Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g00403 | ATGGTGGCAATGTTACTGCATTTTCTTTCAGTATTGCTTGGTGTCCTTACAATTTTGGTTTTGATAGAAGCTCAAGAACCAGGATTCATTAGCTTAGATTGTGGTCTACCCGATGATTCTACCTATTCTGAGAAGAGTACAGGCATAAATTACATATCAGATGCCAAATTCATAGATACTGGTGTAAGTAAGAGGGTACAAGTCAATATTACGGTTAAACAGCAATTAGAATATGTGAGGAGTTTTCCTATTGGAGTGAAAAATTGTTACAGAATAGATGTAACAAATGGTACTAAATATTATATCAGAGCTTCTTTCTTTTATGGTAACTATGATGATTTAAATGATCCACCACAATTTGATCTTACTTTTGGAGCTAACGTTTGGGATACAGTGATATTCACCAATTTATCACGCATCACAACCAGCGAGATCATTTACACTCCATCAAAAGATTACATACAACCATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGCATCTGAACAAAGAAACTTATGTTTCATATTCAGaaaaatcaatattatcacTCTTCTTTCGGTTTGATGTAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCGTCTGGTTACCTTTTCAGTGGAATGAGATGAAACGATTAAGTACCAATGATGATCTATTAACTCAGAATATTTATAAACCACCAGCAATTGTTATGAGCACTGCTGTTACACCAGTAAATGACAGTGCCCCTgtacaatttaattttgatgCAGAAAATGTAAATCAACAAATCTACACATATTTGCACTTTAATGAGGTTGAGAAGCTTGCAGAAAATGAAACTAGAGCATTCAACATCACAGTGAATGGAGAGCTTTTGTATGAATTTGTGGTACCTGTATACCGGTCAGCAGATACCATATTTAGTCCAACACCGTTGACTGGagcaacaaaatatatatttacccTGTCTAAGACAGAGAGTTCAACCCTTCCACCCATCCTTAATGGCGTTGAGgtttataaagtaaaaaacTTCTCACAATCTGAAACTCAACAGGATGATGTTGAGACAATCACAAACATCAAGAATGCTTATGGAGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAAGTATATATGGGAAGGCCTAAACTGTAGTATTGATGATGGCAATAACCCACCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTCACTATGTTACAATACTTGGATTTATCAAACAATAGTTTAAACGGTCCTTTACCGGATTTTCTTACGCAACTGCAATCACTAAAAGTCATAAACGTGGGAAAGAACAACCTCACAGGGTTAGTTCCAAGTGAACTCCTTAAGAGATCAAAAGCAGGTTCACTATCACTGATCATGGAAGATAATCCTGGTCTTTGTACACCAGAATCAtgcaaaaagaaaaggaagaagaagaatttgtCTGTACCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCATAATTTCTCTTGGACTTTGGagattcaaaagaaaaaaagCTATGCCTACGTCTTCAAATTCTAAGAAAAAGGATTCCATGAAATCAAAACATCAAGCATTCAATTACACCGAACTTCTCAATATTACTGATAACTTCAAAACGATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTAGGCTCATTACAAGATCAAACTCGAGTCGCTGTTAAGAGACTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATattgtgatgaagatgaaatCAAAGCATTAATTTATGAATACATGGCAAATGGAAATCTCCATCAACACTTGTCAGTGGAAAATTCAAATATCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATGCCGCAAACGGATTGGATTATCTGCATAACGGATGTAAACCACCTATTATTCATAGAGATTTGAAACCTTCTAACATATTACTAGATGAAAACATGCATGCCAAGATTGCTGATTTTGGTATAAGTAGAGCTTTTGGTAATGATATTGATTCTAATATATCTACCTGCCCTGCCGGTACATTTGGTTACGTTGATCCAGAAGTTCAGAGAACAggaaacacaaataaaaagaatgatgTGTACAGCTTTGGGATAGTTCTATTTGTGTTAATCACTGGTCGTCAAGCAATAGTAAGAGCAGGTGGAGAAAACATTAACATACTTGAATGGGTTATTCCCATAATTGAAAGAGGAGATATTCAAAATGTTGTTGATCCAAGGTTGCAAGGCGAATTCAGTATCAATTCAGCATGGAAAATTGTAGAGATTGCTATGTCATGCATTTCGCCAAATGCAGTTGAAAGACCAGACATGAGCCAAATATTAGCAGAGTTAAAAGAATGTCTATCATTCGACATGGTTCAGAGAAACTATGGAAGCACACGAGCTATGGATGAATTGGTTTCTTTAGCTACTATATCTGAAACCACTGTTTTAGCTAGATAA | 2622 | 0.3429 | MVAMLLHFLSVLLGVLTILVLIEAQEPGFISLDCGLPDDSTYSEKSTGINYISDAKFIDTGVSKRVQVNITVKQQLEYVRSFPIGVKNCYRIDVTNGTKYYIRASFFYGNYDDLNDPPQFDLTFGANVWDTVIFTNLSRITTSEIIYTPSKDYIQPCLVNTGKGTPFISAIELRHLNKETYVSYSEKSILSLFFRFDVGSITNLEYRYKDDVYDRVWLPFQWNEMKRLSTNDDLLTQNIYKPPAIVMSTAVTPVNDSAPVQFNFDAENVNQQIYTYLHFNEVEKLAENETRAFNITVNGELLYEFVVPVYRSADTIFSPTPLTGATKYIFTLSKTESSTLPPILNGVEVYKVKNFSQSETQQDDVETITNIKNAYGVARNWQGDPCGPVKYIWEGLNCSIDDGNNPPRITSLNLSSSGLTGEIASSISNLTMLQYLDLSNNSLNGPLPDFLTQLQSLKVINVGKNNLTGLVPSELLKRSKAGSLSLIMEDNPGLCTPESCKKKRKKKNLSVPLIASFSALIVILIISLGLWRFKRKKAMPTSSNSKKKDSMKSKHQAFNYTELLNITDNFKTIIGEGGFGKVYLGSLQDQTRVAVKRLSPSSVQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEIKALIYEYMANGNLHQHLSVENSNILKWNERLNIAVDAANGLDYLHNGCKPPIIHRDLKPSNILLDENMHAKIADFGISRAFGNDIDSNISTCPAGTFGYVDPEVQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRAGGENINILEWVIPIIERGDIQNVVDPRLQGEFSINSAWKIVEIAMSCISPNAVERPDMSQILAELKECLSFDMVQRNYGSTRAMDELVSLATISETTVLAR | 873 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g00403 | 873 | Gene3D | Ribonuclease Inhibitor | 365 | 485 | IPR032675 | - | |
Tsu08g00403 | 873 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 688 | 700 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu08g00403 | 873 | Pfam | Protein tyrosine and serine/threonine kinase | 570 | 837 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu08g00403 | 873 | SUPERFAMILY | L domain-like | 380 | 479 | - | - | |
Tsu08g00403 | 873 | Gene3D | Transferase(Phosphotransferase) domain 1 | 644 | 856 | - | - | |
Tsu08g00403 | 873 | SMART | serkin_6 | 568 | 841 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu08g00403 | 873 | Gene3D | Phosphorylase Kinase; domain 1 | 540 | 643 | - | - | |
Tsu08g00403 | 873 | CDD | STKc_IRAK | 574 | 839 | - | - | |
Tsu08g00403 | 873 | Pfam | Malectin-like domain | 32 | 352 | IPR024788 | - | |
Tsu08g00403 | 873 | Pfam | Leucine Rich Repeat | 433 | 450 | IPR001611 | GO:0005515 | |
Tsu08g00403 | 873 | ProSitePatterns | Protein kinases ATP-binding region signature. | 574 | 596 | IPR017441 | GO:0005524 | |
Tsu08g00403 | 873 | SUPERFAMILY | Protein kinase-like (PK-like) | 548 | 837 | IPR011009 | - | |
Tsu08g00403 | 873 | PANTHER | LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN | 20 | 870 | - | - | |
Tsu08g00403 | 873 | ProSiteProfiles | Protein kinase domain profile. | 568 | 841 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu08g00403 | 873 | PANTHER | OS07G0107800 PROTEIN-RELATED | 20 | 870 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g00403 | Tsu-Chr8 | 3894941 | 3932252 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g00403 | 15 | 850 | Receptor kinase-like Gene Family | AT1G05700 | 45.205 | 0.0 | 748 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Tsu08g00403 | Malectin_like | 5.8e-104 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g00403 | - | - | mtr:MTR_8g014700 | 1280.39 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu08g00403 | 08 | 3894941 | 3932252 | Tsu08g00403 | 08 | 3894941 | 3932252 | ECH |