Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00521 ATGGGCATTGCATATGCTGGAGGCATTCCATTAGCCTTAAAAGTTTTGGGTTCTCATTTGTATTCCAGAGAACCTATTTTCTGGGAATCTGAATTGAAACATCTTGAGAACAATGTGGAATCTTTGAGCAAAATTGAGAAAGTGTTAAAACGGAGTTATGATGGATTAACAATACGGGAGAAAGAAATCTTTCTAGACATTGTGTTCTTTTACAACAATGTAAATAAAGGTTTCTGTATGAGGATACTAGATGCATGTGGTTTTGATGCTCTCAGTGGAATAAAACTTCTTGAAGATAAAGCTCTTGTAACCATTTCAAGAAGTTATACAATACAAATGCATGACCTACTAAAAAAATTGGCTTTGCAGATAGTTCGGTACCAAAAATATTGTATTCCTAGAAGCCCAGAAGAGCGTAGTAGATTGCGTGATACTGAAGAAGTTCGTGATGTATTTAAAAGTAGTGAGAAAACTCCAGTTGAAGGAATACAATTTGATTTATCTCAAGATGTAAAGTTAGATGTTCAAGTTGACACATTCAGCAAGATGAAAGAATTAAGATTTCTTAGATTAAATGTCCCCCGGGGTAAGAAGAGATCGACTACTGTAAAAATTCCAGAAGATCTCATGCCATTTCCTGATAAATTGAGGTATCTTGAGTGGAATGGATACCCATTAAGGACTCTTCCACAACCTTTTGGTTCTGAGCGACTTCTTGAGATTCATCTGCAGAATAGTGATGTTGAATATCTCTGGCACGGGAAGCAGAAACTTGTGAATTTAAAAGGAATGAACCTAAGAGAATGCAAAAAGTTGATCAAACTCCCTGATTTGTCTGGGGCATCAAAACTCAAATGGCTACATCTATCAGGTTGTGAAAGTTTATGCGAAGTCAACCCTTCTGTGTTTTCAAATGACACACTTGTTGCATTGATGCTAGATAGGTGCATAAAACTTCCAAATCTTATAAGTGTGAAGCATTTGACATCTCTTGAGAAGATCGATGTATATGGATGCTCCAGCCTAAAGGTATTTTCACTGTCCTCTGATTCAATTGAAAGGTTGAATTTAAGTAATACAGGAACTGAAGTATTGCACTCATCAATTGGTGGTATGAGGAAGCTTTTGTCACTCAATTTGGAAGGTTTAAGACTTCAAAATCTACCAAATGAACTGTCTTGCCTGAGATCACTTACTGATCTTCGCCTTTCTGATTGTGATTTAGTAACTAAATCAAAGTTAGAAACCGTGTTTGATGTCGAACTGAGATCATTGAAAATACTATATTCGAAAGAATGTGGTAATTTGCTTGAACTACCTACAAATATCTATTCCTTATCATCATTGTATGAATTAAAACTAGATGGAAGCAATGTGGAGATGTTGCCTGTTAGCATTGAGTGCCTCTCGGAGCTATACATTCTATCAATAAAAACTTGCAGGAAGCTTCGCTCTCTTCCGAAACTCCCTCCACACGTCAAAGAGTTGCATGCCGATAACTGCACTTCATTGTTGAAGGTGTCCACTTTAAAGACTTTCTCAGAAAGCATGAATGGAGAGAATAAATACATTTCATTCAAGAATGACATTGAGTTGGACGAATCTTCCCTCATCCGTATGATTGAATATGTTATTTTAACGATGAAGAGTGCCGCACTGCACAATATGTCAATAGAAAAATACAGTTTCAAAACACATAGCTACAATTATGATAGGATGAGATGGTTATTAGTAGGATTGCATGGAAAGCTCAGATACCATTTTTTTGAGTGCAAACTTATAAGTAGCGAAGCACTCTATTTAGGGGAAAGGATCAAATCATTTTAG 1827 0.3629 MGIAYAGGIPLALKVLGSHLYSREPIFWESELKHLENNVESLSKIEKVLKRSYDGLTIREKEIFLDIVFFYNNVNKGFCMRILDACGFDALSGIKLLEDKALVTISRSYTIQMHDLLKKLALQIVRYQKYCIPRSPEERSRLRDTEEVRDVFKSSEKTPVEGIQFDLSQDVKLDVQVDTFSKMKELRFLRLNVPRGKKRSTTVKIPEDLMPFPDKLRYLEWNGYPLRTLPQPFGSERLLEIHLQNSDVEYLWHGKQKLVNLKGMNLRECKKLIKLPDLSGASKLKWLHLSGCESLCEVNPSVFSNDTLVALMLDRCIKLPNLISVKHLTSLEKIDVYGCSSLKVFSLSSDSIERLNLSNTGTEVLHSSIGGMRKLLSLNLEGLRLQNLPNELSCLRSLTDLRLSDCDLVTKSKLETVFDVELRSLKILYSKECGNLLELPTNIYSLSSLYELKLDGSNVEMLPVSIECLSELYILSIKTCRKLRSLPKLPPHVKELHADNCTSLLKVSTLKTFSESMNGENKYISFKNDIELDESSLIRMIEYVILTMKSAALHNMSIEKYSFKTHSYNYDRMRWLLVGLHGKLRYHFFECKLISSEALYLGERIKSF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00521 608 PRINTS Disease resistance protein signature 326 342 - -
Tsu08g00521 608 PRINTS Disease resistance protein signature 6 20 - -
Tsu08g00521 608 SUPERFAMILY L domain-like 165 504 - -
Tsu08g00521 608 Gene3D - 3 57 IPR042197 -
Tsu08g00521 608 Gene3D Ribonuclease Inhibitor 349 524 IPR032675 -
Tsu08g00521 608 Gene3D Ribonuclease Inhibitor 134 348 IPR032675 -
Tsu08g00521 608 SUPERFAMILY "Winged helix" DNA-binding domain 43 128 IPR036390 -
Tsu08g00521 608 Coils Coil 32 52 - -
Tsu08g00521 608 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 556 IPR044974 GO:0006952
Tsu08g00521 608 PANTHER NB-ARC DOMAIN PROTEIN 5 556 - -
Tsu08g00521 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00521 Tsu-Chr8 5403794 5406269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00521 3 452 WRKY Transcription Factor Family AT4G12020 33.405 3.46e-51 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00521 - - cam:101488696 813.913