Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00523 ATGCGTAACTCTCACAAAACGTATGATGTATTCATAAGCTTTAGGGGAGAGGACACACGTACAAACTTCACTGCCCAACTTCATCAAGCTCTTACCAATAGAAACATTGAATCATACATTGATTATAATCTTGTTAAGGGACATGAGGTTGGACCTGCTCTTGCAAAAGCTATTGAGGACTCGCATATGTCTCTTGTAGTTTTCTCAGAAAACTATGCAACCTCAAAGTGGTGCTTGGATGAACTCCTCCATATACTCAAATGCAGAGAACTTCATGGACAAGTGGTTATACCTGTGTTCTGTAACATAGATCCATCACATGTACGGAAGCAGACAGGGAGTTACGAGATGGCATTTGCAAGATATGAGAGAGATCTCGCCAAATCGCATGTAAACAAAGTGTCCGAGTGGAAACATGGTCTCACTCAGGCTGCCAATATATCTGGATGGGATTCTCGCAAATATAGggaTGATTCTCAAGTCATCTACAATATTGTGGAAGATGTTTTGCAGAAGTTGTCCCTCATGTATCCTAATGAACTGAAAGACCTCGTTAAAGTTGATGAAAACAGTGAACATATTGAATTATTAGTGAAAACAATACCAAGAATTGGAATTTGGGGCATGAGTGGAATAGGAAAGACAACCATAGCCATACAGATGTTTGCTAAGAACTTTGCCCATTATGATAATGTATGCTTCTTGGAAAAGGTAAGCGAAGAATCAGAAAAGTTTGGACAAACATATGTTCGTGATAAGCTTCTTAGTAAGCTACTGAAGCGAGAAATTACTGCATCTGATGTTCATGGACAACACACATTCATCAAGAGGAGGCTTGGTGGTAAAAAAAGTTTCATTGTACTCGATGATGTTGACAATGCTGCACAATTAGATGATTTATGTGGAGTGCTTAATGACCTTGGACCTAATAGTAGACTCATTATCACAACAAGAGACAGACATACACTTAGTGGAAAAGTTGATGAAATTTATGAGGTCACAACATGGAAGCTTAAAGACTCTCTAAAGCTTTTTAGCTTAGGAGCATTCAAGCAAAGCCATCCTAGAAAGGGTTACGAGCGTATCTCGGAAAGGGCAGTTGAATACGCAGGAGGTGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTCATTCCAAAACACCAAAATTCTGGGAATCTGAGTTGAATGATTATGAGAACAAGGGAGAAGCCTTCCAGAAAATTCAAAAAGTGCTAAGAGCGAGTTATAATGGGTTATCATGGCGACAGAAGGAAATGTTTCTAGACATTGCATTCTTTTTCAAAGGTGAAAACAAAGACTTCGTCACAAGTATACTAGACGCCTTTGGTTTCAATGCAACTAGTGGGATAGAAATCCTCGAAGATAAAGCTCTTATAACCATTTCAAACAACAGTAGAATACAAATGCACGACTTATTACAAAAGATGGCCTATGATATAGTTCAAGAAGATTATAATGACCGAGGAAAGCGTAGCCGACTGAGGGATGCTAAAGACATTTGTGAAGTACTTGAAAATAACAAGgGGGCTGATGTTGTTGAAGGCATACTATTTGATTTGTCTCAAAAAGAAAATCTATGTGTTAAAGCTGACACGTTCAAAATAATGGTTAATCTAAGATTTCTTAGATTATATGTCCCTTTGGGTGAGAAGAGATTGACTACCTTGTCTCAATCTGATCAAGGCATTATGAGATTTCCTGATAAACTTACATACCTTGAGTGGAACGGATACCCTCTGAAGTCTCTTCCAGATCCTTTTTGTGCTAAGTTTCTTGTTGAGATTCGCTTGCCACATAGCAATGTAGAATATCTCTGGCACGGGTTGCAGGAACTAATGAATTTAGAGGCAATCAACCTAAGTGGGTGCAAACATTTGATCAACCTCCCAGATTTGTCTCAGGCATCAAAACTTAAATGGTTGTACCTTTCAGGTTGTGAAAGTTTGTGTGAAATTCAACCTTCCATTTTTTCGAAGGACACACTTGTAACTTTGATACTTGATAGGTGTACAAAACTAAAAAGTCTAAAGGGTGAAAAACACTTAAGATCTCTGCAGAAGATCAGTGTCTACGGCTGCTCAAGCCTTAAGGAATTTTCCTTGTCCTCAGATTCAATTGAGAGTTTGGATTTAAGCAATACAGGAGTTGAAATATTGCACTCATCAATAAGTGGTATGAGCAAGCTTGGGTGGCTCAATTTAGAAGGTTTGAAACTCTCGAATCTACCAAATGAGTTGTCTTGTCTGGAATTACTTACGGAGCTTGGACTTTCTAACTGTGGTATAGTAACTAAATCAAAGTTAGAAGGCATATTTGACGGCTTGAGGTCATTGAAAACACTATATTTGAAACATTGTGTCAACTTGCTTGAACTCCCTACAAACATTGGTTCTTTATCATCATTGTATGAGTTAAGACTAGATGGAAGTAGTGTGGAGATGCTACCTTCAAGCATGAAGTTTCTCTCTCAGTTAGAGATTTTAGGCTTAAACAATTGCATAAAGCTTCATTCTCTCCCAGAGCTTCCTCTAGAAATCAAGGAGATACATGCCGAAAACTGCGCTTCATTGGTCACTGTGTCCAGTTTGAAGACTTTTCCAGAACAGATGAAAGGAAAGAAGAAATACATTTCATTCAAGAATGACATGATgatgaattcaaatcaaccttCACTCGATCACGTTGTGGAAGATGTCATATTGACAATGAAGAGTGCTGCATTTCACAACATATTAGTAAGACAACACAGGTTGGATGCCGACAGCTACAATTACAACAGTGCAGTGGTTTGTTTACCAGAAAGCAAAGTTCCAAGGcagttcaaattcaaaacatcAGAATCCAAAATACCTATTGGATTTCCTGACATAAATTCCTCAATTGGATTCATTTTCTCAGTGGTTATTTCTCCATCCAATAGAATGAAAAATGAGCAAGGTAATGGTGCTAAAATTCAATGTAAATGCTATGGTGAAGACGGCAATAGGGTGGGATTA 