Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00347 ATGGGAAAAATGATGAGTGTTTCATTAGTTTTACTTCTCATTGTTGTTGTGACAATTATGAATGGCTATAAAGTTGAGGCCCAGGATGCAGATTTACGTGAGGAATGTGCACGAGTGAGAGAACAATGTCTTGGTGATCCAGGTGGATTCTTTTGTATTATGTACTGTCACAATTGTCCATATCGACCTCCATATGATCCACTCTGCCCAGGATTTTTCAGCCCAATAAATTCAACAAACCGTTACCTAGGAATTTGGTACATCAATGAAACAAACAACATATGGATTGCAAACAGAGATCAACCTCTTAAAGATTCATCAGGAATAGTCACAATTGACAAACATGGAAATCTTGTAATATTGAACAATCAAAATGGAACCATCATTTGGAcaacaaatatttcaaatagTTCAACAAATTCAACAGCTCAACTTAATGATTTAGGAAACTTGATTCTAAGTGACATCAATTCTGGAATAACACTTTGGGATAGTTTCTCACATCCAGCAGATGCAGCTGTTCCAACAATGAGAATTTCTACTAATAAAGTAACAGGTAAGCAAATAGCTTTTGTTGCAAGAAAAAGTGACAATGATCCTTCTTCAGGACCATTTTCAGCTAGTATTGAAAGATTGGCTGCACCAGAAGTTTTTATTTGGCATGGAAAAAATATTCATTGGAGAACTGGTCCATGGAACGGAACAGTTTTTCTCGGATCGCCAAGAATGTTAACCTTGTATTTATCCGGTTGGCGTTTAGTTCCGGACGATGATGAAACTTATTTAACTTACAATTTCAACGACAAAACTATGTTTGGAATTCTCTCATTGACACCACATGGAAAACTTAAGTTGGTTGAATATAAGAATAAAACAgtaattgttaatattactgTTGGTCAAAATGATTGTGATATATATGGAAAATGTGGACCCTTTGGGAATTGTGATAATTCTAGTGTACCAATTTGTAGTTGTTTTGAGGGTTTTGAGCCAAAGAATTTGTTTGAATGGAGTTCAAGTAATTGGACTAGTGGGTGTGTGAGGAGTGAAAGATTTAACTTGAAGTGTGAGATGTTGAAGAAGAATGGATCAAGTGAAGTGAAACAAGATGATTTTTCAgtgaaaaataatatgaaagtTCCTGATTTTATTGAGAGATCAGAtagtaatcaaaataagtgTGCAAAAGATTGTTTGGCAAACTGTTCTTGTTTGGCACATGCATACGATCCTAACATAGGTTGTATGTATTGGAGTCGAGAGTTAATTGATTTGCAGAAATTTCCTTATGGAGGAGTTAATCTCTACATTCGTGTACCGGCGGAACTAGGAGCATTTACCATGGTTATATGTGCTTATCTTTTGTGGAGGAAATGTTCTGCTAGACATAGAGAAAGACACCCTCAAAACTCGATTATCAGAGGacaaaatcaaatgaaattgGATGAACTACCACTATATGATTTCAAAAAGCTTGAAACTGCCACAAACAGTTTTCACATTGGTAATATGCTTGGGAAGGGAGGTTTTGGCCCAGTATACAAGGGAATAATGGAAGATGGTCATGAAATTGCGGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATACAAGAATTCATGAATGAAGTATTAGTGATTTCAAAACTTCAACATCGAAATCTTGTGAGACTTCTTGGTTGTTGTGTTGAAAGGGGCGAGCAAATATTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATTCCTTTCTCTTTGatccactacaaaagaaaattttagaTTGGAGAAAGAGGTCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCATAGAGACTCGAGACTAAGGATCATACATAGAGATTTGAAAGCAAGCAACATCTTACTTGATGGCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGgtggagaagaagatgatgaagctAACACAAACAGAGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGggacttttctctgagaaatcAGACGTCTATAGCTTTGGGGTTTTATTGCTAGAGATTGTTAGCGGAAGAAGAAATAGTAGCTTTTATAACAACGAGGATTCTCTTAGTCTTGTAGGCTTTGCATGGAAGCTATGGTTAGAAGACAACATTATATCTCTAATAGATCCAGAAGTATGGGATGCATGCTTTGAAAGCAGCATGTTGAGGTGCATACACATAGGACTTCTCTGTGTGCAAGAACTTCCAAAAGAAAGACCAAATATATCAACTGTTGTTTTAATGCTTATAAGTGAGATTACGCATCTTCCTCCTCCCGGGAAAGTTGCATTTGTTTACAAGCAAAATCCAAGAAGTACACAATCTTCTCAAAAAAGTAATCAATCTAACTCGAACAACAACGTAACTCTAAGTGAAGTTCAAGGCAGATAA 2463 0.3435 