Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00400 ATGAACATGAATAGCAAAGAAACACTTGTTGTACTTTTAGTGTCTTTCTTATTCTTTTGTAGCTATGCACAAGACACACTTGTACCAGCTATCATAACATTTGGTGACTCTGCTGTAGATGTAGGGAATAATGACTATCTTCCTACTCTTTTTAAGGCTAATTACCCTCCTTATGGTAGAGACTTTGCTAATAAACAACCTACTGGGAGGTTTTGTAATGGCAAATTAGCTACTGATATTACAGCTGAAACACTTGGTTTTACGACATTTCCACCGGCATATCTTAGTCCACAAGCATCAGGGAAGAACCTCCTTATCGGAGCAAACTTTGCTTCAGCTGCATCTGGTTTTGATGAAAAGGCTGCTACATTGAATCATGCAATTCCATTGTCCCAACAGTTAAATTATTTCAAGGAATATCAAGGCAAGTTGGCTCAAGTTGCTGGCAGTAAAAAAGCTGCATCAATTATCAAGGATTCTTTGTATATATTGAGTGCTGGCAGCAGTGACtttctacaaaattattatgtcAATCCTTGGGTCAACAAATTAGTCACTGTTGATGAGTATTCAGCTTACCTACTAGATTCATTCAATAGCTTTGTTAAGGACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTTCCACCATTGGGTTGTTTACCTGCTGCAAGGACTTTATTTGGTGCCCATGAGAGTGGTTGTGTCTCAAGAATCAACACTGATATTCAAGGATTTAACAAGAAAGTCAACTCAGCTGcatcaaatcttcaaaagcaaTATTCTGGTCTTAAGATTGTGATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAAAAACCTGCAGATTTCGGTTTTGCTGAGGCAGGAAGAGGTTGCTGCGGTACAGGAACTGTAGAAACAACATTCTTGTTATGCAATCAAAAATCACCAGGAACTTGTTCAAATGCAACTCAGTATGTTTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTATAGCTGATGCTTTACTTCTACAAGGGATAGCTCTTATCACATAA 1062 0.3719 MNMNSKETLVVLLVSFLFFCSYAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFANKQPTGRFCNGKLATDITAETLGFTTFPPAYLSPQASGKNLLIGANFASAASGFDEKAATLNHAIPLSQQLNYFKEYQGKLAQVAGSKKAASIIKDSLYILSAGSSDFLQNYYVNPWVNKLVTVDEYSAYLLDSFNSFVKDLYGLGARKIGVTSLPPLGCLPAARTLFGAHESGCVSRINTDIQGFNKKVNSAASNLQKQYSGLKIVIFDIYKPLYDLVQKPADFGFAEAGRGCCGTGTVETTFLLCNQKSPGTCSNATQYVFWDSVHPSEAANQVIADALLLQGIALIT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00400 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Tsu08g00400 353 Pfam GDSL-like Lipase/Acylhydrolase 31 344 IPR001087 GO:0016788
Tsu08g00400 353 Gene3D SGNH hydrolase 19 348 IPR036514 -
Tsu08g00400 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 352 - -
Tsu08g00400 353 PANTHER GDSL ESTERASE/LIPASE EXL3 2 352 - -
Tsu08g00400 353 SUPERFAMILY SGNH hydrolase 31 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00400 Tsu-Chr8 3878531 3881078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00400 3 345 Pollen Coat Proteome AT1G75910 35.260 2.50e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00400 - - gmx:100815273 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05403 02 62581275 62583154 Tsu08g00400 08 3878531 3881078 PCT