Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00408 ATGGCAGCACCGGGAGGCGGAATGTTAGACGGAGTACAGACGGCACAACCACCAGGAACAGACATGACCGGAATTTGCTTCCGAGATCAATTATGGCTCAATACTTACCCTCTCGATCGTAACCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCAAACAATGAACAACTTCGAATGCGATCTCAACATCCACTCGATCTCTCTCAACTCTCgAAAATGACGGGTATAGAGTATGTATTGAGTGAAGTAATGGAGCCTCATCTTTTCATTATGAGGAAGCAGAAGAGAGATGGACCTGATAAAATTACTGCAATGCTTGCTTATTACATTTTGGATGGTTCCATTTATCAAGCTCCACAATTATCCAATGTTTTTGCTGCTAGAATTGGAAGGGCACTCTATTATATTGAAAAGGCATTTACTACAGCTGCGTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTCCAATACCGGAACCAAAGGCGGCTAAGGAGACAATTGACGTAAAAGAAATTAAGCGAGTGGATCATATTCTTGCATCCTTGCTACGCAAGCTTCCGCCAGCTCCTGCTCCACCACCATTTCCAGAAGGGTATGTTCCGCCTTCAACAGCCGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAGCTGAGCCACAAGCACCTACTGTTGATCCCATAATTGATCAAGGACCTTcaaaaagaatgaaattttaA 744 0.4274 MAAPGGGMLDGVQTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSQHPLDLSQLSKMTGIEYVLSEVMEPHLFIMRKQKRDGPDKITAMLAYYILDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETPIPEPKAAKETIDVKEIKRVDHILASLLRKLPPAPAPPPFPEGYVPPSTAETEKGPETQEAAEPQAPTVDPIIDQGPSKRMKF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00408 247 PANTHER MED-6-RELATED 16 247 IPR007018 GO:0003712|GO:0006357|GO:0016592
Tsu08g00408 247 MobiDBLite consensus disorder prediction 194 247 - -
Tsu08g00408 247 Pfam MED6 mediator sub complex component 25 150 IPR007018 GO:0003712|GO:0006357|GO:0016592
Tsu08g00408 247 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 16 247 - -
Tsu08g00408 247 MobiDBLite consensus disorder prediction 195 209 - -
Tsu08g00408 247 Gene3D Mediator complex, subunit Med6 19 148 IPR038566 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Tsu08g00408 Med6 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00408 K15128 - gmx:100792248 395.586