Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g00486 | atGGCTTCTTCATCCTCTCATGCTGTGACTACAGTGTCTctgaaaaaatatgatgttttCATCAGTTTTAGAGGCGAGGACACTCGATCTAGTTTCACAAGCCATCTTCACGCTGCCTTGAAGCGAAGATATTTGGAGACATACATAGACTACAGGATTGAAAAAGGAAACCAAGTTTGGGCTGAACTTGAGAAAGCAATCAAAGATTCAACTCTGTTTCTTGTTGTGTTCTCAGAGAACTATGCAAATTCAACGTGGTGTTTGAATGAACTTGTTGAAATAATGGAATGCCACAAAAATGAACAAGGTGTTGTGGTTATTCCTGTGTTCTACCGAATTGACCCTTCACACGTTCGGAAGCAGACCGGGAGTTACGGCACAGCGTTGGCAAAACACAAGAAGCGAGGCAAGATTGATGATAAGATGATGCACAATTGGAAGAATGCTCTTTTTCAAGCAGCTAATTTATCCGGTTTTCATTCTACTACAAACGGGACCGAATCTGATTTGATCGAAGAGATTACTCGAGATGTATTAGGAAAGTTAAACCGCAATTACCCAAATGAGCTTAGATGTAATTTTATATTGGATGAAAACTACAGGAAAGTTCAGTCTTTCATAAAACAAATTGATTCATCAGAAGTTCAAATCATTGGACTTTGGGGCATGGGGGGCATAGGAAAGACAACACTTGCTACTGTTATCTTTCAGAAACTCTCTTTTCAGTATGAAGGCAGCTGTTTCTTAGAAAATGTGACTGAAGTTTCAAAAACGCATGGAATCAATTATACCTGCAACAAACTTCTCTCCAAGTTACTAAAGGAAGATTTTGATATTGATACTTCTAAATTAATACCATCCATGATCATTGAAAGACTCAAGCGCATGAAATCTTTCATTGTATTAGATGATGTACATACTTCAGAACTTCTGCAAAACTTGATTGGAGTGGGACATGGTTGGCTAGGATCTGGTAGCACGGTCATTGTGACGACAAGGGATAAGCATGTTCTAATAAGTGGAGGAATTGAAAAAATTCATCAAGTTAAGAAGATGAACTCCCAAAACTCTCTCCAACTTTTTAGCTTGAATGCATTTGGCAAAGTCTTGCCTAAGGAGGAATATGTGGAGCTATCAGAAAGAGCAATTGGTTATGCCGATGGCAACCCTTTAGCTCTAGAAGTATTAGGATCATTTCTTCGTTGCAAAAGTGAAATAGAATGGAAATGTGCACTAGCTAAATTGAAGGAAATTCCCAATGCCAAAATTGATAGGATCTTGAAATGGAGTTATGATGAATTGGATGATAAAGAGAAAAACATATTTCTGGACATTGCATTCGTTTTCAAAGGTTATAGACGGGATAaggtaacaaaaatattaaataagtgtgGTTTTTTTGCAGATATAGGGATAAGCCGTCTTTTAGACATGACTCTTATAAGAATTGACTTTGAAAATTGCATACAAATGCACGATTTAATACAAGCAATGGGAAAACAAATTGTTTTCGAAGAATCTCCTAAAAATCCTGGACAACGCAGTAGATTATGTGATCCCAAGGAAGTTTGTGACGTATTGAAAAATAATAGCGTAACAGATATTGTTGAAGTTATAGTTATAGATGCtaatgaaaatacaaaaatcaatttaagCCCCAAAGCATTTAAAAAGATGGTAAACCTAAGGTTACTTGCTTTTCGAAACCATGGGGGAATCAAATCAGTAAGCCTTCCTCGTGGTCTTGACTTATTGCCAGAGAATTTGAGATATTTTTTGTGGGACGGATATCCATTAAAGTCTCTGCCTCCAACTTTTTGTCCTGAAATGCTTGTAGAGCTTTCCCTGCAAGATAGCCTCGTAGAAAAACTTTGGAATGGAGAAATGGCGAATTTGCCGAATTTAGAGATACTTGACCTTGCTGGCTCCAAAAAGTTGATAGAGTGTCCAAATGTGTCTGGTTCCCCGAATCTACAATATATAAGACTTGATTATTGTGAAAGCATGCCTGAAGTTGATTCATCCATTTTCCTTCTCCAAAAGCTTGTAAGTTTAAGCATGTATGAATGTAAGTCAGTTAAGAGCCTTTCTAGTAACACTTGTTCGCCAGCACTAGTTGAATTAATTGCTACCGGTTGCATCAATCTCCGAGAGTTCTCAATCTCATTTGCTTCCACTAAACATTTGAATTTGGGTATATCAAATTGGGATGGGAATGAACTTCCATCAtcaatattgaataaaaaaaatcttgaaagcTTCTTCTTTCCTCTGATTGAATGTCTTATGGATCTTCCTGAAAACTTTGCCGAACGTATTTGCCTTGCGACTCCATTGAATCATGAACTTGACCCTTCCATCACCTTACATAAAGTACTTCCTAGTCCCGCCTTCATAACTTTAAAACACTTGCTCATTTCTGATATCCCTACGTTGTCTGACATCCCAGACAATATCTCCTTACTATCATCATTAGAGTCTTTAACACTAATTGATATTGGTATTAGAAGCTTGCCTGAAACCATTAAGTATCTTCCCCAACTCTTTGAACTTAGTGTTTTTAACTGTGAAATGCTTCAATCTACTCCGGCGCTTTCACAGTTCATTCAATATTTCATTGTCTCAAATTGTGAATCTCTTGAGACAGTGTTGAGTTCAATGGGGGAACCTTATGACAAACCCATTCCTTGTACTGTTCTCCTTAATTGCAAAAATTTGGATTCTCATTCTTACCATACAGTTCTGAAAGATGTTATTTCTGGGATTGAACTTGGAGCAAGACTAAATTCAGCAAATGAAGAAGGTGATGATACCATTCAGTACCTGTTACCTGCTATGCAAGGCATAGAATATTGTTCCCATTACAGTTCTACACAAGTCTCTTTCACTCTTGAGCTTCCTCCAAATTTGTTCGGTTTCGCCTACTACTTTGTTCTTTCTCAAGGCCATGTGGGAGAAGGTGTAGGTTTTGGATGTGACTGCTACTTGGACGACATTTCAGGTGAAAGGATCTGTATAACAAGAGAAAACATCTTCAAATTTCGCTGGCAGTGTGATGAGCGTATAATCCTCTTGAACTCAGATCATGTGGTTTTATGGTATGATCCAGTAAGCTGCAAGAAGATAATGGAAGAAATAAAAGCCATTAATGATGTAAACAACACCAGTTACAATCCAAAGCTTACATTTAGATTCTTTATTGATGAAAATGTATGTGATGAGGTAGTGATACAAGAATGTGGGTTTCTCTGGATATATCAAGAAGAAATGGTTTCTGCAACAATTTTTGAATCCCGTGATCAAGAAGAAACTGTGTCTCCGTCAGATTTGCAATCCAATTATCAAGAAGAAGCAGTTCCTCCA | 3363 | 0.3669 | MASSSSHAVTTVSLKKYDVFISFRGEDTRSSFTSHLHAALKRRYLETYIDYRIEKGNQVWAELEKAIKDSTLFLVVFSENYANSTWCLNELVEIMECHKNEQGVVVIPVFYRIDPSHVRKQTGSYGTALAKHKKRGKIDDKMMHNWKNALFQAANLSGFHSTTNGTESDLIEEITRDVLGKLNRNYPNELRCNFILDENYRKVQSFIKQIDSSEVQIIGLWGMGGIGKTTLATVIFQKLSFQYEGSCFLENVTEVSKTHGINYTCNKLLSKLLKEDFDIDTSKLIPSMIIERLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLISGGIEKIHQVKKMNSQNSLQLFSLNAFGKVLPKEEYVELSERAIGYADGNPLALEVLGSFLRCKSEIEWKCALAKLKEIPNAKIDRILKWSYDELDDKEKNIFLDIAFVFKGYRRDKVTKILNKCGFFADIGISRLLDMTLIRIDFENCIQMHDLIQAMGKQIVFEESPKNPGQRSRLCDPKEVCDVLKNNSVTDIVEVIVIDANENTKINLSPKAFKKMVNLRLLAFRNHGGIKSVSLPRGLDLLPENLRYFLWDGYPLKSLPPTFCPEMLVELSLQDSLVEKLWNGEMANLPNLEILDLAGSKKLIECPNVSGSPNLQYIRLDYCESMPEVDSSIFLLQKLVSLSMYECKSVKSLSSNTCSPALVELIATGCINLREFSISFASTKHLNLGISNWDGNELPSSILNKKNLESFFFPLIECLMDLPENFAERICLATPLNHELDPSITLHKVLPSPAFITLKHLLISDIPTLSDIPDNISLLSSLESLTLIDIGIRSLPETIKYLPQLFELSVFNCEMLQSTPALSQFIQYFIVSNCESLETVLSSMGEPYDKPIPCTVLLNCKNLDSHSYHTVLKDVISGIELGARLNSANEEGDDTIQYLLPAMQGIEYCSHYSSTQVSFTLELPPNLFGFAYYFVLSQGHVGEGVGFGCDCYLDDISGERICITRENIFKFRWQCDERIILLNSDHVVLWYDPVSCKKIMEEIKAINDVNNTSYNPKLTFRFFIDENVCDEVVIQECGFLWIYQEEMVSATIFESRDQEETVSPSDLQSNYQEEAVPP | 1121 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g00486 | 1121 | Gene3D | - | 351 | 435 | IPR042197 | - | |
