Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00480 ATGGGATTGATGATAATTTTTCTGCTATTTAAGCTACATTTTGTTCTCAGTAATCAACAGCTTCATGAATTTGCAGATACCAATCTACCCCATTTCAGAACAAGAAGTCATTTAAGTATTGCAATTCCACCGTCAGTGTCATCTTCTTTTGCTCCTTCAAGTATTGAGCAACCGCCCACCAAGTCATCGTCAAGCGTTCCTACAAGTATTGCACTACCACCTTCCAAGTCACATGACAGAGCTCCTACAAAGATATGGAAACATGGTTTTGAGGATTCTCCAGTAGCACATCATAAGCATCACTATTCCGGAAGAAAGAACCGCCATCCAACTCCAGTGCCGATCACTCCAATCCAGGCTCCTACATACAGCAGTCAAGGACCTTCGAATTTCAAAGCACAACCTCCTTTCTCTTCACCAAAGATCAAGTTTATCCATGGACCTGCACCTGCACCATCACCAGCTTTTCGGTCAAGCCATCTGGATGTGCCGTCTCTTTCACCTAGAATTTCACCTCTAGGTTCATCGTTGAACAAGATTAAGACTCCACCACCGGCATATACATTGGTTCTTCCCCCTCCACCTCCTAATAAAGATTGCTTGTCTATTACGTGCTTAGAGCCATTGACATACACACCTCCTGGATCACCCTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCCGTGTCAGCATTTCAATATACAAGTGTTTTCCTCTGGTTTCAAAGCTAGCTAAGGAAATTGCAGCAAGTGCGTTGCTGAACCATACCCAAGTTCGTATTGTGGGAGCCGATGCAGCTAATCAGCAACTAGAGAAAACCAATATTCTCATAAACTTGGTACCTAAAGGAGTTAAATTTGATGATGCCACAGCATTtttaatatacaaaaaattcTGGCACAGGGAGATTCTAATAGATCATTCCCTCTTTGGTGCTTACGAAGTACTCTATGTTCATTATCAAGGTCTTCCGCCATCTCCACCTTCAATCCCCTCAGGTATCTCTAGTATAGATGATGGGCCAAATCCAGGTCGTGATAACAACGGAATGATGATGAAACCTTTAGGAGTAGCTGTaccaaagaaagagaaagaaaggagCAGCGGAagaatgatttttataattgtaatgTCATCAATTACTGTTTTTGTTCTATTTCTTGGACTGGCTTGGCTTTGTTTGTTGAAATACAGTTCTTGTATTCATCAACATGAACAAGTTTCAGATAGCTTAAAGTCACCGTCTTCAAAACCTTCAAGGGTTGCTGGGCCATTGACAAGTGGGTTCGTATCAGGATCTGGACCGCGATCCTTCAACTCTGGAACAATAGCTTATATAGGGTCTGCCAAGAATTTTACCTTGAATGACTTAGAGAAAGCAACAAATAACTTTGACTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGGGACGTAGCAGTGAAGATTCTCAAAAGAGATGATCAGCGCGGTGGTCGTGAATTCTTGGCAGAAGTTGAAATGCTTAGCCGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAAATTCGTTGCCTAGTGTATGAGCTTGTCCCTAATGGAAGTCTGGAATCCCACTTGCATGGTGCTGACAAGGAAAGTGATCCATTGGATTGGAATTCCCGGATGAAGATTGCTCTTGGTGCAGCTCGAGGATTGGCTTATTTGCATGAAGATTCCAATCCATATGTCATACACCGGGACTTCAAGTCCAGTAACATCTTGTTGGAATATGATTTTACAGCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCACTGGAAGAGGGAAACAAACACATCTCCACACATGTCATGGGTACATTCGGCTACTTAGCTCCTGAATATGCAATGACTGGTCATCTTCTCGTCAAAAGTGATGTTTATAGTTACGGAGTTGTACTCCTTGAGCTTCTTACTGGTAGAAAGCCTGTGGATTTGTCACAACCGCCAGGTCAAGAAAATCTTGTCACATGGGTTCGTCCACTTCTCTCGAGTAACGAAAGTTTGCAGACGATCATCGACCCAATCGTAAAGCCAAGCATATCCATTGATACTGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTATCTCAACGACCTTTCATGGGAGAAGTTGTTCAGGCCTTGCAGCTTGTATGCAGCGAGTTTGAGGACACAAACTATATAGAACCAAGTAACTTTCAAGAAGAGGTTCTTGTGACAAATGTGGAAGGAAAGTTTTTGGACGTTTCGGGTGAGAGAGAGGAGTTTTCAGAGTATCAAAAAACACTTTATGGCTATCAATCTGGCGAAGAAAAGGTAAGATTATCAGCTTCAGAACTACCAAGTACTTCAGGCCAAGAATTTGAGTCATTCAGGAGAAAATCTACTTCAGGGCCTATTTCCACCGAGAAGAAAAGACACTTCTGGCAAAATTTGAGAGGTTTGTCTAAAGGTAGCGCCAGTGAACATGGATTTTCAACTAAACTATGGCATGGATCTCGTTAA 