Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00403 ATGGTGGCAATGTTACTGCATTTTCTTTCAGTATTGCTTGGTGTCCTTACAATTTTGGTTTTGATAGAAGCTCAAGAACCAGGATTCATTAGCTTAGATTGTGGTCTACCCGATGATTCTACCTATTCTGAGAAGAGTACAGGCATAAATTACATATCAGATGCCAAATTCATAGATACTGGTGTAAGTAAGAGGGTACAAGTCAATATTACGGTTAAACAGCAATTAGAATATGTGAGGAGTTTTCCTATTGGAGTGAAAAATTGTTACAGAATAGATGTAACAAATGGTACTAAATATTATATCAGAGCTTCTTTCTTTTATGGTAACTATGATGATTTAAATGATCCACCACAATTTGATCTTACTTTTGGAGCTAACGTTTGGGATACAGTGATATTCACCAATTTATCACGCATCACAACCAGCGAGATCATTTACACTCCATCAAAAGATTACATACAACCATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGCATCTGAACAAAGAAACTTATGTTTCATATTCAGaaaaatcaatattatcacTCTTCTTTCGGTTTGATGTAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCGTCTGGTTACCTTTTCAGTGGAATGAGATGAAACGATTAAGTACCAATGATGATCTATTAACTCAGAATATTTATAAACCACCAGCAATTGTTATGAGCACTGCTGTTACACCAGTAAATGACAGTGCCCCTgtacaatttaattttgatgCAGAAAATGTAAATCAACAAATCTACACATATTTGCACTTTAATGAGGTTGAGAAGCTTGCAGAAAATGAAACTAGAGCATTCAACATCACAGTGAATGGAGAGCTTTTGTATGAATTTGTGGTACCTGTATACCGGTCAGCAGATACCATATTTAGTCCAACACCGTTGACTGGagcaacaaaatatatatttacccTGTCTAAGACAGAGAGTTCAACCCTTCCACCCATCCTTAATGGCGTTGAGgtttataaagtaaaaaacTTCTCACAATCTGAAACTCAACAGGATGATGTTGAGACAATCACAAACATCAAGAATGCTTATGGAGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAAGTATATATGGGAAGGCCTAAACTGTAGTATTGATGATGGCAATAACCCACCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTCACTATGTTACAATACTTGGATTTATCAAACAATAGTTTAAACGGTCCTTTACCGGATTTTCTTACGCAACTGCAATCACTAAAAGTCATAAACGTGGGAAAGAACAACCTCACAGGGTTAGTTCCAAGTGAACTCCTTAAGAGATCAAAAGCAGGTTCACTATCACTGATCATGGAAGATAATCCTGGTCTTTGTACACCAGAATCAtgcaaaaagaaaaggaagaagaagaatttgtCTGTACCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCATAATTTCTCTTGGACTTTGGagattcaaaagaaaaaaagCTATGCCTACGTCTTCAAATTCTAAGAAAAAGGATTCCATGAAATCAAAACATCAAGCATTCAATTACACCGAACTTCTCAATATTACTGATAACTTCAAAACGATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTAGGCTCATTACAAGATCAAACTCGAGTCGCTGTTAAGAGACTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATattgtgatgaagatgaaatCAAAGCATTAATTTATGAATACATGGCAAATGGAAATCTCCATCAACACTTGTCAGTGGAAAATTCAAATATCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATGCCGCAAACGGATTGGATTATCTGCATAACGGATGTAAACCACCTATTATTCATAGAGATTTGAAACCTTCTAACATATTACTAGATGAAAACATGCATGCCAAGATTGCTGATTTTGGTATAAGTAGAGCTTTTGGTAATGATATTGATTCTAATATATCTACCTGCCCTGCCGGTACATTTGGTTACGTTGATCCAGAAGTTCAGAGAACAggaaacacaaataaaaagaatgatgTGTACAGCTTTGGGATAGTTCTATTTGTGTTAATCACTGGTCGTCAAGCAATAGTAAGAGCAGGTGGAGAAAACATTAACATACTTGAATGGGTTATTCCCATAATTGAAAGAGGAGATATTCAAAATGTTGTTGATCCAAGGTTGCAAGGCGAATTCAGTATCAATTCAGCATGGAAAATTGTAGAGATTGCTATGTCATGCATTTCGCCAAATGCAGTTGAAAGACCAGACATGAGCCAAATATTAGCAGAGTTAAAAGAATGTCTATCATTCGACATGGTTCAGAGAAACTATGGAAGCACACGAGCTATGGATGAATTGGTTTCTTTAGCTACTATATCTGAAACCACTGTTTTAGCTAGATAA 