3021 0.3764 MRNSHKTYDVFISFRGEDTRTNFTAQLHQALTNRNIESYIDYNLVKGHEVGPALAKAIEDSHMSLVVFSENYATSKWCLDELLHILKCRELHGQVVIPVFCNIDPSHVRKQTGSYEMAFARYERDLAKSHVNKVSEWKHGLTQAANISGWDSRKYRDDSQVIYNIVEDVLQKLSLMYPNELKDLVKVDENSEHIELLVKTIPRIGIWGMSGIGKTTIAIQMFAKNFAHYDNVCFLEKVSEESEKFGQTYVRDKLLSKLLKREITASDVHGQHTFIKRRLGGKKSFIVLDDVDNAAQLDDLCGVLNDLGPNSRLIITTRDRHTLSGKVDEIYEVTTWKLKDSLKLFSLGAFKQSHPRKGYERISERAVEYAGGVPLALKVLGSHFHSKTPKFWESELNDYENKGEAFQKIQKVLRASYNGLSWRQKEMFLDIAFFFKGENKDFVTSILDAFGFNATSGIEILEDKALITISNNSRIQMHDLLQKMAYDIVQEDYNDRGKRSRLRDAKDICEVLENNKGADVVEGILFDLSQKENLCVKADTFKIMVNLRFLRLYVPLGEKRLTTLSQSDQGIMRFPDKLTYLEWNGYPLKSLPDPFCAKFLVEIRLPHSNVEYLWHGLQELMNLEAINLSGCKHLINLPDLSQASKLKWLYLSGCESLCEIQPSIFSKDTLVTLILDRCTKLKSLKGEKHLRSLQKISVYGCSSLKEFSLSSDSIESLDLSNTGVEILHSSISGMSKLGWLNLEGLKLSNLPNELSCLELLTELGLSNCGIVTKSKLEGIFDGLRSLKTLYLKHCVNLLELPTNIGSLSSLYELRLDGSSVEMLPSSMKFLSQLEILGLNNCIKLHSLPELPLEIKEIHAENCASLVTVSSLKTFPEQMKGKKKYISFKNDMMMNSNQPSLDHVVEDVILTMKSAAFHNILVRQHRLDADSYNYNSAVVCLPESKVPRQFKFKTSESKIPIGFPDINSSIGFIFSVVISPSNRMKNEQGNGAKIQCKCYGEDGNRVGL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00523 1007 Pfam NB-ARC domain 204 405 IPR002182 GO:0043531
Tsu08g00523 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 431 IPR027417 -
Tsu08g00523 1007 Gene3D Ribonuclease Inhibitor 472 711 IPR032675 -
Tsu08g00523 1007 Gene3D Ribonuclease Inhibitor 712 895 IPR032675 -
Tsu08g00523 1007 SUPERFAMILY L domain-like 477 849 - -
Tsu08g00523 1007 Gene3D - 337 421 IPR042197 -
Tsu08g00523 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Tsu08g00523 1007 SMART till_3 7 147 IPR000157 GO:0007165
Tsu08g00523 1007 PANTHER NB-ARC DOMAIN PROTEIN 12 958 - -
Tsu08g00523 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 958 IPR044974 GO:0006952
Tsu08g00523 1007 PRINTS Disease resistance protein signature 618 634 - -
Tsu08g00523 1007 PRINTS Disease resistance protein signature 370 384 - -
Tsu08g00523 1007 PRINTS Disease resistance protein signature 203 218 - -
Tsu08g00523 1007 PRINTS Disease resistance protein signature 278 292 - -
Tsu08g00523 1007 ProSiteProfiles TIR domain profile. 6 173 IPR000157 GO:0007165
Tsu08g00523 1007 Gene3D - 4 173 IPR035897 -
Tsu08g00523 1007 Gene3D - 174 330 IPR027417 -
Tsu08g00523 1007 Pfam TIR domain 8 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00523 Tsu-Chr8 5409941 5479970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00523 3 837 WRKY Transcription Factor Family AT4G12020 30.884 1.52e-89 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00523 - - cam:101489032 1464.13