MGKMMSVSLVLLLIVVVTIMNGYKVEAQDADLREECARVREQCLGDPGGFFCIMYCHNCPYRPPYDPLCPGFFSPINSTNRYLGIWYINETNNIWIANRDQPLKDSSGIVTIDKHGNLVILNNQNGTIIWTTNISNSSTNSTAQLNDLGNLILSDINSGITLWDSFSHPADAAVPTMRISTNKVTGKQIAFVARKSDNDPSSGPFSASIERLAAPEVFIWHGKNIHWRTGPWNGTVFLGSPRMLTLYLSGWRLVPDDDETYLTYNFNDKTMFGILSLTPHGKLKLVEYKNKTVIVNITVGQNDCDIYGKCGPFGNCDNSSVPICSCFEGFEPKNLFEWSSSNWTSGCVRSERFNLKCEMLKKNGSSEVKQDDFSVKNNMKVPDFIERSDSNQNKCAKDCLANCSCLAHAYDPNIGCMYWSRELIDLQKFPYGGVNLYIRVPAELGAFTMVICAYLLWRKCSARHRERHPQNSIIRGQNQMKLDELPLYDFKKLETATNSFHIGNMLGKGGFGPVYKGIMEDGHEIAVKRLSKASGQGIQEFMNEVLVISKLQHRNLVRLLGCCVERGEQILVYEFMPNKSLDSFLFDPLQKKILDWRKRSNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGDMIPKISDFGLARIVKGGEEDDEANTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYNNEDSLSLVGFAWKLWLEDNIISLIDPEVWDACFESSMLRCIHIGLLCVQELPKERPNISTVVLMLISEITHLPPPGKVAFVYKQNPRSTQSSQKSNQSNSNNNVTLSEVQGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00347 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 69 819 - -
Tsu08g00347 820 Pfam Protein tyrosine and serine/threonine kinase 501 770 IPR001245 GO:0004672|GO:0006468
Tsu08g00347 820 CDD PAN_AP_plant 363 441 - -
Tsu08g00347 820 Pfam D-mannose binding lectin 94 195 IPR001480 -
Tsu08g00347 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 69 819 - -
Tsu08g00347 820 Gene3D - 70 167 IPR036426 -
Tsu08g00347 820 SMART blect_4 51 169 IPR001480 -
Tsu08g00347 820 SUPERFAMILY Protein kinase-like (PK-like) 485 806 IPR011009 -
Tsu08g00347 820 SMART serkin_6 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00347 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Tsu08g00347 820 Pfam S-locus glycoprotein domain 227 334 IPR000858 GO:0048544
Tsu08g00347 820 CDD B_lectin 71 169 IPR001480 -
Tsu08g00347 820 PIRSF SRK 69 446 IPR024171 GO:0004674
Tsu08g00347 820 PIRSF SRK 434 820 IPR024171 GO:0004674
Tsu08g00347 820 ProSiteProfiles PAN/Apple domain profile. 357 441 IPR003609 -
Tsu08g00347 820 MobiDBLite consensus disorder prediction 795 820 - -
Tsu08g00347 820 ProSiteProfiles Protein kinase domain profile. 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00347 820 SMART ntp_6 368 440 IPR003609 -
Tsu08g00347 820 Gene3D Transferase(Phosphotransferase) domain 1 576 779 - -
Tsu08g00347 820 Gene3D Phosphorylase Kinase; domain 1 474 575 - -
Tsu08g00347 820 Pfam PAN-like domain 369 426 IPR003609 -
Tsu08g00347 820 ProSiteProfiles Bulb-type lectin domain profile. 52 166 IPR001480 -
Tsu08g00347 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 234 IPR036426 -
Tsu08g00347 820 CDD STKc_IRAK 506 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00347 Tsu-Chr8 3365939 3371876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00347 432 809 Receptor kinase-like Gene Family AT4G23190 51.706 1.01e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu08g00347 PK_Tyr_Ser-Thr 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00347 - - mtr:MTR_8g013600 1149.81