Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00469 ATGGACACTATTTGGATTCTGTTTATAACACCAATTTTCTTGTGCAGTTTGATTCTTTGCATAAACAAACTTAGTCACAAGCTCAAATCAAAACACAGAAATCAACTTCCACAAGGCACTCTTGGATGGCCTTTTATTGGTGAAACCATAGAGTTTGTCTCTTGTGCTTACACTGATCGTCCTGAAAATTTCATGAACAAGCGACGCGACATGTATGGTAAGGTGTTCAAGTCACACATATTTGGAAGTCCTACCATTGTTTCAACAGATGCAGAAGTGAACAAGTTTATACTACAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCTAAATCCTTGATGGAGTTAATGGGAGAGTCTTCTATTTTACTCATCAATGGAACCTTACAAAGGAGAATACATGGACTTATTGGAGCTTTTTTCAAGTCTCAACAGTTAAAAGTTCAGATTACCAAAGATATGCAGAAGTATGTTCAAGAATCAATGGAAAATTGGAAAGAGGATCAACCTATATACATACAAGATGAAACAAAAAAGATTGCATTTCATGTACTAGTGAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACttctaaaaaaacattttcaagAATTTATATCTGGCCTAATGTCTTTGCCAATAAACCTACCAGGAACAAAACTTTATCAATCTTTACAGGCAAGCCAATTTATGAGATTGCATTCTTTTACCATATATAGGGCaaATAGAAGAAATAAAAGTATCTTTGAAGTTCCAAAAGATGTAGTGGATGTGCTTCTTAATGATACAAGTGAGAAATTAACAGATAATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGTGAGGATTCAGTTCCAGTTCTTATGACTCTAGCTACAAAGTACTTATCAGAATGCACTGCTGCTTTGCAACAATTGACGGAGGAAAATATAAAGCTCAAGAAACTCAAAGATGAGATTGGGGAGCTTATGTGTTGGAGTGATTACTTATCATTGCCATTTACTCAAAAAGTTATAACAGAAACTTTGAGAATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGTGTGTTTACAAATTTTAGATCAGTTCATTTAGATGAGAAAAACTATGATTCCCCATATCAATTCAATCCATGGAGGTGGCAAGACAAGGACATGAACAGTAACAATTTCACTCCTTTTGGAGGGGGCCAAAGGCTATGTCCTGGCCTTGACTTGGCCAGGTTGGAAGCTTCCATCTTTCTACACCACCTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAGAAGGATGCCTATCTTAGTAAAGAGAGTGTAA 1419 0.3495 MDTIWILFITPIFLCSLILCINKLSHKLKSKHRNQLPQGTLGWPFIGETIEFVSCAYTDRPENFMNKRRDMYGKVFKSHIFGSPTIVSTDAEVNKFILQSDAKVFVPSYPKSLMELMGESSILLINGTLQRRIHGLIGAFFKSQQLKVQITKDMQKYVQESMENWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQASQFMRLHSFTIYRANRRNKSIFEVPKDVVDVLLNDTSEKLTDNLIADNIIDMMIPGEDSVPVLMTLATKYLSECTAALQQLTEENIKLKKLKDEIGELMCWSDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFTNFRSVHLDEKNYDSPYQFNPWRWQDKDMNSNNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVKRV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00469 472 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 21 467 - -
Tsu08g00469 472 Coils Coil 301 328 - -
Tsu08g00469 472 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PANTHER CYTOCHROME P450 26 21 467 - -
Tsu08g00469 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Tsu08g00469 472 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00469 472 SUPERFAMILY Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00469 Tsu-Chr8 4668166 4671531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00469 26 445 Cytochrome P450 AT3G13730 66.274 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00469 K12638 - gmx:100797868 786.563