Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00559 ATGGCGAATAATGAATCAAAATCCGATCAAAATTCCGAAACCCGATTCTACAATCCATACAAAGACCTCGAAGTTCCTATCCGAAATCTCTACCAACTCCCAACCTCTCCGGAGTTTCTCTTCGACGAAGAAGCTCGCCGTAAACGCCGTTCTTGGGGCGAAAATCTAACCCTTTACACTGGATGCAGTTACCTCGCCGGTTCAATTGCCGGTGCCGGAGTCGGACTCGTTGACGGTGTTCGATCTTTTGAGTCCGGTGATACCATGAAGCTTCGGGTTAATCGTATTCTTAACTCGTCTGGACATGCTGGTAGGACATGGGGAAACCGTGCTGGGATCATTGGGTTGCTTTATGCTGGAATTGAGAGTGGGATTGAAGCTGTGAGAGATACTGATGATGCTTGGAATAGTGTTGCGGCGGGGCTTGGGACCGGTGCGCTTTATCGAGCGGCAAGAGGGGTTAGATCGGCTGCTGTGGCTGGTGCTGTTGGTGGTGTTCTTGTTGGAGCTGCTGTGACTGCTAAGCAGGTGTTGAAAAGATATGTGCCTATATGA 555 0.4973 MANNESKSDQNSETRFYNPYKDLEVPIRNLYQLPTSPEFLFDEEARRKRRSWGENLTLYTGCSYLAGSIAGAGVGLVDGVRSFESGDTMKLRVNRILNSSGHAGRTWGNRAGIIGLLYAGIESGIEAVRDTDDAWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVTAKQVLKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00559 184 PANTHER TIM23 1 184 IPR045238 GO:0022857
Tsu08g00559 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 1 184 - -
Tsu08g00559 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 60 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00559 Tsu-Chr8 6101726 6102280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00559 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 69.892 3.44e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00559 K17794 - gmx:100813158 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05341 02 62005659 62006626 Tsu08g00559 08 6101726 6102280 PCT