Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00516 ATGTCTTCTTCTACCTCTCAGAAAAAGTACGATGTATTCATTAGCTTCAGAGGCGAAGACACGCGCGAAACATTCACAAGCCATCTTCATTATGCTCTCTGCAAGGAAAACATCATAATATATATCGATGATAATCTTGTTAAGGGAGATGAAATTGGTCCAGCACTTGCTCAAGCAATCCAAGACTCACGCATATCTCTcatcattttctcaaaaaacTATGCTACCTCAAAGTGGTGCTTGAATGAACTCCTTAAAATACTTGAGTGCAGAAAATTTCATGGTCAAGTGGTTATACCTGTGTTCTATAACACAGATCCATCAGATGTACGTAAGCAGACAGGGAGCTTCGGGGAAGCGTTTGCAAAATATGAGGGAGAAGCCATCAACAATGAATCCTTTACAAACACTGTTTTTAAGTGGAGAACTGCTCTCGCTGAAGTCACTAATATACCTGGATGGGACTCTCAAAGTCGTACATATAAGGATGATTCTCATGTCATTCAGAGCATTGTGAATGATGTTTGGCAAAAGCTAGCCTTAATGTATCCTAATGAACTTAAAGGTGTCGTTCATAATGATGAACACAGTGAAAATGTTGAATCACTGCTGAAAGAATATCAAAGAATTGGAATTTGGGGCATGGGTGGAATAGGGAAGACAACCATAGCCAGACAAATGTTTGCCGAGCACTTAGCACAATATGACAGCGCTTGCTTTTTGGAAAATGTAAGTGAAGAAGTTGAAACGTTAGGACTCAGGTACATCCGTAATAAGCTTTTTAGTCAGCTGCTAAAGCGACAAATTACTGAATCAGATAATCTCGGAGCCACATTCATTGAGAGGATGCTCAGTGGTAGAAACGTTTTCGTTGTACTTGATAACGTGGGTAATGCTGCACAATTAGAATATTTGTGCAAAGAACTTGATGACCTTGGGCCAAACAGTAGAGTCATTATCACAGCTAGAGACAGGCACACTCTTAGGGGAAGAGTTGATGTGATACACGAGATCACAAAATGGAAGTTTGAAGAATCTTTGAGGCTTTTTAGCTTAGGAGCTTTCAAACAAAACCATCCTAAAGAGGGTTACAAGCTTCTATCGCAAAGGGTGGTTGCATATGCAGGAGGTGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTTATTCTAGAAGTCCTGTATTCTGGGAACCTGAATTGAAAAATTTGGAGAACAAGGGGGAATCCTTACATGGAATTCAAGAAGTGTTAAAAGTGAGCTATAATGGATTAACAGTCCGAGAAAAGGAAATGTTTCTTGATATTGCATTCTTTTTCAAAGATGAAGAAAGAGATTTGGTGAAGAGAATACTAGATGCCTGTGGTTTCAATGCTACCAGTGGAATAGATATGCTTGAAGATAAAGCACTTATCACTACTTCATATGGCAGTAAAATACAAATGCATGACTTACTACAAAAAATGGCTTTTGATATAGTTCGGCAAAAGAAAAACCGCACTAGCAGAGACCCAGGAAAACGCAGCCGGTTAAGAGATATTGATGAAGTTTGTGatgtatttaaaaataacaagGGGACACATAAAGTTGAAGGCAtaatgtttgatttgtctcaaaAGGGAGATTTGCATGTTCGGGCTGACACGTTCAACAAGATGACTAAGTTAAAGTTTCTAAGATTGTATGTCCCGTGGAGAAAGAAGAGATTGGCTACCGTATATCATCCTGAAGATATGTTACCATTTTCTGGTAAATTGATATATCTTGAGTGGAATGGATATCCCTTGAAGTCTCTTCCACACCCTTTTTGTGCGGAGCTACTTGTTGAGATTCGCTTGCCGCATAGCAATGTAGAATATCTTTGGCACGGGATACagGAACTTGTGAATTTAGAGATAATCCACCTAAGGGaaagcaaacaattgacgaagCTCCCTGATTTGTCCAGGGCCACAAAACTGAAAAGGTTGAATCTCTCAGGTTGTGAGAGTTTACGTGAAGTTCATCTATCTATGGACACACTTGTTTCTTTGCTTGTAGATAGGTGCAAAAATTTGGAGAGTCTTGTTAGTGAGAAGCATTTAACATCTCTATGGATGATCGATATCAATGGCTGCTCAAGTCTTAGGGAATTTTCGTTGTCCTGGGATTTGATTGAAGAGTTGAATTTAAGTAATACAAGTATTGAAATACTGCACTCATCCATTGGTCGTCTGAGCAATCTTAGGACACTCGATTTACAAGGTTTAAGACTTAAGAATCTTCCGAAAGAAATGTCTTGCTTGAAGTCACTTACTAAGCTTGAGATTTCAAATTGCAACATAGTAACCAAGTCAGAGTTAGAAGCCATATTTGATGGTCTAGAATCATTAGAAAGACTATATTTGAAAGATTGTGGTAACTTGCTTGAACTCCCCATGAACATCGATTCCTTGTCATCATTGTATGAATTAAGACTTGATGGAAGCAATGTGATGATGTTGCCTACAAGTATTAAGAATCTTTCAAGCTTAGAAATTTTGTCCTTGAACAATTGCAAGAAGCTTGGTTGTTTGCCGGAGCTTCCACCACACATCAGAGAGTTTAAAGCTGAGAACTGCATCTCATTGGCGAAAGTTTCGAGTTTGAAGGCTCTTTCACAAAGTATGATGGGAGAGCAAAAGTACATTTCATTCAAGAATAGCATGAAATTGGATGCACCTTCATTCGACCGCATTATGGAAGATGTCTTATTAGCAATGAAGAGTGCCGCATTTCACAATACTATTGTAGTTTTTGATTCTGACTGCGATGTTTATAACTCTACTCATGTCTGTTTACCGGGACACAGAGTTCCCAGGCAGTTCAAATTCCGAACAAAAGCTTCATCCTCCTCCATTACTATTGAATTTCCTCACCCTTCCAAATATTTTGGGCTCATTTTCTCGGTTGTTGTTTCCTCATCCTATAGAATGAAGGAGTATCATAATGCTTATATCCAATGCCAATACTATTCGAAAGATGGCAGCCAAAAGTTTTCAATTTGTCCGATTATGCGGAATCGGGAAATTACAAATTTGAGTTTGGATCATATTTTTCTGTGGTTAAGTCCACTCAGCTGTGTCTTTGATAACAAAACGGTATTTGAATTCTGTGTTATAACTGATAGCTGGGAACATGATGACGCTTATAGTTTGGAAGAGTGTGGGATCTGTCCAATTTATTACTCAGAATTACCAACGATTGCAGCCTCCGTGAATTTAAGTAGGGACTTAGAAAGTGTAATTGCATCGGAATTGTCAGAGATGTTTGGATCAGATTTGAATGAATCAATGCAATTTGAGTCTGAATCAATTGAAAGATATGTTGACCATGATGACAATGAGAGGGAATTAGGCAATGAGATTGATGAGTCAATTGAAATATGTGATGAGAAGGAAAGCACTTGCATACAGAAGAACCAACAAGATTCGGACTTGAACGAAAAATGTAGCTATTCATCATATGACAGCTTAATGGATCTTGCATTCTGGGAATGTCAATTGAGTTATTTGATGAACAAAGGAGAATGCTTTGATAAAATTCAAGAAGTGCTACAAGTGAGCTATAATGGATTATCAAATCAAGAGAGGACAATATTTCTAGATATTGCATTCTTTTTTGAAGGTGAAGATAAAGATTTTGCCAAGAAGATACTAGATGCATGTGGTTTCGGCGCTACAAGTGGGATACAACTACTTGAAGAAAAAGCTCTCATAACAATTTCAAATAGCAATAGAATACAAATGCATGACTTACTGCAAAAAATGGCTTTTAGTATAGTTGGTAATGACCAAAGATTAAAGTATAGCCGATTGAGGGATATTGAAGAAATTCGTAATGTACTTAAAAATAACAGGAGGGCTGATGTTGTTGAAGGCATACTATTTGATGTGTCTCAAAAAGAAAAGTTATATGTTAGAGCTGACACATTCAGCATGATGGATGATCTAAGATTTCTTAGATTATATGCCCCCTTAGGTAAGAAGAGATTGACCACCTTGTCTCATTCAGATCAAGGCATTATGCAATTTTCTGATAAACTTAGATACTTTGAGTGGAATGGATACCTTCTGAAGTCTCTTCCAGATCCTTTTTGTGCCAAGTTTCTTGTTGAGATTCGCTTGCCACATAGCAATGTAGAATATCTCTGGCACGGGTTGCAGGAACTTATGAATTTAGAGGCAATCGACCTAACTGAGTGCAAACATTTGATCAACCTCCCAGATTTGTCTCAGGCATCGAAACTTAAATGGTTGTACCTTTCAGGCTGTGAAAGTTTGTGCGAAATTCAACCTTCCATTTTTTCTAAGGACACACTTGTTACTTTGATACTTGATAGGTGTACAAAACTAAAAAGACTAAAGAGTGAGAACCACTTAAGATCTCTGCAGAAGATCAGTGTCTATGGCTGCTCAAGCCTTAAGGAATTTTCCTTGTCCTCAGATTCAATTGAGAGTTTGGATTTAAGCAATACAGGAGTTGAAATATTGCACTCATCAATAAGTGGTATGAGCAAGCTTGTGTGGCTCAATTTAGAAGGTTTGAAACTCTCGAGTCTACCAAATGAGCTGTCTTGTCTGAAATCACTTACGGAGCTTCAACTTTCTGACTGTGATATAGTAACTAAATCGAAGTTAGAAGGCATATTCGATGGTTTAGGATCATTGAGAATACTATATTTGAAACATTGTGGCAATTTGCTTGAACTCCCTACAAACATCAGTTCTTTATCATCGGTGTATGAGTTAAGACTAGATGGAAGTAGTGTGGAGATGCTACCTTCAAGCATAAAGTTTCTCTCTAAGTTAGAGATTTTATGCTTAGACAATTGCGTAAAGCTTCATTCTCTCCCAGAGCTTCCGCTAGAAATCAAGGAGTTTCATGCTGAAAACTGCACTTCATTGATTACTGTATCCAATTTGAAGAGTTTTTCAGAAAAGATGAAAGGAAAGGAGAAATACATTTCGTTCAAGAATGACATGATGATGAATTCGAATCAACCTTCATTTCATCGGGTTGTGGAAGATGTCATAAACCATTCAGCAGAAAATGCATAA 5079 0.3729 MSSSTSQKKYDVFISFRGEDTRETFTSHLHYALCKENIIIYIDDNLVKGDEIGPALAQAIQDSRISLIIFSKNYATSKWCLNELLKILECRKFHGQVVIPVFYNTDPSDVRKQTGSFGEAFAKYEGEAINNESFTNTVFKWRTALAEVTNIPGWDSQSRTYKDDSHVIQSIVNDVWQKLALMYPNELKGVVHNDEHSENVESLLKEYQRIGIWGMGGIGKTTIARQMFAEHLAQYDSACFLENVSEEVETLGLRYIRNKLFSQLLKRQITESDNLGATFIERMLSGRNVFVVLDNVGNAAQLEYLCKELDDLGPNSRVIITARDRHTLRGRVDVIHEITKWKFEESLRLFSLGAFKQNHPKEGYKLLSQRVVAYAGGVPLALKVLGSHFYSRSPVFWEPELKNLENKGESLHGIQEVLKVSYNGLTVREKEMFLDIAFFFKDEERDLVKRILDACGFNATSGIDMLEDKALITTSYGSKIQMHDLLQKMAFDIVRQKKNRTSRDPGKRSRLRDIDEVCDVFKNNKGTHKVEGIMFDLSQKGDLHVRADTFNKMTKLKFLRLYVPWRKKRLATVYHPEDMLPFSGKLIYLEWNGYPLKSLPHPFCAELLVEIRLPHSNVEYLWHGIQELVNLEIIHLRESKQLTKLPDLSRATKLKRLNLSGCESLREVHLSMDTLVSLLVDRCKNLESLVSEKHLTSLWMIDINGCSSLREFSLSWDLIEELNLSNTSIEILHSSIGRLSNLRTLDLQGLRLKNLPKEMSCLKSLTKLEISNCNIVTKSELEAIFDGLESLERLYLKDCGNLLELPMNIDSLSSLYELRLDGSNVMMLPTSIKNLSSLEILSLNNCKKLGCLPELPPHIREFKAENCISLAKVSSLKALSQSMMGEQKYISFKNSMKLDAPSFDRIMEDVLLAMKSAAFHNTIVVFDSDCDVYNSTHVCLPGHRVPRQFKFRTKASSSSITIEFPHPSKYFGLIFSVVVSSSYRMKEYHNAYIQCQYYSKDGSQKFSICPIMRNREITNLSLDHIFLWLSPLSCVFDNKTVFEFCVITDSWEHDDAYSLEECGICPIYYSELPTIAASVNLSRDLESVIASELSEMFGSDLNESMQFESESIERYVDHDDNERELGNEIDESIEICDEKESTCIQKNQQDSDLNEKCSYSSYDSLMDLAFWECQLSYLMNKGECFDKIQEVLQVSYNGLSNQERTIFLDIAFFFEGEDKDFAKKILDACGFGATSGIQLLEEKALITISNSNRIQMHDLLQKMAFSIVGNDQRLKYSRLRDIEEIRNVLKNNRRADVVEGILFDVSQKEKLYVRADTFSMMDDLRFLRLYAPLGKKRLTTLSHSDQGIMQFSDKLRYFEWNGYLLKSLPDPFCAKFLVEIRLPHSNVEYLWHGLQELMNLEAIDLTECKHLINLPDLSQASKLKWLYLSGCESLCEIQPSIFSKDTLVTLILDRCTKLKRLKSENHLRSLQKISVYGCSSLKEFSLSSDSIESLDLSNTGVEILHSSISGMSKLVWLNLEGLKLSSLPNELSCLKSLTELQLSDCDIVTKSKLEGIFDGLGSLRILYLKHCGNLLELPTNISSLSSVYELRLDGSSVEMLPSSIKFLSKLEILCLDNCVKLHSLPELPLEIKEFHAENCTSLITVSNLKSFSEKMKGKEKYISFKNDMMMNSNQPSFHRVVEDVINHSAENA 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00516 1692 SMART till_3 9 151 IPR000157 GO:0007165