2622 0.3429 MVAMLLHFLSVLLGVLTILVLIEAQEPGFISLDCGLPDDSTYSEKSTGINYISDAKFIDTGVSKRVQVNITVKQQLEYVRSFPIGVKNCYRIDVTNGTKYYIRASFFYGNYDDLNDPPQFDLTFGANVWDTVIFTNLSRITTSEIIYTPSKDYIQPCLVNTGKGTPFISAIELRHLNKETYVSYSEKSILSLFFRFDVGSITNLEYRYKDDVYDRVWLPFQWNEMKRLSTNDDLLTQNIYKPPAIVMSTAVTPVNDSAPVQFNFDAENVNQQIYTYLHFNEVEKLAENETRAFNITVNGELLYEFVVPVYRSADTIFSPTPLTGATKYIFTLSKTESSTLPPILNGVEVYKVKNFSQSETQQDDVETITNIKNAYGVARNWQGDPCGPVKYIWEGLNCSIDDGNNPPRITSLNLSSSGLTGEIASSISNLTMLQYLDLSNNSLNGPLPDFLTQLQSLKVINVGKNNLTGLVPSELLKRSKAGSLSLIMEDNPGLCTPESCKKKRKKKNLSVPLIASFSALIVILIISLGLWRFKRKKAMPTSSNSKKKDSMKSKHQAFNYTELLNITDNFKTIIGEGGFGKVYLGSLQDQTRVAVKRLSPSSVQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEIKALIYEYMANGNLHQHLSVENSNILKWNERLNIAVDAANGLDYLHNGCKPPIIHRDLKPSNILLDENMHAKIADFGISRAFGNDIDSNISTCPAGTFGYVDPEVQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRAGGENINILEWVIPIIERGDIQNVVDPRLQGEFSINSAWKIVEIAMSCISPNAVERPDMSQILAELKECLSFDMVQRNYGSTRAMDELVSLATISETTVLAR 873
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00403 873 Gene3D Ribonuclease Inhibitor 365 485 IPR032675 -
Tsu08g00403 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Tsu08g00403 873 Pfam Protein tyrosine and serine/threonine kinase 570 837 IPR001245 GO:0004672|GO:0006468
Tsu08g00403 873 SUPERFAMILY L domain-like 380 479 - -
Tsu08g00403 873 Gene3D Transferase(Phosphotransferase) domain 1 644 856 - -
Tsu08g00403 873 SMART serkin_6 568 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00403 873 Gene3D Phosphorylase Kinase; domain 1 540 643 - -
Tsu08g00403 873 CDD STKc_IRAK 574 839 - -
Tsu08g00403 873 Pfam Malectin-like domain 32 352 IPR024788 -
Tsu08g00403 873 Pfam Leucine Rich Repeat 433 450 IPR001611 GO:0005515
Tsu08g00403 873 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Tsu08g00403 873 SUPERFAMILY Protein kinase-like (PK-like) 548 837 IPR011009 -
Tsu08g00403 873 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 20 870 - -
Tsu08g00403 873 ProSiteProfiles Protein kinase domain profile. 568 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00403 873 PANTHER OS07G0107800 PROTEIN-RELATED 20 870 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu08g00403 Tsu-Chr8 3894941 3932252 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00403 15 850 Receptor kinase-like Gene Family AT1G05700 45.205 0.0 748
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu08g00403 Malectin_like 5.8e-104 CL0202
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00403 - - mtr:MTR_8g014700 1280.39
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00403 08 3894941 3932252 Tsu08g00403 08 3894941 3932252 ECH