Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00372 ATGAACATGCCTGTATTGCGTGGTGGAGCGCGCCGTGGTCGGCCACCGAAGAAAAACCAACAACCACCAAAGGAGAAAAATCCGGTTGAAGTGGAGGCGATTGCTACTAGAACGAGACGGCGACGTGCAGCTGCTGCTGCAGCGAACGATAAGGTTGAAGAGGAGCCAATTGCTGTTGCGTCGGGAAAGGAAGGAAATGAGAACATAATTGTCGCTGCAACGGCCAAGGGAGAGGAGGAGAATCGGGCATTGGAGGAAGCTGGTGAAGCTGAGAAGGAAGAGATTGGGGAGAAACAGATGGATGGAATTGATAATGGTGGTCATAGCAATGATAAGGCTGATGCTGGTGAAGAAGAAAGCAATGCCTTTGTTATTCCTGAAAAGGTTCAAGTAGGTGATTCTCCTTTGTATAAAACAGAGAAAAAACTTGGCAAGGGTGGATTTGGACAAGTATATGTTGGTCGGCGTGTTTCTGGTGGAAATTTGAGCCAGAGAATTGGACCTGGAGCTGTAGAGGTAGCAATAAAATTTGAGCACATAAGTAGTAAAGGATGTAACCATGGACCGCCAAATGAGTGGCACATCTACAACACCCTTGGTGGAAGTCATGGTGTGCCACAGGTACATTACAAGGGCAAGCAAGGTGACTATTACATCATGATCATGGATATTCTAGGACCTAGCTTGTGGGATGTTTGGAATACTAAGTCTCACACCATGTCAACTGAAATGGTTGCTTGTATTGCCATCGAAGCAATATCCATTTTGGAGAAGATGCACTCTCGAGGGTATGTACATGGAGATGTGAAACCGGAAAATTTTCTGCTTGGCGCTCCTGGGACAGTGGACGAGAAAAAATTGTTCCTGGTGGATCTTGGATTAGCTACTAAATGGCGGGATAGTACAACCGGTTTACATGTGGACTATGACCAAAGGCCTGATGTTTTCAgGGGCACAGTCCGCTATGCAAGTGTGCATGCACATTTGGGGAGAACTGGAAGCAGGAGGGATGATTTGGAATCTCTTGCATATACACTGGTTTTTCTTCTTCGAGGTCATCTTCCTTGGCAAGGATATCAGGGAGAAAACAAGGGATATCAGGTTTGCAGGAAGAAGATGGGAACGCCTCCAGATACCCTATGTTGTTTTTGTCCCCAGCCTTTTAAACAGTTTGTTGAACATGTAGTGAACTTAAAGTATGATGAAGAGCCGAGTTACGCAAAATACATTTCTCTCTTTGATGGGATTATTGGTCCAAACCCAGATATTAGGCCACTTAATACAGAAGGTGCACAACAGCTTGTTGGTCATAAAAGAGGCCGGCTGGCTatagaagatgatgatgaacaaccCAAAAAGAAGGTTCGAATGGGCGTGCCAGCGAACCAGTGGATTAGTGTTTACAATGCTCGTAGACCGATGAAACAAAGATATCACTACAATGTGTCAAGTACAAGATTATCGCAGCACATTGACAAGGGAAACGAGGATGGTTTATATATTAGCAGTGTTGCTTCATCTCAGGGCCTATGGGCCTTAATTATGGATGCCGGGACAGGTTTCACTTCCCAAGTTTATGAACTCTCCCCCCAATTTTTCCATAAGgaatggATCATGGATCAGTGGGAAAAAAGTTACTATATCAGTGCAGTTGCAGGAGTTGCAAATGGGAGTTCATTGGTAGTAATGTCTAAAGGCACCCAATATTCGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTTAAATGGATAAACAAAAAGTGGAGAGAGGGCTTTTTTGTAACCTCAATGGCCACAGCAGGTCCCAAATGGGGAGTAGTTATGTCTCGTGGCGCAGGGTTTTCAGAACAGGTAGTCGAACTAGATTTTCTTTATCCTAGTGAAGGGATTCACAAGCGGTGGGAGAATGGATACCGAATCACATCGACTGCTGCAACCCGAGACCAAGCTGCTTTTGTTCTGAGTATTCCAAGGAAGAAGCCACTAGACGAAACTCAGGAAACGCTAAGGACTACTGCTTTTCCTAGTACACATGTTAAGGAGAAATGGGCGAAAAACCTCTACATTGCCTCTATTTGCCATGGACGTACCGTCTCTTGA 2103 0.4422 MNMPVLRGGARRGRPPKKNQQPPKEKNPVEVEAIATRTRRRRAAAAAANDKVEEEPIAVASGKEGNENIIVAATAKGEEENRALEEAGEAEKEEIGEKQMDGIDNGGHSNDKADAGEEESNAFVIPEKVQVGDSPLYKTEKKLGKGGFGQVYVGRRVSGGNLSQRIGPGAVEVAIKFEHISSKGCNHGPPNEWHIYNTLGGSHGVPQVHYKGKQGDYYIMIMDILGPSLWDVWNTKSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGAPGTVDEKKLFLVDLGLATKWRDSTTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGHLPWQGYQGENKGYQVCRKKMGTPPDTLCCFCPQPFKQFVEHVVNLKYDEEPSYAKYISLFDGIIGPNPDIRPLNTEGAQQLVGHKRGRLAIEDDDEQPKKKVRMGVPANQWISVYNARRPMKQRYHYNVSSTRLSQHIDKGNEDGLYISSVASSQGLWALIMDAGTGFTSQVYELSPQFFHKEWIMDQWEKSYYISAVAGVANGSSLVVMSKGTQYSQQSYKVSDSFPFKWINKKWREGFFVTSMATAGPKWGVVMSRGAGFSEQVVELDFLYPSEGIHKRWENGYRITSTAATRDQAAFVLSIPRKKPLDETQETLRTTAFPSTHVKEKWAKNLYIASICHGRTVS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00372 700 Pfam Protein kinase domain 137 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00372 700 MobiDBLite consensus disorder prediction 1 120 - -
Tsu08g00372 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Tsu08g00372 700 SMART serkin_6 137 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00372 700 SUPERFAMILY Protein kinase-like (PK-like) 137 419 IPR011009 -
Tsu08g00372 700 Gene3D Transferase(Phosphotransferase) domain 1 103 455 - -
Tsu08g00372 700 PANTHER CASEIN KINASE-RELATED 86 674 - -
Tsu08g00372 700 MobiDBLite consensus disorder prediction 78 118 - -
Tsu08g00372 700 ProSitePatterns Protein kinases ATP-binding region signature. 143 176 IPR017441 GO:0005524
Tsu08g00372 700 CDD STKc_CK1 137 413 - -
Tsu08g00372 700 MobiDBLite consensus disorder prediction 18 49 - -
Tsu08g00372 700 ProSiteProfiles Protein kinase domain profile. 137 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00372 700 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 86 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00372 Tsu-Chr8 3637548 3643984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00372 137 295 EF-hand Containing Proteins AT4G36070 29.448 7.35e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tsu08g00372 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00372 - - gmx:100799630 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00372 08 3637548 3643984 Tsu08g00372 08 3637548 3643984 ECH