Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00412 ATGGGAATATTACTGCATTTTCTTTTGGTATCACTTACTGTGGTTTTAATACAAGCTCAAGATGATCAATCAGGATTCATTAGCTTAGATTGTGGTCTACCTGAAGAAGTGAGCTATTCTTCGGTGAAGACAGGCATAAATTACATCTCAGATGCCAAATTCATAGATACAGATACAAGTGTAAGTAAGAGGGTAAAAGGCAACATCACTTCTCAACAGGAACTAGAATATGTGAGGAGCTTTCCTAGTGGAGTGAgaaattgttacaaaataaatgtaacaaGTGGTTCTAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATAATCTAAATCAGCCACAACAGTTTGATCTTCTTCTTGGAGCTAATGTTTGGGCTATAGAATTGAGGCCTTTGAACAATTTAAATTACGTCACATACTCGCCTAAATCAGTATTATCAACCTTCAGGCGATACGATTTAGGTAATACAGACTTATACTACAGGTACAAAGATGATGTTTATGACCGCGATTGGTTCCCTTGTGAATTATCCAGTGATTGGAGACGATTAAGCACCCCACTCAACAATGGTGAACTAGTTCAGAATAATTATAAACCACCAGCAATTGTGATGAGCACTGCTGTTACACCAGTAAATGAAAGCGCCCCTTTACAATTTCATTGGGATGCAAATAATGTAAATGACCAATACTACCTCTATTTGCACTATACTGAGGTTGAGAAGTTGGCTGGAAATGAAACTAGAGCATTAAATATCACACTGAATGGAGACTTTTGGTATGGACCTGTGATACCTATATACCGGAAAGCATATACCTTATATAGTAGAGCACCTATGACAGGAGCCACAAGGTATGAAATATCCCTTTCTAAGACAGAGAATTCAACCTTTCCACCCATCCTCAATGCCATTGAGATTTATAAAGCAAAAGACTTCACACAATCAGAAACTAAAATAGAAGATGTTGACGCTATGAAAAACATCAAGAATGTTTATGGGGTGACTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAATTACATATGGGAAGGCTTAAACTGTGGTATTGATAACCAAAACCTCTCAAGTATCATATCCTTGAATTTGTCTTCAAGTGGATTGATAGGACAAATAGAATCTTCCATATCAAAGCTCACTATGTTACAGTGCTTGGATTTATCAAACAATAGCTTAAGCGGTCCCTTACCTGATTTTCTGGTGCAAATGCGGACCCTAAAAACATTAAACTTGGGGAAGAACAACCTTACGGGTGTAGTTCCAAGTGGCCTACTTGAGAGATCAAAAGAAGGTTCACTGTCATTGAGCCTGGATCAAAATCCAAATCTATGTGAATTTGCTTCATGCAACCAAACGACAGGTGATCAAAAAAAGAATGAAACTGATATAATCATTCCTGTTAAGAGCCTGGATCAAAAGACAGGTGATccgaaaaagaagaaaaatataatcattcctATAGTAGCATCATTTGCTGCAATTTTGGTGCTACTAGTAGTCCTAGTAAGTGCGGCAGTTATCATTTGTGGccttaagaaaagaaaaacacaagAAGCTGCGGCTCCAAATGAGTCACAATTGGAATTCAAGCAAAGACAAAATGAGCTACAATTGGATTCCAGACAAAGACAATATACATATGATGAAGTTGACGTGATCACGAACAACTTAAATAGAATTCTTGGTAGAGGTGGATTTGGAACAGTTTATTATGGCCTAATTGATGACACTGAAGTAGCTGTCAAGATGCTTTCTAAATCATCAGTCCAAGGATATCAACAATTTCTAGCAGAGGTTAAGCTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGATATTGCAATGAAGGAAACGATATAGGGCTCATTTATGAATATATGGCAAATGGAAACCTTGATGAACTTCTGTCAGGAAAAAATAGCAGGGCAAAGTTCTTGACTTGGGAAGACAGACTTAGAATAGCAGTGGATGCAGCCCAAGGACTGGAATATCTGCACAATGGTTGTAAGCCACCTATAATCCATAGAGATGTGAAAAGTACaaacattttattaaatgaaaGCTTCCAAGCAAAATTGGCTGATTTTGGCCTATCCAAAAACTTTCCAACTAATGGAGGCACCCATTTGTCTACTATTGTTGCTGGAACTGTAGGTTACCTAGATCATGAGTACATGACATCAAACCGGTTGACAGAGAAAAGTGATGTTTACAGTTTTGGAGTTGTTCTTTTGGAGATAATCACAGGTCAACCAGCCATAATAAAATCACCTGACAAGACTCACATAAGTCTGTGGGTTAGATCCATGCTTTATAATGGGGATATAATGAATATTGTTGACTCAAGTTTACAACAAGATTTTGACACTAACTCTGCTTGGAAAGCTGTTGAGATAGGAATGGCCTGTGTGTCCCTTAATTCTTCTGATAGGCCAAACATGAACGAAGTAGTGAACGAGCTAAAGGAGTGTTTGGCTGCAGAATTATCCCGAAAAAGGACCGGTCGTCGTAAAACTAAAAAGGAAGGTTCAATTGAGTCGGTTCCCCTCAATCTTGCAATTGAACTCGGTCCTCTAGCTAGaaaacaaagagaagaaACACTTGGTTTTAAGCCAACAACAGAAAATGGCCATGATTCTTTATCTGATCTTACTCCTGTTATGAGTAAAGAAATCGGTGAATCTGAGCCTACATTTTCTCATGAAGAGAAATTTGAGAATTTTgaaagtaataataatgatgatctAATTGAAATGCCACAAAGTAATGAGCCATCTAAAGAGAATAAGTTTGAAGCGGGAAACAATATTTGGAAAGGAAAGGTTTTTGCGAGGAAGAACCGCAAACAAAGTGATGAGTCCACATCTCAACAGCGTCATGAATCTAAACCGGGGAATGATCAACCTCCTAAAACTAGAAAATGTAAGTCTATCTCTATTTCTGAGAGTCGTATCATGTATCCCGATATAGATGATCCTATTGCTGTTAGAAAACCCGTTAGATCTTGCACTAAACACCCCTTATCCAATTTcatatcatattcaaatttgtcTTCATCTTTTTCTGCTTTCACCTCAAAACTGTCTATTGTAGAAATTCCAAAAAGTGTACATGTTGCTCTAGAAGTTCCAAAGTGGAGGGAAGCTGTAATGGAGGAGATGAGAGCCCTTGAAAAGAACAAAACCTGGAGTGTTATGACATTACCGGATGGGAAGAAGACGGTTAGATGCAAATGGGTGATTACTGTGAAGTATAATTCCGATGGGTCGATTGAAAGGTATAATGCTCGATTCGTGGCTAAGGGTTTTACTCAGACCTATGTTATAGACTACTCAGAGACACTTGCTCATGTTGCTAAATTGAATACTGTCAGAATTCTCTTATCTCTTGCGGCTAACCTGGATTGGCCCCTACATCAGTTGGATGTTAAAAATGCTTTTCTCAATGGAGATTTAGAAGAAGAAGTATATATGGACATTCCACCTGACTTTGGAGATAGAAACAAGGGTACATTCAAGGACACCTTGTTCACAAAGTTCTCCCAAGATGGAAAAATATCTATCCTGATTGTTTATGTCGATGATATTGTTCTTACTGGAAATGATACAGTTGAAATGGGAAGAGTAAAAGAGAAATTAACAGTAGACTTTGAAATCAAGGACTTGGGATCCATGAGATATTTTCTTGGTATGGAGGTTGCTCGATCAAAGACCATGAATGATAACAAACCTCCTTTTAATCCAGGAGGTGAATTAGCACCATCCAAACTAATACTTTGCCATCCATCATCAATGATAACAAACCTGGTTCGACACCGGCTTTTGAAAATTCATCAAGACCATGAAAAACACCAATAG 3900 0.3674 MGILLHFLLVSLTVVLIQAQDDQSGFISLDCGLPEEVSYSSVKTGINYISDAKFIDTDTSVSKRVKGNITSQQELEYVRSFPSGVRNCYKINVTSGSKYLIRASFYYGNYDNLNQPQQFDLLLGANVWAIELRPLNNLNYVTYSPKSVLSTFRRYDLGNTDLYYRYKDDVYDRDWFPCELSSDWRRLSTPLNNGELVQNNYKPPAIVMSTAVTPVNESAPLQFHWDANNVNDQYYLYLHYTEVEKLAGNETRALNITLNGDFWYGPVIPIYRKAYTLYSRAPMTGATRYEISLSKTENSTFPPILNAIEIYKAKDFTQSETKIEDVDAMKNIKNVYGVTRNWQGDPCGPVNYIWEGLNCGIDNQNLSSIISLNLSSSGLIGQIESSISKLTMLQCLDLSNNSLSGPLPDFLVQMRTLKTLNLGKNNLTGVVPSGLLERSKEGSLSLSLDQNPNLCEFASCNQTTGDQKKNETDIIIPVKSLDQKTGDPKKKKNIIIPIVASFAAILVLLVVLVSAAVIICGLKKRKTQEAAAPNESQLEFKQRQNELQLDSRQRQYTYDEVDVITNNLNRILGRGGFGTVYYGLIDDTEVAVKMLSKSSVQGYQQFLAEVKLLMRVHHKNLTSLIGYCNEGNDIGLIYEYMANGNLDELLSGKNSRAKFLTWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKSTNILLNESFQAKLADFGLSKNFPTNGGTHLSTIVAGTVGYLDHEYMTSNRLTEKSDVYSFGVVLLEIITGQPAIIKSPDKTHISLWVRSMLYNGDIMNIVDSSLQQDFDTNSAWKAVEIGMACVSLNSSDRPNMNEVVNELKECLAAELSRKRTGRRKTKKEGSIESVPLNLAIELGPLARKQREETLGFKPTTENGHDSLSDLTPVMSKEIGESEPTFSHEEKFENFESNNNDDLIEMPQSNEPSKENKFEAGNNIWKGKVFARKNRKQSDESTSQQRHESKPGNDQPPKTRKCKSISISESRIMYPDIDDPIAVRKPVRSCTKHPLSNFISYSNLSSSFSAFTSKLSIVEIPKSVHVALEVPKWREAVMEEMRALEKNKTWSVMTLPDGKKTVRCKWVITVKYNSDGSIERYNARFVAKGFTQTYVIDYSETLAHVAKLNTVRILLSLAANLDWPLHQLDVKNAFLNGDLEEEVYMDIPPDFGDRNKGTFKDTLFTKFSQDGKISILIVYVDDIVLTGNDTVEMGRVKEKLTVDFEIKDLGSMRYFLGMEVARSKTMNDNKPPFNPGGELAPSKLILCHPSSMITNLVRHRLLKIHQDHEKHQ 