2574 0.413 MGLMIIFLLFKLHFVLSNQQLHEFADTNLPHFRTRSHLSIAIPPSVSSSFAPSSIEQPPTKSSSSVPTSIALPPSKSHDRAPTKIWKHGFEDSPVAHHKHHYSGRKNRHPTPVPITPIQAPTYSSQGPSNFKAQPPFSSPKIKFIHGPAPAPSPAFRSSHLDVPSLSPRISPLGSSLNKIKTPPPAYTLVLPPPPPNKDCLSITCLEPLTYTPPGSPCGCVWPLQVKLRVSISIYKCFPLVSKLAKEIAASALLNHTQVRIVGADAANQQLEKTNILINLVPKGVKFDDATAFLIYKKFWHREILIDHSLFGAYEVLYVHYQGLPPSPPSIPSGISSIDDGPNPGRDNNGMMMKPLGVAVPKKEKERSSGRMIFIIVMSSITVFVLFLGLAWLCLLKYSSCIHQHEQVSDSLKSPSSKPSRVAGPLTSGFVSGSGPRSFNSGTIAYIGSAKNFTLNDLEKATNNFDSSRILGEGGFGLVYKGVLNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQIRCLVYELVPNGSLESHLHGADKESDPLDWNSRMKIALGAARGLAYLHEDSNPYVIHRDFKSSNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLSSNESLQTIIDPIVKPSISIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEDTNYIEPSNFQEEVLVTNVEGKFLDVSGEREEFSEYQKTLYGYQSGEEKVRLSASELPSTSGQEFESFRRKSTSGPISTEKKRHFWQNLRGLSKGSASEHGFSTKLWHGSR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00480 857 MobiDBLite consensus disorder prediction 801 820 - -
Tsu08g00480 857 MobiDBLite consensus disorder prediction 48 72 - -
Tsu08g00480 857 MobiDBLite consensus disorder prediction 48 82 - -
Tsu08g00480 857 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00480 857 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Tsu08g00480 857 PANTHER OS01G0750732 PROTEIN 7 856 - -
Tsu08g00480 857 SUPERFAMILY Protein kinase-like (PK-like) 446 739 IPR011009 -
Tsu08g00480 857 CDD STKc_IRAK 471 739 - -
Tsu08g00480 857 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Tsu08g00480 857 MobiDBLite consensus disorder prediction 801 824 - -
Tsu08g00480 857 Gene3D Transferase(Phosphotransferase) domain 1 541 760 - -
Tsu08g00480 857 PANTHER OS01G0750732 PROTEIN 7 856 - -
Tsu08g00480 857 Gene3D Phosphorylase Kinase; domain 1 439 540 - -
Tsu08g00480 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00480 Tsu-Chr8 4837983 4843005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00480 197 857 Receptor kinase-like Gene Family AT5G56890 57.926 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu08g00480 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00480 - - gmx:100814040 1285.4