Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00425 ATGGCGACAGTACCAGGGCCACTCGTATGGGAGATCGTGAAGAAGAACAACTCATTTTTGGTGAAAGAGTTTGGAAATAACACTCAAAGTGTTCAATTCAGCAGAGAGAGTAACAATCTCTACAATCTCAACTCTTACAAGTTCTCTGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAAGATCAGGCTGTGTTGTTGGCTACAACAAAGGCAAGGAAGCAAAACAAGCCTTTTGCTTTGACTCACAAATCGATCATGAAGAAGGAGTTCCGCAGGATGGCAAAGGCTGTTCAAAATCAGGTGGCAGACAACTACTACAGGCCTGATCTGAAGAAGGCAGCTCTTGCAAGGCTCAGTGCAGTTCACAGAAGCCTCAAAGTTGCCAAGTCCGGTGTCAAGAAGAGGAATAGACAAGCTTTGAAGGTCCATGGCAGGAAGTGA 453 0.4503 MATVPGPLVWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSGLANKKTVTIQPAGKDQAVLLATTKARKQNKPFALTHKSIMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQALKVHGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00425 150 Gene3D - 7 133 - -
Tsu08g00425 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Tsu08g00425 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Tsu08g00425 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00425 Tsu-Chr8 4232493 4234470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00425 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.727 2.24e-73 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00425 K02903 - gmx:100499921 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00425 08 4232493 4234470 Tsu08g00425 08 4232493 4234470 ECH