Tsu08g00516 1692 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 968 IPR044974 GO:0006952
Tsu08g00516 1692 SUPERFAMILY L domain-like 1256 1643 - -
Tsu08g00516 1692 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 154 IPR035897 -
Tsu08g00516 1692 Gene3D Ribonuclease Inhibitor 534 715 IPR032675 -
Tsu08g00516 1692 Gene3D Ribonuclease Inhibitor 716 890 IPR032675 -
Tsu08g00516 1692 Gene3D Ribonuclease Inhibitor 1490 1663 IPR032675 -
Tsu08g00516 1692 Gene3D Ribonuclease Inhibitor 1315 1489 IPR032675 -
Tsu08g00516 1692 SUPERFAMILY "Winged helix" DNA-binding domain 414 498 IPR036390 -
Tsu08g00516 1692 Pfam TIR domain 9 185 IPR000157 GO:0007165
Tsu08g00516 1692 Gene3D - 179 335 IPR027417 -
Tsu08g00516 1692 PANTHER NB-ARC DOMAIN PROTEIN 8 968 - -
Tsu08g00516 1692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 436 IPR027417 -
Tsu08g00516 1692 PANTHER NB-ARC DOMAIN PROTEIN 1165 1684 - -
Tsu08g00516 1692 ProSiteProfiles TIR domain profile. 8 179 IPR000157 GO:0007165
Tsu08g00516 1692 Pfam NB-ARC domain 204 408 IPR002182 GO:0043531
Tsu08g00516 1692 Gene3D - 342 426 IPR042197 -
Tsu08g00516 1692 SUPERFAMILY "Winged helix" DNA-binding domain 1186 1274 IPR036390 -
Tsu08g00516 1692 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1165 1684 IPR044974 GO:0006952
Tsu08g00516 1692 Gene3D - 3 178 IPR035897 -
Tsu08g00516 1692 PRINTS Disease resistance protein signature 283 297 - -
Tsu08g00516 1692 PRINTS Disease resistance protein signature 375 389 - -
Tsu08g00516 1692 PRINTS Disease resistance protein signature 833 849 - -
Tsu08g00516 1692 PRINTS Disease resistance protein signature 209 224 - -
Tsu08g00516 1692 SUPERFAMILY L domain-like 534 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00516 Tsu-Chr8 5347334 5364722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00516 5 818 WRKY Transcription Factor Family AT4G12020 32.139 1.42e-91 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00516 - - mtr:MTR_8g017800 2205.25