Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00358 ATGAATTTATCAGCTATGCCGAAAGCATTCTTAAACCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTATGATCAACAATAATTCTACCTCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTGAAGAGCATGAAGCTCTCAAAACCTCCCCTGGTTACATTTCATCAATACAAGATTTACCCTTGAAGCTTCACACAACACACTCACCTCAATTCCTTGGTCTTAATCCCTATAAAGGAGCATGGCAAGCCTCTGATTTCGGCAAAGACGTCATTGTTGGTATCATTGACACGGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAAGGGAATGACTAAAATTCCTTCAAAATGGAAAGGCAAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGTAACAAGAAACTCATTGGAGCCAGGTACTTTAATAAAGGATTTTTGGCAAAATATTCAAACATTAGTAGAACAATTGTGAACACGACACGTGACATAGTTGGTCATGGGACCCTAACTTCATCAATAGCAGCCGGAAGCAGAGTACATGATGCATCTTTTGTTGGTTTAGCAAATGGAACAGCAACAGGTATAGCTTCATTGTCTAGACTAGCCATTTACAAGGTTGTGTGGGGAACAGATGAAGTTGCATCTGATATAATGGCTGGAATTGATGCCGCAATATCAGATGGTGTTGATGTTCTTTCAATGTCATTAGGCTATAACAAAAATGTGCCTTTCTATGAAGATGCTATTGCTATAGCAACATTTGCAGCAATGGAAAAAGGTGTTTTTGTGTCTGCTCCAGCCGGTAATGAGGGACCTTCCTTTAATACTATAAGCAATGGAATACCATGGGTGACAACTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGGTAATGGAGTCTCACTCATTGGATACTCTTTTTATCTTGGTAACCTCTCCGCTAGTAATTTTCCAATTGTTTTCATGGGTACGTGTGACAACATTAAAGAACTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAAGATAAGAATGGaacttttcttaattttgttaaactaattaataatgTGGGTGGAGCAAAAGTAGTTGGAAGTGTTATCATAACAAACAGATCAAATACCGACGAATTTGAATTCTCATATGTGCTCCCGTCCATCATTATTAACCCAAAAGATGGAGAGATTGTCAAAGATTTCATCAAGAGAACTTCTGGTAGTGGTTTAATTGCAAAAATGGCTTTCAAGATAACATCTTTAGGTGATAAACGAGCGCCTAGTGTGGATTCTTATAGTTCAAGGGGACCTTCAAAGAATTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCTACAAATATTCCTGTGTTGGATTATAACTCTTATAATTTTGGATATTATAAACTCTTCAACAAGTTCAAGTTTGCTTCTGGCACATCTATGTCATGTCCTCATATTGCTGGTGTCGCAGCGCTTTTAAAAGGCGCGCACAGTGATTGGAGCCCTGCAGCTATTCGATCAGCAATAATGACAACATCAGACATATTTGATAAAACTAAGGAACACATCAAAGACATTGGCACAGGTAACAAAGCAACACCTCTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATATTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTGCCATTACAAGATCATCTGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGGAATTCTTCAAAGACAACACAACATTTTCACAGAACAGTTACCAATGTTGGTGAAGGACAAACAACTTATGTTGCTAGCATTACACCAAATAAAAGGTTTCGTATCAACGTTATCCCAAATAAGTTGGTGTTCAAGCAGAAGAACCAGAAGATAAGCTATAGGTTGAGCATTGAAGGTCCAAGAATGATACAAAAGAATAAAGTATCTTTTGGATATCTTACTTGGAAGGATGAGAAGCATATAGTCAGGAGTCCTATTGTTGTAACCACCCCCAGTTTCAATTTATAG 2199 0.3688 MNLSAMPKAFLNQHSWYESTLSQVTPMINNNSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPGYISSIQDLPLKLHTTHSPQFLGLNPYKGAWQASDFGKDVIVGIIDTGVWPESESFNDKGMTKIPSKWKGKLCQFENTNNSSLCNKKLIGARYFNKGFLAKYSNISRTIVNTTRDIVGHGTLTSSIAAGSRVHDASFVGLANGTATGIASLSRLAIYKVVWGTDEVASDIMAGIDAAISDGVDVLSMSLGYNKNVPFYEDAIAIATFAAMEKGVFVSAPAGNEGPSFNTISNGIPWVTTVAASTLDREFHGNLTLGNGVSLIGYSFYLGNLSASNFPIVFMGTCDNIKELIKVKSKIVVCEDKNGTFLNFVKLINNVGGAKVVGSVIITNRSNTDEFEFSYVLPSIIINPKDGEIVKDFIKRTSGSGLIAKMAFKITSLGDKRAPSVDSYSSRGPSKNCPYVLKPDITGPGTSILAAWPTNIPVLDYNSYNFGYYKLFNKFKFASGTSMSCPHIAGVAALLKGAHSDWSPAAIRSAIMTTSDIFDKTKEHIKDIGTGNKATPLALGAGHVNPNRALDPGLVYDIGVQDYVNLLCALNFTQKNITAITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPNKRFRINVIPNKLVFKQKNQKISYRLSIEGPRMIQKNKVSFGYLTWKDEKHIVRSPIVVTTPSFNL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00358 732 Pfam Fibronectin type-III domain 624 725 IPR041469 -
Tsu08g00358 732 Pfam Peptidase inhibitor I9 10 78 IPR010259 -
Tsu08g00358 732 Gene3D - 597 728 - -
Tsu08g00358 732 PANTHER PUTATIVE-RELATED 1 729 - -
Tsu08g00358 732 SUPERFAMILY Subtilisin-like 77 584 IPR036852 GO:0004252|GO:0006508
Tsu08g00358 732 Pfam Subtilase family 101 551 IPR000209 GO:0006508|GO:0008236
Tsu08g00358 732 Gene3D Peptidase S8/S53 domain 103 593 IPR036852 GO:0004252|GO:0006508
Tsu08g00358 732 CDD Peptidases_S8_3 75 546 IPR034197 -
Tsu08g00358 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 729 IPR045051 -
Tsu08g00358 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 78 IPR037045 -
Tsu08g00358 732 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Tsu08g00358 732 PRINTS Subtilisin serine protease family (S8) signature 179 192 IPR015500 -
Tsu08g00358 732 PRINTS Subtilisin serine protease family (S8) signature 509 525 IPR015500 -
Tsu08g00358 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 510 520 IPR023828 -
Tsu08g00358 732 Gene3D - 310 444 - -
Tsu08g00358 732 ProSiteProfiles Serine proteases, subtilase domain profile. 74 580 - -
Tsu08g00358 732 CDD PA_subtilisin_like 316 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00358 Tsu-Chr8 3463317 3465515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00358 1 715 Subtilisin-like Serine Gene Family AT5G67090 43.073 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00358 - - gmx:100786751 902.508