACTACCATCATCaattggacttcaaaccaaacTTGAAAAGTTGCTTCTTGCACGCAGTTACATTAAGTACTTGCCTGAAAGCATCCAGCTTCTTACAAGGCTTAAACATCTAGACTTGCAACATTGTAGGAAGCTTCGAAGTCTACCGAAGCTTCCTACATCGTTGATAACTCTAAATGCAAGTGGCTGTGTATCATTGGAGAATGTAACTTTCCCTTCAACATTTGTTCAAATGTTAAAGGAAAACAAGACAAGGGTTGCATTCTGGAATTGCCTGAAACTCGATCAACATTCTCTCAAGGCAATAGGTTTGAATGCGCAAATTAACATTAAGAAATTTGCACATCAACATATATCCATATCTcatgatcatgatcatgatTATGATGCTCAAGGCACGTACGTGTATCCGGGAAGCAGTGTTCCAGAATGGTTGGTATATAGGACAACACATGATTACATGACTATTGATCTTTCTTTTGCTAACCATTCCTCTCAATTGGGCTTCATATTTTGCTTCATTGTTCCACCAGTTCCATCACAGGGTTTCATTTTGAGATTTAATATTAGTGTTGATGGAGGTGATGATAGTCAATTGCACTTGGATAGGCCAAGCCGAGAAATTAAATCAGATCATGTGTATTTAGTATCTGACCGAGGTTTTTCTCGCTATCTCAATGGCCGAGTCAAAGTTCAGCCAAGGTTCAAACTTAAGATTACAGCAGAATCACACACACTAATTTCAGATTATGTGTCATTAATAATGTTGGGAGGATTTGGGGTCAGCCCAATATACACCTCATAA | 2829 | 0.3606 | MISLVIFSQNYTTSKWCLDELVKIVECREKNGQILLPVFYKVDPTVVRHQKGTYGKAFFEHEKKHGLTKVQTWRSALKKSSDISGFHSSTFLDDAKLVEEIVKNVLKRLDHGRLVNSKGLVGIGKQISHVESLLQVESQDVHAIGIWGMNGIGKTTIAEEVYSKLCSEYDSCYFKADIREECRRHGIMYLKKELYSTLLRQQDLNIDIPHGLPYFVVRMLHRMKVLVVLDDVNDLQQLEILIGSTLDWFGNGSRIIITSGDKQVLAERGVDIYEVKALDFDDSLRLFTMYAFEQNHIYQKEYYELSKMMVNYATGIPSLLQVLGRQLRGKDKKVWENQLGRIKKRVPIKKVLEIFRLSYNDLDRHEKKILLDIACFFDGLHLKVDDIQLLVKDRDYSLGVELESLKNKALITISPDSVVSMHNIIQEAALEIVREESIDKLGKQSGRLDPDDIYYILKNNKGSAAIRSLAIDVSTIKELQLNPKVFAKMNKLRYLDIYSKGYSYNFLRSRGDLYLPQGLQSLPNELRYLRWARFPLESLPCTFSGEKLVVLDLQYSRVKQLWREDHKDLANLKYLKLGSSSHLLELPDLSNAKNLEVIDLRLCSGLTSVHPSVFTLNKLEKLDLGGCFSLRSFRSNIRFSSLRYLSLAGCTALKEFSVTSKEMVNLNLELTGIKQLPSSIGLQTKLEKLLLARSYIKYLPESIQLLTRLKHLDLQHCRKLRSLPKLPTSLITLNASGCVSLENVTFPSTFVQMLKENKTRVAFWNCLKLDQHSLKAIGLNAQINIKKFAHQHISISHDHDHDYDAQGTYVYPGSSVPEWLVYRTTHDYMTIDLSFANHSSQLGFIFCFIVPPVPSQGFILRFNISVDGGDDSQLHLDRPSREIKSDHVYLVSDRGFSRYLNGRVKVQPRFKLKITAESHTLISDYVSLIMLGGFGVSPIYTS | 942 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g00615 | 942 | Gene3D | - | 277 | 363 | IPR042197 | - | |
Tsu08g00615 | 942 | Gene3D | Ribonuclease Inhibitor | 662 | 771 | IPR032675 | - | |
Tsu08g00615 | 942 | Gene3D | Ribonuclease Inhibitor | 455 | 661 | IPR032675 | - | |
Tsu08g00615 | 942 | ProSiteProfiles | TIR domain profile. | 1 | 109 | IPR000157 | GO:0007165 | |
Tsu08g00615 | 942 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 2 | 941 | - | - | |
Tsu08g00615 | 942 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 108 | 373 | IPR027417 | - | |
Tsu08g00615 | 942 | Pfam | NB-ARC domain | 132 | 336 | IPR002182 | GO:0043531 | |
Tsu08g00615 | 942 | PRINTS | Disease resistance protein signature | 219 | 233 | - | - | |
Tsu08g00615 | 942 | PRINTS | Disease resistance protein signature | 313 | 327 | - | - | |
Tsu08g00615 | 942 | PRINTS | Disease resistance protein signature | 143 | 158 | - | - | |
Tsu08g00615 | 942 | PRINTS | Disease resistance protein signature | 704 | 720 | - | - | |
Tsu08g00615 | 942 | SUPERFAMILY | L domain-like | 470 | 766 | - | - | |
Tsu08g00615 | 942 | Pfam | TIR domain | 1 | 113 | IPR000157 | GO:0007165 | |
Tsu08g00615 | 942 | Gene3D | - | 110 | 274 | IPR027417 | - | |
Tsu08g00615 | 942 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 2 | 86 | IPR035897 | - | |
Tsu08g00615 | 942 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 2 | 941 | IPR044974 | GO:0006952 | |
Tsu08g00615 | 942 | Gene3D | - | 1 | 109 | IPR035897 | - | |
Tsu08g00615 | 942 | SUPERFAMILY | "Winged helix" DNA-binding domain | 349 | 437 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g00615 | Tsu-Chr8 | 6712573 | 6718256 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g00615 | 13 | 753 | WRKY Transcription Factor Family | AT4G12020 | 34.933 | 3.11e-105 | 358 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g00615 | - | - | cam:101503346 | 1186.79 |