Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00604 ATGCCGACGAGTATGATTTCAGTCTCTTCCCTCAAGTTCAATCTCACCAACAGGATCGTCCGTCTCTTCCCTGAAATCGATGTGGATCCCACCGATTGGTTCGTCTCCCTCCACGAATCAACTCAGCGGAACCTTCAGCAATCTCAGAGACCTAGCAAAGTTAATGCCCAGGGAAGACTCGGGAAGCTCCGATGGAATTTCTTCAGCAGGAAAACCTGTCTCTACGACTTTCCTAAGGAGGAGTGCAAAGTCAATTTACCTGCTAAAGAAATTCCATTGGAGCTTCCCGAGCCTTCCCCGGGCAATAACTTTGCTAGGTCTGGAATGCAAAAAATAGATTGGCTTTCCTCAGTTACTGCTCATTGCGATTCATGGTTATTTGCCGTTGCATTCTATTATGGAGCTCCATTTGGGTTTAACAAATCTGACAGTGGGAAGAAGAATCTTCCTACCATTTCTCCACCCCCAATCATACAATCCACCGCCACACTCTCCGCCTCCCACCACCAACACGCCAATGAGTACGATGACAAGTTCAATCTCACCAACAGGATTGTCCGTCTCTTCCCTGAAATTGATGTGCACTCACTGATTGGTTACTCTCCCTCCATGAATTTACTCAGTGGAACTTTAGCTAGCTTCAGAGCGAGATTCTGGATCCATGTCAGAAGGAGACGGATTCGTTTCATTCTCTTCCCATTTTGCTTCAAATTCAGATGGTGA 723 0.4647 MPTSMISVSSLKFNLTNRIVRLFPEIDVDPTDWFVSLHESTQRNLQQSQRPSKVNAQGRLGKLRWNFFSRKTCLYDFPKEECKVNLPAKEIPLELPEPSPGNNFARSGMQKIDWLSSVTAHCDSWLFAVAFYYGAPFGFNKSDSGKKNLPTISPPPIIQSTATLSASHHQHANEYDDKFNLTNRIVRLFPEIDVHSLIGYSPSMNLLSGTLASFRARFWIHVRRRRIRFILFPFCFKFRW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00604 240 Pfam Alfin 71 142 IPR021998 GO:0006355|GO:0042393
Tsu08g00604 240 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 5 73 168 - -
Tsu08g00604 240 PANTHER CPG BINDING PROTEIN 73 168 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00604 Tsu-Chr8 6546113 6549050 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00604 73 207 Alfin-like Transcription Factor Family AT5G20510 38.571 2.25e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00604 - K23901 egr:104438152 106.301