Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00340 ATGGCGCTAAAAGGTCGATGgcacaaaaaaattaatcccTCTGTCCAAAAGTTTGTTGGGTGCTACAAACAAGCTATTGCCGTAAAGAAAAGTGGTAGCTCCGAGAGCGACATCGTTTCAGCAGCATGTGATATTTATTATCAAGACGGGCATGAAAATTTCACATTTCAGAATGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCGTCGGAACCGTCGGCAAACCCACAGTTATGCTTGAAGCAGTTGCTTCACAAGACTTATGGATTTGGCACGCTTTTTTTTGGGGTAGAGGGCTCAAACAACGATATCAATGTGCTGAACCAATCTGATATCTTCAACGATGTTATGCAAGGGCGAGCTCCTGAGGTCCATTTTTCAGTCAATCAACATGAATACAACATGGGCTATTATCTATCAGATGACATTTATCCTGAGTGGGCTACATTTGTGAAAAGCATTCCAATGCCACAAGGGGATAAGAGAAAATTGTTTGCTCAACATCAAGAAGGCGCGAGAAAGGATATTGAACAAGCATTCGGAGTTATCCAATCCCAAATTGCGATCATACGTAACCCGGCTCGATCTTGGCACTTGGATGCACTCAAACGTATAATGGAGACGTTCATCATATTGCACAACATGATTGTTGAAGATGAACGTGCCAGATATGGTGGCACTTTTGATTATTCATATGATCATTTGGGTAATGATCCGATTGCACCACCAAATGATTCTAATAATGATTTCCAAGAGTTCCTACGTAGAAGACATAACATTCGCGATAAGCAAATTCATCGACACCTTCAGCAAGACTTGATAGAACACATATGGGAACGTTTTGGACATGAGAATAACCACAATTAG 879 0.4039 MALKGRWHKKINPSVQKFVGCYKQAIAVKKSGSSESDIVSAACDIYYQDGHENFTFQNAWKLLRDEPKWLGGSSEPSANPQLCLKQLLHKTYGFGTLFFGVEGSNNDINVLNQSDIFNDVMQGRAPEVHFSVNQHEYNMGYYLSDDIYPEWATFVKSIPMPQGDKRKLFAQHQEGARKDIEQAFGVIQSQIAIIRNPARSWHLDALKRIMETFIILHNMIVEDERARYGGTFDYSYDHLGNDPIAPPNDSNNDFQEFLRRRHNIRDKQIHRHLQQDLIEHIWERFGHENNHN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00340 292 PANTHER UNCHARACTERIZED 106 276 IPR045249 -
Tsu08g00340 292 PANTHER HARBINGER TRANSPOSASE-DERIVED PROTEIN-RELATED 106 276 - -
Tsu08g00340 292 Pfam Plant transposon protein 94 226 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00340 Tsu-Chr8 3306246 3307124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00340 6 69 Glutathione S-transferase Gene Family AT5G41240 46.875 3.89e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00340 - - ccaj:109793646 253.062