Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00615 ATGATATCTTTGGTTATATTCTCTCAAAACTATACTACTTCAAAGTGGTGTTTGGATGAGTTAGTTAAAATTGTTGAATGTAGAGAGAAAAATGGACAGATTTTATTGCCTGTTTTCTACAAAGTGGACCCCACTGTTGTTAGGCATCAAAAAGGAACTTATGGAAAAGCATTTTTTGAACATGAAAAAAAGCATGGTTTGACCAAAGTGCAAACGTGGAGATCTGCTTTGAAGAAATCTTCTGATATCAGTGGCTTTCATTCCTCAACTTTTCTGGATGATGCTAAGCTTGTTGAAGAAATAGTTAAAAATGTGTTGAAGAGGTTGGATCATGGTCGTCTAGTTAATTCAAAAGGACTTGTTGGAATTGGAAAACAAATTTCACATGTGGAATCATTGTTACAAGTCGAGTCACAAGATGTTCATGCTATTGGAATTTGGGGGATGAATGGTATAGGTAAAACAACTATCGCAGAAGAAGTATATAGCAAGTTATGTTCTGAATATGACAGTTGTTACTTTAAAGCTGATATCAGAGAAGAATGTAGAAGACATGGAATAATGTATTTAAAGAAAGAGCTTTATTCTACTCTATTAAGGCAACAAGATTTGAATATTGACATACCACATGGATTGCCCTATTTTGTCGTGAGGATGCTTCATCGTATGAAGGTTCTTGTTGTTCTTGATGATGTCAATGATCTACAACAACTTGAAATCTTAATCGGATCAACACTTGATTGGTTTGGAAATGGTAGTAGAATAATCATAACAAGTGGAGACAAGCAAGTACTTGCCGAAAGAGGTGTTGATATATATGAGGTTAAGGCATTAGACTTTGATGACTCTCTTAGGCTTTTCACCATGTATGCCTTTGaacaaaatcatatatatcAAAAAGAGTACTATGAGTTGTCCAAGATGATGGTCAATTATGCCACAGGAATTCCATCTCTTCTTCAAGTTTTGGGTCGTCAGCTTCGTGGAAAAGATAAAAAAGTATGGGAAAACCAATTAGGGAGGATTAAAAAAAGAGTTCCGATTAAGAAAGTTCTTGAAATTTTTAGATTGAGTTACAATGATCTTGATCGACACGAGAAGAAGATACTTTTAGACATCGCATGTTTTTTTGATGGATTGCATCTCAAAGTTGACGACATACAACTGTTGGTAAAAGACCGTGATTATTCGTTGGGTGTTGAGTTGgaaagtttgaaaaataaagcTCTTATAACTATTTCTCCAGATAGTGTTGTATCCATGCACAACATTATACAAGAAGCAGCTTTGGAAATTGTTCGCGAAGAATCCATTGACAAGCTTGGAAAGCAAAGTGGACGTCTGGATCCTGATGATATTTATTATATACTGAAAAATAATAAGGGGAGTGCGGCTATTAGAAGCTTAGCTATCGATGTATCGACAATTAAAGAGCTGCAATTAAATCCAAAGGTGTTTGCAAAAATGAACAAACTACGATATTTGGATATTTATAGTAAGGGGTACTCTTATAATTTTCTCCGAAGCCGAGGTGACTTGTATCTTCCTCAAGGGCTTCAATCTTTGCCAAATGAACTCAGATACCTTCGTTGGGCACGTTTCCCTTTGGAGTCCTTACCATGTACTTTTTCTGGTGAAAAACTTGTTGTACTGGACTTGCAGTACAGCCGTGTGAAACAACTTTGGCGTGAAGATCATAAGGATCttgcaaatttaaaatatctgaAACTTGGTTCATCGTCACACCTGTTGGAGCTTCCAGACTTGTCAAATGCTAAAAATCTTGAAGTAATTGATCTTCGTCTATGTTCAGGGTTGACTAGTGTACATCCATCTGTCTTTACTCTCAATAAGCTTGAGAAATTGGACCTAGGTGGATGTTTTTCCCTCAGAAGCTTTCGAAGCAATATCCGTTTCAGCTCCCTTCGTTATCTCTCGCTTGCTGGTTGCACTGCACTAAAGGAGTTCTCAGTAACCTCAAAGGAAATGGTAAACTTGAATTTAGAACTAACAGGTATCAAACAACTACCATCATCaattggacttcaaaccaaacTTGAAAAGTTGCTTCTTGCACGCAGTTACATTAAGTACTTGCCTGAAAGCATCCAGCTTCTTACAAGGCTTAAACATCTAGACTTGCAACATTGTAGGAAGCTTCGAAGTCTACCGAAGCTTCCTACATCGTTGATAACTCTAAATGCAAGTGGCTGTGTATCATTGGAGAATGTAACTTTCCCTTCAACATTTGTTCAAATGTTAAAGGAAAACAAGACAAGGGTTGCATTCTGGAATTGCCTGAAACTCGATCAACATTCTCTCAAGGCAATAGGTTTGAATGCGCAAATTAACATTAAGAAATTTGCACATCAACATATATCCATATCTcatgatcatgatcatgatTATGATGCTCAAGGCACGTACGTGTATCCGGGAAGCAGTGTTCCAGAATGGTTGGTATATAGGACAACACATGATTACATGACTATTGATCTTTCTTTTGCTAACCATTCCTCTCAATTGGGCTTCATATTTTGCTTCATTGTTCCACCAGTTCCATCACAGGGTTTCATTTTGAGATTTAATATTAGTGTTGATGGAGGTGATGATAGTCAATTGCACTTGGATAGGCCAAGCCGAGAAATTAAATCAGATCATGTGTATTTAGTATCTGACCGAGGTTTTTCTCGCTATCTCAATGGCCGAGTCAAAGTTCAGCCAAGGTTCAAACTTAAGATTACAGCAGAATCACACACACTAATTTCAGATTATGTGTCATTAATAATGTTGGGAGGATTTGGGGTCAGCCCAATATACACCTCATAA 