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00412 1299 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 16 128 - -
Tsu08g00412 1299 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 129 849 - -
Tsu08g00412 1299 Pfam Malectin-like domain 129 312 IPR024788 -
Tsu08g00412 1299 MobiDBLite consensus disorder prediction 924 992 - -
Tsu08g00412 1299 CDD STKc_IRAK 572 837 - -
Tsu08g00412 1299 PANTHER OS07G0107800 PROTEIN-RELATED 16 128 - -
Tsu08g00412 1299 MobiDBLite consensus disorder prediction 926 944 - -
Tsu08g00412 1299 Gene3D Ribonuclease Inhibitor 326 450 IPR032675 -
Tsu08g00412 1299 MobiDBLite consensus disorder prediction 959 984 - -
Tsu08g00412 1299 Gene3D Phosphorylase Kinase; domain 1 553 640 - -
Tsu08g00412 1299 ProSitePatterns Protein kinases ATP-binding region signature. 572 593 IPR017441 GO:0005524
Tsu08g00412 1299 SUPERFAMILY L domain-like 352 436 - -
Tsu08g00412 1299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Tsu08g00412 1299 Pfam Protein tyrosine and serine/threonine kinase 568 835 IPR001245 GO:0004672|GO:0006468
Tsu08g00412 1299 SMART serkin_6 566 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00412 1299 Gene3D Transferase(Phosphotransferase) domain 1 641 860 - -
Tsu08g00412 1299 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1185 1250 IPR013103 -
Tsu08g00412 1299 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1074 1180 IPR013103 -
Tsu08g00412 1299 PANTHER OS07G0107800 PROTEIN-RELATED 129 849 - -
Tsu08g00412 1299 ProSiteProfiles Protein kinase domain profile. 566 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00412 1299 SUPERFAMILY DNA/RNA polymerases 1073 1251 IPR043502 -
Tsu08g00412 1299 SUPERFAMILY Protein kinase-like (PK-like) 550 835 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00412 Tsu-Chr8 4132053 4140810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00412 6 875 Receptor kinase-like Gene Family AT1G51850 45.119 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu08g00412 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00412 - - gmx:100779474 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00412 08 4132053 4140810 Tsu08g00412 08 4132053 4140810 ECH
Tsu02g05397 02 62524665 62529185 Tsu08g00412 08 4132053 4140810 PCT