Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00540 ATGAAAAGTAAAGTAGGAGTAAGGCTCTCATTCTCATATCTTGGGTGGAGGGCAGGCTGGTTATCACAGGAAGTACAGTGTGCCGAAAGAAGCCGGTGTTCAGTAGTCAGTTTTGTTAAATTGGATGTATTTAAGGTTAATGACTTTGTATGCATATCCTTGACTCCCTCTTATAAAGAGATGGAAAACATGGTGAATTTCCTTGCTGAGCTATCTATGATGCATTATGCTGCTGTCTACTCGTATTGCCCTTCAATGATAGCTGCTTCTGCTGTTTATGCGGCAAGATCTACCATCGGAAGGAGCCCTGTTTGGACTGATACTCTGAAGCACTACACAGGCTACTTTGAGGAACAACTAAGTTACTAA 369 0.4201 MKSKVGVRLSFSYLGWRAGWLSQEVQCAERSRCSVVSFVKLDVFKVNDFVCISLTPSYKEMENMVNFLAELSMMHYAAVYSYCPSMIAASAVYAARSTIGRSPVWTDTLKHYTGYFEEQLSY 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00540 122 Gene3D - 29 122 - -
Tsu08g00540 122 SMART cyclin_7 47 121 IPR013763 -
Tsu08g00540 122 SUPERFAMILY Cyclin-like 57 120 IPR036915 -
Tsu08g00540 122 Pfam Cyclin, C-terminal domain 57 120 IPR004367 -
Tsu08g00540 122 PANTHER CYCLINS 57 120 IPR039361 -
Tsu08g00540 122 CDD CYCLIN 59 119 IPR013763 -
Tsu08g00540 122 PANTHER CYCLIN-B1-4 57 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00540 59 120 Core Cell Cycle Gene Families AT4G37490 59.677 9.09e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00540 K21777 - jre:108983792 101.679