2829 0.3606 MISLVIFSQNYTTSKWCLDELVKIVECREKNGQILLPVFYKVDPTVVRHQKGTYGKAFFEHEKKHGLTKVQTWRSALKKSSDISGFHSSTFLDDAKLVEEIVKNVLKRLDHGRLVNSKGLVGIGKQISHVESLLQVESQDVHAIGIWGMNGIGKTTIAEEVYSKLCSEYDSCYFKADIREECRRHGIMYLKKELYSTLLRQQDLNIDIPHGLPYFVVRMLHRMKVLVVLDDVNDLQQLEILIGSTLDWFGNGSRIIITSGDKQVLAERGVDIYEVKALDFDDSLRLFTMYAFEQNHIYQKEYYELSKMMVNYATGIPSLLQVLGRQLRGKDKKVWENQLGRIKKRVPIKKVLEIFRLSYNDLDRHEKKILLDIACFFDGLHLKVDDIQLLVKDRDYSLGVELESLKNKALITISPDSVVSMHNIIQEAALEIVREESIDKLGKQSGRLDPDDIYYILKNNKGSAAIRSLAIDVSTIKELQLNPKVFAKMNKLRYLDIYSKGYSYNFLRSRGDLYLPQGLQSLPNELRYLRWARFPLESLPCTFSGEKLVVLDLQYSRVKQLWREDHKDLANLKYLKLGSSSHLLELPDLSNAKNLEVIDLRLCSGLTSVHPSVFTLNKLEKLDLGGCFSLRSFRSNIRFSSLRYLSLAGCTALKEFSVTSKEMVNLNLELTGIKQLPSSIGLQTKLEKLLLARSYIKYLPESIQLLTRLKHLDLQHCRKLRSLPKLPTSLITLNASGCVSLENVTFPSTFVQMLKENKTRVAFWNCLKLDQHSLKAIGLNAQINIKKFAHQHISISHDHDHDYDAQGTYVYPGSSVPEWLVYRTTHDYMTIDLSFANHSSQLGFIFCFIVPPVPSQGFILRFNISVDGGDDSQLHLDRPSREIKSDHVYLVSDRGFSRYLNGRVKVQPRFKLKITAESHTLISDYVSLIMLGGFGVSPIYTS 942
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00615 942 Gene3D - 277 363 IPR042197 -
Tsu08g00615 942 Gene3D Ribonuclease Inhibitor 662 771 IPR032675 -
Tsu08g00615 942 Gene3D Ribonuclease Inhibitor 455 661 IPR032675 -
Tsu08g00615 942 ProSiteProfiles TIR domain profile. 1 109 IPR000157 GO:0007165
Tsu08g00615 942 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 2 941 - -
Tsu08g00615 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 373 IPR027417 -
Tsu08g00615 942 Pfam NB-ARC domain 132 336 IPR002182 GO:0043531
Tsu08g00615 942 PRINTS Disease resistance protein signature 219 233 - -
Tsu08g00615 942 PRINTS Disease resistance protein signature 313 327 - -
Tsu08g00615 942 PRINTS Disease resistance protein signature 143 158 - -
Tsu08g00615 942 PRINTS Disease resistance protein signature 704 720 - -
Tsu08g00615 942 SUPERFAMILY L domain-like 470 766 - -
Tsu08g00615 942 Pfam TIR domain 1 113 IPR000157 GO:0007165
Tsu08g00615 942 Gene3D - 110 274 IPR027417 -
Tsu08g00615 942 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Tsu08g00615 942 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 941 IPR044974 GO:0006952
Tsu08g00615 942 Gene3D - 1 109 IPR035897 -
Tsu08g00615 942 SUPERFAMILY "Winged helix" DNA-binding domain 349 437 IPR036390 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu08g00615 Tsu-Chr8 6712573 6718256 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00615 13 753 WRKY Transcription Factor Family AT4G12020 34.933 3.11e-105 358
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00615 - - cam:101503346 1186.79