Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00592 ATGTTGACTTGCATAGCTTGTTCTAAGCATCTTAATAATGGATCTCTTCCTCCTCAAGAAGAGGATGAAGCTGTGCAAACACCTAGTACTAAACAAGCCATCAAAGCTATCACTGCTCAGatCAAGGATATGGCAGTGAAGGCTTCTGGAGCTTATAAGAATTGTAAGCCTTGTTCAGGATCTTCTAATGGTAACAAGAACAAAAAGTATGCTGATTCTGATATGGGATCAGATTCAGCAAGATTCAACTGTGCGTATCGGAGAACCGGGAGCGCGAGTTCTACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCGAGTGGGGAAGGAACACCAACATCGGTGAGTGGACGTACCGAGTCAGTTGTGTTCATGGAAGATGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCCCAAGGTGGGAATGATCTAAAGAGGATACGGTTCAGtcGTGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGACAAGGTTATGGAGTTATACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTCCCAACCCCACCCAGATCTGAAGATGAGAGTTCAAAGATTGAATCTGCAAGGGACAGCCCTGTCACACCTCCTCTCAGCAAAGAGCGTCTGCCTCGTCACATTCACCACCAAATGGGAATGGGCTACTCCTCATCGGATTCTTTGGATCACCACCATATGCAACCTCAGCCTTTCTATGAAACAAGCCGTCTAGCATCAAAACCCAATCTTTCTAACATTGGTGTGTCAAAGACCGAAAGATCATCCATTGATGCTTCTGTAAGGACGAGTTCATCGGGAGATGAAGAAGATCACTCGGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAGTGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTACCAGGTGGAACCCGAGAACTTAGGCGCGTCCGCTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCGAGGATACAAGAGCAATACTTGTGA 1113 0.4564 MLTCIACSKHLNNGSLPPQEEDEAVQTPSTKQAIKAITAQIKDMAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNCAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEDEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERLPRHIHHQMGMGYSSSDSLDHHHMQPQPFYETSRLASKPNLSNIGVSKTERSSIDASVRTSSSGDEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00592 370 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 370 IPR044532 -
Tsu08g00592 370 MobiDBLite consensus disorder prediction 200 314 - -
Tsu08g00592 370 Pfam Transcription factor regulating root and shoot growth via Pin3 314 369 IPR013591 -
Tsu08g00592 370 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Tsu08g00592 370 MobiDBLite consensus disorder prediction 262 292 - -
Tsu08g00592 370 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Tsu08g00592 370 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 370 - -
Tsu08g00592 370 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Tsu08g00592 370 ProSiteProfiles BRX domain profile. 315 370 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00592 Tsu-Chr8 6428449 6432390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00592 1 370 Major Intrinsic Protein MIP AT1G31880 48.586 3.72e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00592 - - gmx:100805480 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00592 08 6428449 6432390 Tsu08g00592 08 6428449 6432390 ECH