Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00514 ATGCATGACTTACTACAGAAAATGGCTTTTGATATAGTTCGGCAAAAGAAAAACCGCACTAGCAGAGACCCAGGAAAACGCAGCCGGTTAAGAGATATTGAGGAAGTTTGTGatgtatttaaaaataacaagGGGACACATAAAATTGAAGGCAtaatgtttgatttgtctcaaaAGGGAGATTTGCATGTTCGGGCTGACACATTCAACAAGATGATTAAGTTAAAGTTTCTAAGATTGTATGTCCCTTTGAGAACGAAGAGATTGGCTACCGTATATTATCCTGAAGATATGTTGCCATTTTCTGGTAAATTGATATATCTTGAGTGGAATGGATGTCCCTTGAAGTCTCTTCCACACCCTTTTTGTGTGGAATTACTTGTTGAGATTCACTTGCAGCACAGCAATGTAGAATATCTTTGGCACGGGAGGCAGGAACTTCTAAATTTAGAGCTAATCAACCTAAGTGAAAGCAAACAATTGATGGAGCTCCCTGATTTGTCTGGGACCACAAAACTGAAGAAGTTGTATCTCTCAGGTTGTGAGAGTTTACGTGAAGTTCATCCATCTGTTTTTTCCAAGGACACGCTTGTTATTTTGCTTGTAGATAGGTGCAAAAATTTGGAGAGTCTTGTTAGTGAGAAGCATTTAACATCTCTACAGGTGATCAGTATCAGTGGCTGCTCAAGTCTTAGGGAATTTTCGTTGTCCGGGGATTCGATTAAAGAGTTGAATTTAAGCAATATAGATATTGAACTACTGCACGCATCCATCAGTCATCTGAGCAATCatgatttacttattttaagACATAAGAATCTTCCGAAAGCAATGTCTTCCTTGAGATCAATGACTAAGCTTGagctttcaaatttcaatatgattaCTAAGTCAATGTTAGAAGCCTTATTTGATGGTCTAGAATCATCAGAAAGACTAAATTTGACAGATTCAAAACACTGGTGGCAATGGTGTAGCAGTCCGGAATGTCCGGAAGAAGAGTTCCGGAGATTTTTTCATATGAACAAAGCAACGTTCGAGTTTATTTGCAACGAACTCGATTCATCTGTTGTGAAGAAAAACACCATGCTCCGTGAAGCAATTCCGGTACGGCAACGTGTGGCGGTTTGTATCTGGAGACTTGCCACTGGTGATGCTCTTAGAATCATTTCTAAACGATTCGGTTTGGGTATATCCACGTGTCATAAGCTCGTTCTTGAGATTTGTTCTGCAATTAAAAAAGTTCTTATGCCGAAATTTGTTTCTTGGCCGgatgagaataaaatgaatttaattaaaCTAGAGTTTGAGGGTGTTTCTGGAATACCAAATGTTGGTGGTTCAATGTATACTACTCATATTCCAATAATCGCACCTAAGTTGAACGCGAATTCTTATTTCAATACGAGACATACTCAGAGGAATCAGAATACTTCTTACTCTGTTATTATTCAAGGTGTGGTTGATACTAAAGGAATTTTCACTGATGTTTCTATTGGTTGGCCTGGTTCTTATCCTGATGATCAAGTTTTTGAGAAATCGATGATGTATCAGAGAGTTATTAGAGGAAATTTGAAAGATGTTTGGGTTGTTGGGAACTCTGGATTTCCTTTAATGGATGGAGTTTTAGTACCTTATACTCATCAGGATCTTACTTGGGCGCAACACGCGTTTAATGAGAAAGTTGGTGATATTCAGAAACTATGTAAGGATGCATTTGCAAAGGTGAAAGGAAGATGGTCTTGTTTGCAGAAGAGGACAGAGGTGAAGATTGAGGATTTGCCTGGTGTTCTTGGTGCTTGTTGTATTTTGCATAATATTTGTGAGATGAGGAATGAGAAGATGGATCCTGAATGGAATTTTGAACTTTTTGATGATGAGATGGTGGCTGAGAATGGTGTTAGATCTGTTGCTGCTGTTCAAGCTAGAGACAATATTGCTATTGATTTATTACACCGTGGCTGTGCTGGCGATACTTCTACTATACAGCCTAAGAAAAAGAGATGCTGTGCAAATGTCTAA 2022 0.3724 MHDLLQKMAFDIVRQKKNRTSRDPGKRSRLRDIEEVCDVFKNNKGTHKIEGIMFDLSQKGDLHVRADTFNKMIKLKFLRLYVPLRTKRLATVYYPEDMLPFSGKLIYLEWNGCPLKSLPHPFCVELLVEIHLQHSNVEYLWHGRQELLNLELINLSESKQLMELPDLSGTTKLKKLYLSGCESLREVHPSVFSKDTLVILLVDRCKNLESLVSEKHLTSLQVISISGCSSLREFSLSGDSIKELNLSNIDIELLHASISHLSNHDLLILRHKNLPKAMSSLRSMTKLELSNFNMITKSMLEALFDGLESSERLNLTDSKHWWQWCSSPECPEEEFRRFFHMNKATFEFICNELDSSVVKKNTMLREAIPVRQRVAVCIWRLATGDALRIISKRFGLGISTCHKLVLEICSAIKKVLMPKFVSWPDENKMNLIKLEFEGVSGIPNVGGSMYTTHIPIIAPKLNANSYFNTRHTQRNQNTSYSVIIQGVVDTKGIFTDVSIGWPGSYPDDQVFEKSMMYQRVIRGNLKDVWVVGNSGFPLMDGVLVPYTHQDLTWAQHAFNEKVGDIQKLCKDAFAKVKGRWSCLQKRTEVKIEDLPGVLGACCILHNICEMRNEKMDPEWNFELFDDEMVAENGVRSVAAVQARDNIAIDLLHRGCAGDTSTIQPKKKRCCANV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00514 673 PANTHER UNCHARACTERIZED 318 658 IPR045249 -
Tsu08g00514 673 SUPERFAMILY L domain-like 53 320 - -
Tsu08g00514 673 Gene3D Ribonuclease Inhibitor 7 332 IPR032675 -
Tsu08g00514 673 Pfam DDE superfamily endonuclease 450 606 IPR027806 -
Tsu08g00514 673 PANTHER NUCLEASE 318 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00514 Tsu-Chr8 5340810 5343091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00514 1 291 WRKY Transcription Factor Family AT4G12020 35.197 9.11e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00514 - - ahf:112723660 551.592