Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00614 ATGCACACAATAGAATGGATACTAATATGTTTAACTTTGATTAGTCTGCCAAAACCAGTAGTTGAAGATCATCCATACAATAATGTTCCTgaaattcttcatcatcatcatcatgatcatcATCATAAGTATGATGTCTTTGTTAACTTTCGTGGTTCAGACATCCGCGAAGGTTTTCTTGCTCATTTGATTAAAGCTTTATCTGAAAAGAAAATTGTTACCTTCGTAGATTATGAACTCGAAAGAGGAGATGAAATATCAGCACTTTTTGATGCAATTGAAACATCATTGATATCTTTGGTTATATTCTCTCCAAACTATACTAATTCAGCTTGGTGTTTGGATGAGTTAGTCAAAATTGTTGAATGTAGAGAAAAAAATGGACAGATTTTATTGCCTGTTTTCTACAAATTGGACCCTGCTATTGTGAGGAATCAAAATGGAAACTATGGAAATATTGCAGTTGCTGAACAAGAAAAGAGGTTCAGTTCCAGCAGGGTGCAAAAGTGGAAATCTGCTTTGAGGAAATCTGCTGATATAAGTGGCTTTCCTTCCTCTGATTTTTCGGATGATGCTAAGCTTATTGAAAAAATAGTTAAAGTTGTGTTGAAGAGGTTGGATCATGGGCGTCTAGTTAATTCAAAAGGAATTGTTGGAATTGGAAAACAAATTTTACATGTGGAATCATTGTTACAATTAGAGTCACAAGATGTTCGTGCTATTGGAATATGGGGGATGAGTGGTATAGGTAAAACAACCATTGCAGATGAAGTATATAACAAACTCGGTTCTGATTACGAAGGTTGTTACTTTAAGGCTCATGTGAATGAAGAAACAAGAAGACGCGGAATTATGTCTTTAAAGGAAGAGCTTTATTCTACTCTATTAGGGGACCAAGATTTGAAAATTGACACACTAAATGGATTGCCATACTATGTTGAGAGAAGGCTTCGTCGTATGAAGGTTCTTGTTGTTCTTGATGATGTCAATGATCTACAACAACTAGAAACTTTAATTGGATCAAAACTTGATTTGTTTGGAAATGGTAGTAGAATAATCATCACAAGTGGAGACAAACAAGTACTATTTGCCGGAGGGGTCGATGATATATATGAAGTTAAGCCATTAAACTTTAATGACTCTCTTAGGCTTTTCAATTTAAATGcctttaaacaaaatcaaaaagagTACAAGGAGTTGTCTAAGATGATGGTTAAGTATGCTGAAGGAATTCCACTTGTTCTTAAAGTTTTGGGTGGTCTGCTTCGTGGAAAAGATAAACAAGTATGGGAAGACTTTTTAGGGAggtttagaaaaaatattccaATTAAAACAGTTCATCCAATTTTCAGATTGAGTTACAATGATCTTGACGATCGTGAGAAGAAGATATTTCTAGACATTGCATGTTTTTTCAATGGATTACATCTCAAAGTTGACGACATACAACTGTTGCTAAAAGACCATGATTATTCGGTTGGTGTTGAGTTGGAAAGTTTGAAGAATAAAGCTCTTATAACTATTTCTCCAGATAATGTTGGGAGTGAGGCTATTAGAAGCTTAGCTATCGATGTGTCGACAATTAAGGAGCTGCAGTTACATCCAAAGGTGTTTGCAAAAATGAACAAACTACGATATTTGGATATTTATAGTAACGGGTACTCTTATGATTTTCTCCGAAGTCGAGGGGGCTTGAATCTTTCTCAAGGGCTTGAATATTTGCCAAATGAACTCAGATACCTTCGTTGGGCACGTTTCCCTTTGGAGTCCTTACCATGCTCTTTTTCTGGTGAAAATCTTGTTGTATTGGACTTGCAGTACAGCCGTGTGAGAAAACTTTGGCATGATGATCATAAGGATCTTGCAAATTTAAAATACCTTAAACTTGGTTCATCATCGGACCTATTGGAGCTTCCAGACTTGTCAAATGCTAAAAATCTTGAAGTAATTGATCTTCGTCTCTGTACTGGGTTGAAAAGTGTACATCCATCTGTCTTTACTCTCAATAAGCTTAAGAAATTGGACTTAGGTGGATGTTTTTCCCTCAGAAGCTTTCGAAGCAATACCCGTTTCAGCTCCCTTCATTATCTCTCCCTTGCTGGTTGCCCTGCACTAAATGAGTTCTCAGTAATCTCAAAGGATATGGTAATGTTGAATTTAGAACTAACAGGTATCAAACAACTACCATCAACaattggacttcaaaccaaacTTGAAAAGTTGCTTCTTGCACACAGTTACATTGAGAACTTGCCTGAAAGCATCAAGCTTCTTCCAGGGCTTAGACATCTAGACTTGCGGCACTGTAGGAAGCTTCGAAGTCTACCAGAACTTCCTTCATCGTTGATAACTCTAAATGCCAGTGACTGTGTATCATTGGAGAATGTTACCTTCCCTTCAACTGCTGTTCAAATATTAAAGGAAGACAAAAGAAGAGTGGCATTCTGGAATTGCTTGAAACTGGATCAACATTCTCTCAAGGCAATCGGGTTGAATGCACAAATTAACATTAAGAAATTTGCACGTCAGCATATATCCATATCTCGTGATCATGATGATTATGATGCTCAAGGCACGTACGTGTACCCGGGAAGCAGTGTTCCAGAATGGTTGGTGTATAGGACAACACATGATTACATGACTATTGATCTCTCTTTTATGAACCATTCCTCTCAATTGGGCTTCATATTTTGCTTCATTGTTCCACCAGTTCCATCACAGGGTTCCATTTTGAGATTTAATATTAGTGTTGATGAAGGTGATGATAGTCAATTGCACTTGGATAGGACAAGCCGTGAAATTAAATCAGATCATGTGTATTTAGTATCTGACCGAGGTTTTTCTCGCTATCTCAATAGCCGAGTCAAAGTTCAGCCAAGGTTCAAAATTAAGATTACAGCAGAATCACACACACTAATTTCAGATCATGTGTCATTAATAATGTTGAGAGGATTTGGGGTCAGCCCAATATACACTTCCTAA 