Tsu08g00486 | 1121 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 159 | IPR035897 | - | |
Tsu08g00486 | 1121 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 11 | 1021 | - | - | |
Tsu08g00486 | 1121 | Pfam | TIR domain | 16 | 189 | IPR000157 | GO:0007165 | |
Tsu08g00486 | 1121 | ProSiteProfiles | TIR domain profile. | 15 | 182 | IPR000157 | GO:0007165 | |
Tsu08g00486 | 1121 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Tsu08g00486 | 1121 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Tsu08g00486 | 1121 | PRINTS | Disease resistance protein signature | 292 | 306 | - | - | |
Tsu08g00486 | 1121 | PRINTS | Disease resistance protein signature | 630 | 646 | - | - | |
Tsu08g00486 | 1121 | Gene3D | Ribonuclease Inhibitor | 475 | 769 | IPR032675 | - | |
Tsu08g00486 | 1121 | Gene3D | - | 12 | 182 | IPR035897 | - | |
Tsu08g00486 | 1121 | SUPERFAMILY | L domain-like | 537 | 886 | - | - | |
Tsu08g00486 | 1121 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 528 | IPR036390 | - | |
Tsu08g00486 | 1121 | MobiDBLite | consensus disorder prediction | 1098 | 1121 | - | - | |
Tsu08g00486 | 1121 | Gene3D | Ribonuclease Inhibitor | 782 | 942 | IPR032675 | - | |
Tsu08g00486 | 1121 | MobiDBLite | consensus disorder prediction | 1098 | 1115 | - | - | |
Tsu08g00486 | 1121 | Pfam | NB-ARC domain | 203 | 432 | IPR002182 | GO:0043531 | |
Tsu08g00486 | 1121 | Gene3D | - | 183 | 342 | IPR027417 | - | |
Tsu08g00486 | 1121 | SMART | till_3 | 16 | 156 | IPR000157 | GO:0007165 | |
Tsu08g00486 | 1121 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 11 | 1021 | IPR044974 | GO:0006952 | |
Tsu08g00486 | 1121 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 185 | 445 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g00486 | Tsu-Chr8 | 4927951 | 4959188 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g00486 | 13 | 851 | WRKY Transcription Factor Family | AT4G12020 | 32.515 | 4.67e-96 | 335 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g00486 | - | - | mtr:MTR_8g018480 | 1567.36 |