2982 0.3592 MHTIEWILICLTLISLPKPVVEDHPYNNVPEILHHHHHDHHHKYDVFVNFRGSDIREGFLAHLIKALSEKKIVTFVDYELERGDEISALFDAIETSLISLVIFSPNYTNSAWCLDELVKIVECREKNGQILLPVFYKLDPAIVRNQNGNYGNIAVAEQEKRFSSSRVQKWKSALRKSADISGFPSSDFSDDAKLIEKIVKVVLKRLDHGRLVNSKGIVGIGKQILHVESLLQLESQDVRAIGIWGMSGIGKTTIADEVYNKLGSDYEGCYFKAHVNEETRRRGIMSLKEELYSTLLGDQDLKIDTLNGLPYYVERRLRRMKVLVVLDDVNDLQQLETLIGSKLDLFGNGSRIIITSGDKQVLFAGGVDDIYEVKPLNFNDSLRLFNLNAFKQNQKEYKELSKMMVKYAEGIPLVLKVLGGLLRGKDKQVWEDFLGRFRKNIPIKTVHPIFRLSYNDLDDREKKIFLDIACFFNGLHLKVDDIQLLLKDHDYSVGVELESLKNKALITISPDNVGSEAIRSLAIDVSTIKELQLHPKVFAKMNKLRYLDIYSNGYSYDFLRSRGGLNLSQGLEYLPNELRYLRWARFPLESLPCSFSGENLVVLDLQYSRVRKLWHDDHKDLANLKYLKLGSSSDLLELPDLSNAKNLEVIDLRLCTGLKSVHPSVFTLNKLKKLDLGGCFSLRSFRSNTRFSSLHYLSLAGCPALNEFSVISKDMVMLNLELTGIKQLPSTIGLQTKLEKLLLAHSYIENLPESIKLLPGLRHLDLRHCRKLRSLPELPSSLITLNASDCVSLENVTFPSTAVQILKEDKRRVAFWNCLKLDQHSLKAIGLNAQINIKKFARQHISISRDHDDYDAQGTYVYPGSSVPEWLVYRTTHDYMTIDLSFMNHSSQLGFIFCFIVPPVPSQGSILRFNISVDEGDDSQLHLDRTSREIKSDHVYLVSDRGFSRYLNSRVKVQPRFKIKITAESHTLISDHVSLIMLRGFGVSPIYTS 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00614 993 Gene3D - 40 208 IPR035897 -
Tsu08g00614 993 PRINTS Disease resistance protein signature 240 255 - -
Tsu08g00614 993 PRINTS Disease resistance protein signature 666 682 - -
Tsu08g00614 993 PRINTS Disease resistance protein signature 408 422 - -
Tsu08g00614 993 PRINTS Disease resistance protein signature 316 330 - -
Tsu08g00614 993 SMART till_3 43 180 IPR000157 GO:0007165
Tsu08g00614 993 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 525 992 - -
Tsu08g00614 993 Gene3D - 209 365 IPR027417 -
Tsu08g00614 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 525 992 IPR044974 GO:0006952
Tsu08g00614 993 Gene3D - 376 458 IPR042197 -
Tsu08g00614 993 Pfam NB-ARC domain 230 431 IPR002182 GO:0043531
Tsu08g00614 993 Gene3D Ribonuclease Inhibitor 486 714 IPR032675 -
Tsu08g00614 993 Gene3D Ribonuclease Inhibitor 715 807 IPR032675 -
Tsu08g00614 993 Pfam TIR domain 43 208 IPR000157 GO:0007165
Tsu08g00614 993 SUPERFAMILY L domain-like 521 798 - -
Tsu08g00614 993 ProSiteProfiles TIR domain profile. 42 206 IPR000157 GO:0007165
Tsu08g00614 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 468 IPR027417 -
Tsu08g00614 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 183 IPR035897 -
Tsu08g00614 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 515 IPR044974 GO:0006952
Tsu08g00614 993 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 32 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00614 Tsu-Chr8 6700813 6706656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00614 44 789 WRKY Transcription Factor Family AT4G12020 32.927 8.84e-102 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00614 - - cam:101503346 1117.06